Oncorhynchus kisutch (coho salmon): 109889354
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Entry
109889354 CDS
T09179
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109889354
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109889354
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
109889354
NCBI-ProteinID:
XP_020336315
Ensembl:
ENSOKIG00005018247
LinkDB
All DBs
Position
LG4:complement(29617508..29648705)
Genome browser
AA seq
1827 aa
AA seq
DB search
MMKNKNKKQEDEGSTQSNASSNSASEESNHSGLESGSQSESEQGRERRRLHHSGESNSSS
ESGSQSGSESESQQALAEVKDRQPVKKKDNLSDVKKMWEEHPDVYGVRRSNRSRQEPARL
NIGAGGSSDSEGESPKRKAPRQKKKENTWKSDESDDDDDDEDDDDEEAASSADSEQEEKK
VRSRRLPARRPKNKSSTVKKQQPPKGRKTRKQESSVEEDDDDDDDDDDDDDDEDTPKRQT
RRRVSAKVSYKEDQNDFETDSDDLIEMEGAEVEPEDDSETIEKIMDTRTGKKGACGASTT
QYAVEENGDPGADFDPEKDEGEIHYLIKWKGWSYIHNTWESIESLTQQKVKGLKKLDNFK
KKNDELSAWLSKASPEDSEYYNCQQELTTDLNKQFHILERVIATKTGKTQGLSDFPSHSH
KNGASSNEPEYLCKWMGLPYSECSWEDGALLGKKFQHCIDGFTNRNSSKTVPSKDCKVSE
VLKQRPRFVALKNQPSYIGDENLQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQT
ISFLSYMFHQHQLYGPSLVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKSIRDYEW
VCHQTKRIKFNALITTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIEFRSN
HRLLITGTPLQNSLKELWSLLHFLMPDKFENWEDFESEHGKGTDNGYQSLHKVLEPFLLR
RVKKDVEKSLPAKVEQILRVDMSAVQKQYYKWILTRNFRALQKGTRGSSSGFLNIVMELK
KCTNHGFLIKQPEEECDTPQEHLQALVRGSGKLVLLDKLLTRLRDRGNRVLIFSQMVRML
DILAEYLALKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASAD
TVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVI
QRMDTTGRTVLDNNSGNSNSNPFNKDELTAILKFGAEDLFKEAEGEETEPTEMDIDEILR
LAETRESDQGSSATDELLSQFKVANFSNMEESAPEMVERMVPDWDDIIPEDQRRRLEEEQ
KQKEMEDIYMLPRSRSSNKRAQANDSDSDVGSKLKHRSSGSESETDDSGDDKKPKRRGRP
RARKNNVEGFTDAEIRRFIKAYKKFGAPLERLEGIARDSELVDKSQADLKRLGELIHSSC
VTAVQEHEEHLRENPSEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPANPT
ERNQFQLTCRVKVPHFDVDWDLQDDTQLLLGVYEHGYGNWDLMKTDPELKLADKILPDDP
EKKPQGKQLQARSDYLLKMLKKEADCKDVTKEEAKVKKRKPRVKKENKAPKDEQGNDISS
PRMSDNPSEEGEVRDDGTEKTPTKKRQKKKDNKENKEKHGTPKKEKDADKDKKRPKPRKE
KAKGAKGKKPQGPVHITAGSDPVPIGEEDDELDQENFSICKERMRPVKKALKQLDKPDEG
LSVQEQLQHTRTCLLKIGDRITECLKAYSDPEHVKTWRRNLWIFVSKFTEFGARKLHKLY
KMAQKKRSREEEKEHRKKGDDPSGRKKTFRAEASGSSRDSTGTQPSSKSHPGMPHPSPTS
PHGPHREGYNQSNKRHFGNDDRGDWQRDRKYNYPGNSNQPWQSERHHPYDAHRYKDHHYG
DRRPREDSYRSSSSSYRSGGSSSSPRKRPYDQYDSDREHRDRRAYYDRHPDSKRRRGDDF
RPPQDFRGSGGHPQDFRVRMPEHRGPPGPAGPEHFTRPYPDNKPPPLLDPRSPQPQKSPQ
DSRSPTAERTAEQKAAAADLNWNNRKT
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagaataaaaagcaagaagatgaaggttcgactcaaagcaatgcatca
agcaattcggcctcagaagaatcgaaccactctgggttggagtctgggagtcagtcggag
agtgagcagggcagggagaggagaagattgcaccactcaggagagtccaacagctcttct
gaatctgggagccagtccgggtctgagagtgaatcccagcaggccttggcagaggtcaag
gacagacaaccagttaaaaagaaagacaatctgtcagatgtgaagaagatgtgggaagag
catccagatgtctatggggtcaggcgatcaaatcgcagtagacaagaacctgctcgtctc
aatattggagctgggggtagcagtgactccgaaggtgaaagtcctaaaagaaaagcacca
cgacagaagaagaaagaaaatacctggaaaagtgatgaatcggatgatgatgatgatgat
gaggatgatgatgatgaggaggctgccagcagtgcagacagtgagcaggaagagaaaaaa
gttagatccagacgacttcctgctagaagaccaaagaacaaatcatctacagtcaaaaaa
cagcagcctccaaagggaaggaaaaccaggaaacaagagtcatctgtggaggaagatgat
gacgacgacgacgatgatgatgatgatgatgatgacgaagataccccaaagagacaaacc
cggcgaagggtgtctgctaaagtcagttacaaggaggaccaaaatgactttgagactgac
tctgacgacctgatagagatggagggagctgaggtggagccggaagatgacagcgagacc
attgagaagatcatggataccaggacaggcaaaaaaggagcctgcggggcttccactacc
cagtatgctgttgaggaaaatggggacccaggagccgactttgacccagagaaggatgag
ggagagatccattatctgatcaagtggaaaggctggtcctacatccacaacacctgggag
agcattgagtccctcactcaacagaaggtcaagggactcaagaaactagataacttcaag
aagaagaacgatgagctcagtgcttggttgagcaaagcatcccctgaggattcagaatat
tacaactgccagcaagagctaaccactgatttaaataagcagttccatattctggagaga
gtcattgcgactaaaaccgggaagacacagggtctctcggattttccttctcacagccac
aagaatggtgcttcttccaatgagccagagtacctgtgtaagtggatgggcctgccttat
tcagagtgcagctgggaggatggagctctgctggggaagaagttccagcactgtatagac
ggcttcaccaacaggaactccagtaaaacagtcccctcaaaagactgcaaagtgagtgag
gtgttgaaacagaggcccagatttgttgcactaaagaaccagccatcgtacattggggat
gagaacctgcagctgagagattaccagttagatggactgaactggctggctcactcctgg
tgcaggtgcaatagtgtgatcctggctgatgagatgggtctggggaaaaccatccagacc
atctcgttcttgtcctacatgttccaccagcaccagctgtatgggccctccctggtggtg
gtacccctatccaccctcacctcctggcagagagagtttgacacctgggcccccgatatg
aacgtggtggtctacttgggagacgtgatgagcaggaaatcgatccgtgactatgagtgg
gtatgccatcagacgaagagaataaagttcaatgcacttataaccacgtatgaaattcta
ctgaaagacaagggggtgttggggaacataaattgggctttcttgggtgtggatgaagct
cacaggctaaagaatgacgactccctgttgtacaaaaccctgatcgagttccggtccaac
cacagacttcttatcacagggacaccactgcagaactctctcaaagagctgtggtccctt
ctgcacttcctcatgcctgacaagtttgaaaattgggaagattttgaaagtgagcatggt
aaagggactgacaatggctaccagagccttcacaaagtccttgagcccttcctcctgagg
cgtgtaaagaaggatgtggagaaatccctgcctgccaaggtagaacagatcctccgtgtg
gacatgtctgctgtgcagaagcagtactacaagtggattctgaccaggaacttcagagcc
ctgcagaaaggcacccgaggcagctcctctggcttcctcaacatcgtcatggagctgaag
aagtgcactaaccatggtttcctcatcaaacagcctgaggaagagtgtgacactccacag
gagcacctgcaggcattggtgaggggcagtgggaagctggttcttctggacaagctactg
accagacttcgggacaggggcaacagagtcctcatcttctcccagatggtgcgcatgttg
gacatcctggctgagtacctggccctgaagcgctacccattccagcgcctggatggctcc
ataaagggagaaatacgaaaacaagcacttgaccactttaatgctgaaggttctgaggac
ttctgtttcctgctgtccacaagagctggaggtttgggtatcaaccttgcctctgcagac
actgtggtcatctttgactctgactggaaccctcagaacgacctgcaggctcaggccagg
gctcacaggattggccagaagaagcaggtgaatatctatcgcttggtcacaaagggatct
gtggaggaggacattattgagagagccaagaagaagatggttttggaccatcttgtaatt
cagagaatggacaccactggtcgaactgtattggataacaactccggaaattcaaactcc
aacccattcaataaagatgagctgactgccattctgaagtttggagctgaagatctgttc
aaagaggcagaaggagaggagactgaacctacggagatggatattgatgagatcttgcgg
ttggctgaaaccagagaaagtgaccagggatcaagtgccacagatgagcttctctctcag
ttcaaggtggccaacttctcaaacatggaggagagtgctccagagatggtggagcggatg
gtgcctgactgggacgacatcatcccggaggaccagcggcggaggctggaggaggagcag
aagcagaaggagatggaggacatctacatgctgcctagaagcaggagctccaataagagg
gcccaagccaacgacagtgacagtgacgttggctccaagctgaagcaccgctcctcgggc
tccgagagcgagacggacgacagcggcgatgacaagaagccaaagaggagaggcaggccc
agagcccgcaagaacaacgtggagggttttactgatgcagagatccgcaggttcatcaag
gcttataagaaatttggagctccgcttgaaaggctggagggcattgccagggactcagag
ctggtggacaaatcccaggcagacctgaagagactgggcgagctgatccatagcagctgt
gtgacggctgtccaagagcatgaagagcacctcagagagaatcccagtgaagccaaaggc
cctgggaagcgcagaggtattaacatcaagatctcaggagtgcaggtcaatgccaagtcc
atcattcagcacgaggaggagtttgagccactgcacaaagctgtgccagctaatcctact
gagagaaaccaattccaactgacctgcagagtgaaggtgcctcactttgacgtggactgg
gatctgcaggatgacactcaactgttgctgggggtctatgagcatggctacggaaactgg
gatctgatgaagaccgaccccgaactcaaactcgcagacaagattctcccagatgaccca
gagaagaaacctcaagggaagcagttgcaggccagatcagactaccttctgaagatgctg
aagaaagaagcggactgtaaagatgttactaaggaggaggccaaagtgaagaagaggaag
cctcgggtgaagaaagagaacaaggcccctaaagatgaacagggcaatgacatctcctcc
ccccgcatgtcagacaacccctcagaggaaggggaggtgagggatgacgggactgaaaaa
actcccacaaagaagaggcagaagaaaaaggataacaaagagaacaaagaaaaacacgga
actcctaaaaaagagaaggacgcggacaaagacaaaaaacgtccaaagccaagaaaagaa
aaggcaaaaggagctaaagggaagaagccccaggggccggtccacattactgctgggagt
gaccctgttcccatcggagaggaggacgatgagctggaccaagagaacttcagcatttgt
aaggagcgcatgaggccggtgaagaaggccctaaaacagctggataagcctgacgagggc
ctgtctgttcaggagcagctccaacacacacgcacctgcctgctgaagataggagaccgc
atcactgagtgccttaaagcctacagcgacccagagcatgtcaaaacatggcgtcggaac
ctctggatttttgtgtctaagttcacagaatttggagcgaggaagcttcacaagctgtac
aagatggctcagaagaagcggtctcgggaggaggagaaggagcatagaaaaaagggggat
gacccgtcaggcaggaaaaagactttccgagcagaggcgtctggttccagtcgagactcc
accggcacccagccatcatccaagtctcatccaggcatgccccacccctctccaacgtcc
ccccatggtccccacagagaaggctacaaccagtccaacaagcgacactttggaaatgat
gatcgaggagattggcagcgagatcgtaaatacaactaccctggaaatagcaaccagccc
tggcaaagcgagcggcatcatccatatgacgcccatcggtataaggaccatcactatggt
gaccgtcgtccgcgtgaagactcctaccgcagcagctctagtagttaccgtagtggcggt
agcagcagctcccctcggaagaggccgtatgaccagtatgacagcgaccgagaacacagg
gaccgtcgtgcctattacgacagacatccagactcaaagcggagacgcggcgatgacttc
cgtcctccccaagacttcagggggagtggaggccatccccaagacttcagggtgaggatg
ccagagcatagggggcccccggggccagcagggccagaacacttcacccggccctatcca
gacaacaaacccccccccctgctggacccacgctccccacagccgcagaagtccccccag
gactcgcgctcgccaactgcagagcggactgcagagcagaaagcagctgcggctgattta
aactggaacaacaggaagacatga
DBGET
integrated database retrieval system
