Oncorhynchus kisutch (coho salmon): 109889366
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Entry
109889366 CDS
T09179
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
oki03015
mRNA surveillance pathway
oki03040
Spliceosome
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109889366
09122 Translation
03013 Nucleocytoplasmic transport
109889366
03015 mRNA surveillance pathway
109889366
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109889366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109889366
03041 Spliceosome [BR:
oki03041
]
109889366
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109889366
TREX complex
109889366
Spliceosome [BR:
oki03041
]
Complex C
Other components
EJC/TREX
109889366
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109889366
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_10
Motif
Other DBs
NCBI-GeneID:
109889366
NCBI-ProteinID:
XP_020336350
Ensembl:
ENSOKIG00005002575
LinkDB
All DBs
Position
LG1:65329968..65333334
Genome browser
AA seq
272 aa
AA seq
DB search
MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSSGRGGSGGRPGGAASGGRTGGSGPMRS
RQNFSGDRSDSRPTPYSRPRELPDKWQHDMFEGGFGSNAGGGGGAGGGGVETGGKLLVSN
LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPLD
GRAMSIQHVTSQIRDDNQRRPSQSSNGGSGGFNRDRIGRPNFSDRRGGGDRRAGRGSRGR
GRGGRGGGKPQQLSAEELDAQLDAYNAKMETS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatggatatgtctttggatgacattattcaacaaagtaagaaaggcgga
ggtggccgcggaaatcgaggaggccgcagccgcggatcatcgggtcgaggtgggagtgga
ggccgacccggtggagctgcctctggaggccggaccggcggatccgggcccatgaggagt
cgacagaacttcagtggagacagaagcgacagcaggcccacgccatacagcaggcccaga
gagctgccggacaaatggcaacacgacatgttcgaaggtggcttcggcagtaatgctggc
ggtggtgggggagcaggaggtggcggtgtggagactggtggcaagctccttgtctcaaac
cttgacttcggtgtctctgacgctgatatccaggagttgtttgcggaattcggtacgttg
aagaaagcggctgtgcactatgaccggtctggccgcagccagggaaccgctgacgtccac
tttgagaggagggctgatgcactcaaagccatgaaacagtacaacaatgtaccactcgat
ggccgcgccatgagcattcagcacgtcacgtcacaaattcgagacgataaccagagacga
ccatcacagagttcaaacggaggcagtggtggattcaacagagacagaattggacgcccc
aatttctcagacagacggggaggtggagacaggcgggccggcagaggctccagggggagg
ggtagaggtggacgtggtggaggcaaaccgcagcagttgtctgctgaagagctggatgcc
cagttggatgcgtacaatgctaagatggagaccagttag
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integrated database retrieval system