Oncorhynchus kisutch (coho salmon): 109889374
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Entry
109889374 CDS
T09179
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1-like
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109889374
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109889374
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
PH_11
PIN_12
IQ
MYO6_lever
Endonuc-EcoRV
DUF641
Hydro_N_hd
Motif
Other DBs
NCBI-GeneID:
109889374
NCBI-ProteinID:
XP_031678651
Ensembl:
ENSOKIG00005018708
LinkDB
All DBs
Position
LG4:complement(31125889..31159512)
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AA seq
1260 aa
AA seq
DB search
MQKGIRFNDGHVTYLGLLAKKDGTRRGCLSKKSSDNTKWHTKWFALLQNMLFYFESESSS
RPAGLYLLEGCVCDRAPSPKPSQSSKECLEKQYYFTVNFTHENQKALELRTEDVKDCDEW
VAAITHASYRNLATEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSELSG
LHKDNGKIQSSPTAEPSEDDDSELKKIKKVQSFLRGWMCRRKWKTIIQDYIRSPHAESMR
KRNQVVFSMLDSEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFL
HQIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKL
LKQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERTSLDYAKSKLEEL
SRIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGRL
GSLSLKKEGERQCFLFSKHVIICTRGSGGKLHLTKNGVVSLIDCTLLEDPEGTDDESKPD
KGVQDMEHLDFKIVVEPKEGQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFE
ENSKVTVPQMIKSDASLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDF
LNTFLHSYRVFTSANVVLDKLITIYKKPISAIPARSLELFFASSQNNKLLYGEPPKSPRA
SRKFSSPPPLAITKTSSPNRRRKLSLNIPIITGGKALDLAALSCSSNGYASMYSSMSPFS
KTTLDINKLYVTSPSTSKIPAEGEGKTDKAEETTVSKQDISVPEESDIDQSQSDDADPET
SPIKSPTTPQKNVKCKNSSEFSLFSYNNGTVMSSCRPEMDNNNRSALSAASAFAIATAGA
NEGTPTKEKYRRMSLASTGFQTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFESNT
ELKLKVIAFLEEVMHDPELLTQERKAAANIIRTLTQEDPGDNQISLEEVKQLASVGRAEA
FESHSALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKTERTPYIMKTTKHFNDISNLI
ATEILRCDDVTTRVAVMEKWVAVADICRCLHNYNAVLEITSSLNRSSVFRLKKTWLKVSK
QTKTVIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDKLV
NFSKMRMISHIIREIRQFQQTAYKIDHQPKAAQYLLDNSSVLDEESLYEASLRIEPKVNN
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggaatacgatttaatgatgggcatgtcacctacctgggtcttttggcaaag
aaggatggtacgaggcgaggttgcttgagcaaaaagagctcagacaacactaaatggcac
acaaagtggttcgctttattacaaaatatgctgttttattttgagagcgagtccagctct
cgacccgcgggattatacctgttggagggatgtgtgtgtgacagagcgccgtcaccgaaa
ccctcacaatcatccaaggagtgtttagaaaagcagtactacttcaccgtaaatttcacc
cacgaaaaccagaaagccctggagttgcgtacagaggatgtaaaggactgcgatgaatgg
gtggctgcaataacacatgccagttacaggaacctggccacggagcacgagacgctcatg
cagaagtatctccatctactccagatcgtggagacagagaaaacggttgctaagcaactt
cgacaacagatagaggacggggaaatagagattgaacggctaaaatcagagctttccggg
ctgcacaaagacaacgggaagatccagtcaagtccaacagccgaacccagcgaagatgat
gactctgaactcaagaaaatcaaaaaagtgcagagtttcctgcgaggctggatgtgcagg
aggaagtggaaaaccatcatccaggactacatccggtcaccccatgcagagagcatgagg
aagaggaaccaggtggtgttcagcatgctggactctgaggctgagtatgtccagcagctc
cacatcctggtcaacaatttcctccgacccctccgtatggccgccagctccaagaaacca
cccatcacccacgacgacgtcagcagcatcttcctcaacagtgagaccatcatgtttctg
catcaaatattctaccaagggttgaaagcaagaatagcaagctggccaacattagttttg
gcggacctgtttgatattctactgcccatgctaaacatctaccaggagtttgtgaggaac
caccagtacagtctgcagattctggcccactgtaaacagaaccgagactttgacaagctg
ctaaagcagtatgaggccaagcccgactgtgaggagaggactctggagaccttcctcacc
taccccatgttccagattccccgctacattcttacactccatgagctcctggcccacaca
ccacatgagcatgtggagaggacgagtctggactatgccaagtcaaagctggaggagctg
tccagaatcatgcatgatgaggtgagcgagacagagaacatcaggaagaacctggccatt
gagcgcatgatcgtagaaggctgcgagatcctccttgacaccagccagacattcgtcaga
caaggctctctcatccaggtgccaatgagtgagaagggcaagatcacccgtgggcgactg
ggctctctgtctctgaagaaggagggggagaggcagtgcttcctcttctctaagcatgtc
attatctgcaccaggggctctggaggaaaactgcacctcaccaagaatggcgtggtctct
cttattgactgcactcttctggaagaccccgaggggacagatgatgagtccaaaccagac
aagggtgtacaggacatggagcatctggactttaagatcgtggtggagcctaaagaaggc
cagtcgtttacagtgatcctggtggcctcctcgcggcaggagaaatctgcatggaccagt
gacatcagccagtgcatagacaacatccgctgcaatgggcttatgatgaacgcatttgag
gagaactctaaagtcaccgtgccacagatgatcaagtccgatgccagcctgtactgtgac
gacgtggacatccgtttcagtaagatgatgaactcgtgtaaggtgttgcagatccgctat
gccagcgtggagagactcctggagaggctgacagacctgcgcttcctctccattgacttt
ctcaacaccttcctgcactcctaccgcgtgttcaccagtgccaacgtggtgctggacaaa
ctcatcaccatctacaagaaacccatcagtgccatcccagcccgatccctggagttgttc
ttcgccagcagtcagaataataaactcctatatggggagccacccaaatcccccagggcc
agccgtaagttctcttccccccctcctctggccatcaccaagacatcgtcccccaaccgc
cggcgtaaactctcactcaacatccccatcatcactgggggaaaggctctggacctggcc
gccctcagctgctcctccaatggctatgcaagcatgtactcctccatgtcccccttcagc
aagaccaccctggacatcaacaagttatatgtcaccagtcccagcaccagcaagatccct
gctgagggagagggcaagacggacaaggcagaggagaccactgtgtctaaacaagatatt
tctgttccggaggaaagtgacattgaccaaagccagagcgatgatgcagacccagaaacg
tctcctatcaagtcgccaaccactcctcaaaaaaacgtgaagtgcaaaaactcctcagaa
ttctccctgttctcatacaacaatggcacagtgatgtcttcgtgtcgccctgagatggac
aacaacaaccgcagtgccctctctgcagcctccgccttcgccatcgccacggcaggagcc
aatgagggcacgcccaccaaggagaagtatcgccgcatgtccctggccagcacagggttc
caaacagaccagaggaatggggacaaagagtttgtcatccgaagggctgcaaccaacaga
gtcctaaatgttctgaggcactgggtgtcaaaacactctcaggactttgagagtaacact
gagctgaagctgaaggtcatagccttcctggaggaggtgatgcatgacccagagctgctg
acccaagagaggaaagcagccgccaacatcatcaggaccctgacacaggaggaccctggt
gacaatcagatcagcctggaggaggttaaacagctggcgtcagtagggagggcagaggcg
tttgagagccattctgccctggagatagcagagcagctcaccctactagaccacctggtg
tttaaggtcatcccatatgaagagttctttggtcaaggctggatgaagaatgacaagact
gaaaggacaccatatatcatgaaaacaacaaagcacttcaatgatatcagtaacctgatt
gccacggagatcctgcgttgtgatgacgtgaccacgcgggtggcggtgatggagaagtgg
gtggcggtggcggacatctgccgctgtctccataactacaacgctgtgctggagatcacc
tcctccctcaaccgcagctctgtgttccgcctcaagaagacctggctcaaagtgtccaag
cagactaaaaccgtcattgacaagctgcagaagttggtttcgtcagaggggaggttcaaa
aacctgagggaggctttaaagaactgtgaccctccctgtgtaccatacctggggatgtac
ctcactgatctggctttcattgaggaggggacgcccaactacactgaggacaaattagtc
aacttctcaaagatgaggatgatttcacatatcatcagagaaattagacaattccagcaa
acagcatacaagattgatcatcagccaaaggcagcacagtatttgctggacaacagctct
gttctggatgaagaaagcctgtatgaagcctctctcagaattgagcctaaagtcaacaac
tga
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