KEGG   Oncorhynchus kisutch (coho salmon): 109889382
Entry
109889382         CDS       T09179                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109889382
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oki01009]
    109889382
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109889382
Protein phosphatases and associated proteins [BR:oki01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109889382
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     109889382
    Little elongation complex (LEC)
     109889382
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 109889382
NCBI-ProteinID: XP_020336372
Ensembl: ENSOKIG00005020971
UniProt: A0A8C7MFE5
LinkDB
Position
LG4:31563369..31614120
AA seq 603 aa
MAALRQEHRYGLSCAKINKKAQNKTLFHVKLTDTAIRTLEAYQNLKGSLPNQPAVCFKGS
QGYIKIPAPSPEAPDALRVFSFYLSSDSKDKPQASVDCIHQHVSGEGREHLEGQGSIQDK
ITVCATDDSYQMTRERMSQVEKDIMSRSAIEIKPGSTHGKCVKIQRKQGLSSGMDSSSNK
HSPNNKKSGAPNPVALRPLRDRIIHVLALKPYRKPELLLWLERERATPKDKTDLGAVLDE
VAKLNHKDHSFTLKDEFYRHVQKDWPGYLEEEKPLIHRLLARKLQPLSSSSQLKSFQSNH
SFHKTPADSPSQLSPVKTPSVKRPVPSDLSDYQTPKKQRLLDHSLSLQSPSNGQLGTFGA
RSSSGPGNTSVQTKTEFERTNNHIQGSPNGLYTRQKLGCSSSIPKLERTEPGLAVPSPKA
PQTEPSICTDQQLANGQHKKKKSKKHKDKDRERLKQDWIENSPDLKQNQENITDNEGAKT
PVTRTSPEELPDFLIKYNTITASEQRQQYKQDFCAEYDEYRALHDQIGTITEMFVQLGSK
INTLSPGTQEYKLMEEQILQKYRKYKKKFPGYREEKKRCEYLHQKLSHIKGLILDYDRTQ
APS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcagcgctgagacaggagcatcggtatgggctctcctgtgcaaaaatcaacaagaaa
gctcaaaataaaactctatttcacgtcaagctaaccgataccgccattcgaacgcttgaa
gcctatcagaatctgaagggatccttaccaaatcagccagcagtttgcttcaaggggagc
caggggtatatcaagatccctgccccatccccagaggccccagatgcactccgggtcttc
tccttctacctgtccagtgatagcaaagacaaacctcaggccagcgttgactgcatccac
cagcatgtctcaggggagggcagggagcacctggagggccagggcagtattcaggacaag
atcactgtgtgtgccactgatgactcataccagatgacccgagagcgcatgtctcaggtt
gagaaggacatcatgagcaggtcggccatcgagatcaaaccaggctctacacatggtaaa
tgtgtgaagatccagaggaagcagggcctgtcgtcaggcatggacagcagcagcaacaag
cactcccctaacaacaagaagagcggggcccccaacccagtagccctcaggcccctgaga
gaccgcatcatccacgtcctggccttaaagccctacaggaagcctgagctgctgttgtgg
ctggagagggagagggccactcccaaggacaagactgacctgggagcagtactggatgag
gttgctaaactgaaccacaaagaccacagctttactctaaaggatgagttctacaggcac
gtccaaaaggattggcccggttacctggaggaagagaagccgctcatccataggctcctg
gccaggaaactgcagccactgagcagcagtagccagttgaagagtttccagtcaaaccat
tcattccacaaaacccctgcggattctccgtcacaactcagcccggtcaagactccctct
gtgaaacgccccgtgccctccgacctatctgattatcagacccccaagaagcaaagacta
ttagaccacagtttatctctgcagtctccttccaatggacagcttggtacctttggagcc
cgtagctcatctggtccaggcaacaccagtgtacagaccaaaacagagtttgagagaacc
aacaatcacatccagggaagccctaatggtctctacacaaggcaaaaattgggttgctcc
tccagtattcccaagctggagaggacagagccaggcctagcagtaccaagccccaaggct
ccacagactgagccctccatctgcactgaccagcagctagccaacggccagcacaaaaag
aagaagtccaagaagcacaaagacaaggatagggagcgcttaaaacaggactggatagag
aacagtcccgacctgaaacagaaccaggaaaacatcactgacaatgagggggctaaaaca
cctgtcactcgtacatcaccggaggagctgcccgactttttaataaagtacaacaccatc
acagcctcagaacagcgacaacagtacaagcaggatttctgtgcagagtacgatgagtat
agggccctgcacgaccagatcggtaccatcactgagatgtttgttcagctgggttccaag
ataaacactctgtcccccggtacacaggaatacaagctcatggaggagcaaatactgcag
aaatacagaaagtataagaaaaagttccctggttaccgggaagagaagaagcgatgcgag
tacctgcatcagaaactttctcacatcaaaggtctgatcctggactatgaccgtacccag
gccccttcatag

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