Oncorhynchus kisutch (coho salmon): 109889447
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Entry
109889447 CDS
T09179
Name
(RefSeq) vacuolar protein sorting-associated protein 26A isoform X1
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04142
Lysosome biogenesis
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109889447
04142 Lysosome biogenesis
109889447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109889447
Membrane trafficking [BR:
oki04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Retromer subcomplex
109889447
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps26
DDE_3
Motif
Other DBs
NCBI-GeneID:
109889447
NCBI-ProteinID:
XP_031660818
Ensembl:
ENSOKIG00005050865
LinkDB
All DBs
Position
LG25:34409968..34421580
Genome browser
AA seq
355 aa
AA seq
DB search
MMSLRPCVFIVWIVKWKRTLAGNCRIYFFYANFLNVDKLMETYLLCPMPIPHNLFVFSCK
VNLNVRQTGKRLEHQGIRIEFVGQIELFSDKSNTHEFVNLVKELALPGELTQNRSYDFEF
TQVEKPYESYVGTNVRLRYFLKVTVMRRLSDLVKEYELIVHQLATYPDVNNSIKMEVGIE
DCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEMTGIGPSTTTETDTVA
KYDIMDGAPVKGESIPIRLFLAGYDLTATMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQF
GEGPFLFQHDNAPVHLARSIQKWVVEIGVEDLYWPARSPDLNPIKHLWDELERGL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcattacgtccatgtgtttttatcgtctggatagttaaatggaaacgcacctta
gcaggcaattgtcgcatctattttttttatgcaaactttctgaatgttgacaagctaatg
gaaacatacctactgtgtcctatgccaataccccataacttgtttgtgttttcttgtaag
gtgaatctcaatgtgaggcagacgggcaagagactagaacaccaggggattcgaattgag
tttgttgggcagattgagctcttcagtgataaaagcaacacacatgagtttgttaacctg
gtgaaggagcttgccctgccaggggagttgacccagaaccgaagctacgactttgagttc
acgcaggtggagaagccctatgaatcttacgttggaaccaatgtccgactgagatatttc
ctcaaagtgacagtaatgaggagactgtctgatctggtgaaagagtatgagctcattgtc
catcagctggctacttaccctgatgtgaataattccattaaaatggaagttggcattgaa
gactgtctacacatagagtttgaatacaacaagtccaaataccacttgaaagatgtcatt
gtgggtaaaatctatttccttctggtgagaatcaaaatccaacacatggaacttcaattg
ataaagaaggagatgactggaatagggcctagcacaactacagagacggacactgttgcc
aagtatgacataatggatggcgcccctgtgaaaggagagtccattcccatccgtctgttt
ttggctggctacgacctgacagccaccatgagggatgtcaacaagaagttctctgtgcgg
tacttcctcaacctggtgctggtggatgaggaggacaggagatacttcaaacagcagttt
ggggaaggacctttcctgtttcagcatgacaatgcccccgtgcacctagcgaggtccata
cagaaatgggttgtcgagatcggcgtggaagacctttactggcctgcacggagccctgac
ctcaaccccatcaaacacctttgggatgaattggaacgcggactgtga
DBGET
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