Oncorhynchus kisutch (coho salmon): 109889462
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Entry
109889462 CDS
T09179
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109889462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109889462
Membrane trafficking [BR:
oki04131
]
Exocytosis
Others
Others
109889462
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109889462
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
RBD-FIP
Rod_CreS
CCDC192
DUF5798
AAA_13
GAS
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
109889462
NCBI-ProteinID:
XP_020336492
Ensembl:
ENSOKIG00005000963
LinkDB
All DBs
Position
LG4:35507106..35538004
Genome browser
AA seq
1118 aa
AA seq
DB search
MYGSARSVGRADANHSGGGRDAGRDGGSSQGSGRSPRLPRSPRMGHRRTNSTGGSGGCPG
GAGGKTLSMENIQSLNAAYATSGPMYLSDNEVAMSDRVNKSGREMTTMGRQRVTYGSRAS
AGGGGGVAASTPNIATSAPANAVLPGGMMAGDSLAFGDHHMASTVPHSLRQARDNTILDL
QAQLKEVLRENELLCREVEVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKITVWKEQ
YRVVQDETQHLHMTVQALQDELRIQRDLNQLLQQDPASQGRELALNSEPTEENYRRLHGD
HERQAKELFLLRKTLEEMELRIDTQKQTLGARDESIKKLLEMLQSKGPSAKASEEDQERT
RRLADAEMHRHHLESLLDQRDRETTALREELHRRYEGTPESTKTKALQTVIDMKDAKINS
LERGLRDMEEEVMMLKSNGLLSCEERQEDMKQMEVYRSHTKFMKNKMDQVKQDMSRKDTE
LLGLQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETTLNKK
SKQIQEMSEEKGTLNGEIHDLKDMLEVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERV
KSLQTDTSNTDTALNTLEESLAEKERIIERLKEQRDRDDREKTEEIDSNKKELKDLKEKV
SLLQGDLSDRETNLLDLKEHASSLASSGLKKDSKLKSMEISLDHKKEECLKLENHLKRAQ
NATLEAKANTELSERITSLEQEVTRHREDSGKAQAEVDRLLEILREMENEKNDKDRKINE
LENQSSRQTKDQSKKVASLKHKEQVEKSRNARLVDEAKKREDNISESSQQVKDSLRLKTE
RIEELEEALRESVQITAEREMVLAQEEAARNHQEKQIEELLGAMEKVKQELESMRAKLSS
TQQSLCEKETHLTTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKKTQD
EVALLKREKDRLVQQLKQQTQNRMKLMADNYEDDHLKTAPDQTNHKPSPDQMIPPLLSLS
ENRNKLKLYIAHLTDLCHDRDPSILSVLTPPPHYHHANPPAWEEELHKMTLEQLELELEL
CEKESGELQEYANSVLQQIADYCPDILEQVVNALEESC
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagcgcccgttccgttggccgagcggatgccaaccacagcggaggagggaga
gacgctgggagggatggggggagcagccagggttctgggcgctcccctcgtctcccccgc
tcaccacggatgggtcaccgtcgcacaaacagcacggggggcagcggaggatgtccaggc
ggagcggggggtaagaccctctccatggagaacatccagtccctcaatgcagcctatgcc
acctcaggacccatgtacctgagcgacaacgaggtcgccatgtccgaccgcgttaacaag
agcggtcgggagatgaccacaatggggcgacagagggtgacatacgggtcaagggcgagc
gcaggtgggggtggaggcgtggcagccagcacaccaaacatcgccacatcggccccagcc
aacgctgtgctccctgggggaatgatggcaggtgactccctggcttttggggatcaccac
atggcctctacggtgccccactccctgagacaagcccgggataacaccatactggacctg
caggcccagctcaaagaggttctgcgtgagaatgagttgctgtgtcgtgaggtggaggtg
aaggagagcaagctgagttcctccatgaactccataaagaccttctggagccctgagctg
aagaaggagagagccctaaggaaggacgaggtgtccaagatcactgtctggaaggaacaa
taccgcgtggtgcaagacgagacacagcacctccacatgacggtccaggccttgcaggat
gaattgaggatccagagagacctgaaccagcttctccagcaggaccctgccagccagggt
cgcgaactggccctgaactctgaacccacggaggagaactaccggcggcttcatggggac
cacgagcgtcaggccaaggagctgttcctgctcagaaagaccctggaggagatggagctg
agaatagacacccagaaacagaccctgggtgccagggacgagtccatcaagaaactgctg
gagatgctgcagagcaaagggccgtcggctaaggcctcagaggaagaccaggagagaacc
aggagactggctgatgctgagatgcacagacaccatctagagtccctactggaccagaga
gacagggagacgactgctctacgagaggagctgcatcgtcgatacgagggaaccccagag
tccaccaaaaccaaggctctacagacagtcatcgacatgaaggatgctaagatcaactct
ctggagcgaggtctgagggacatggaggaggaggtgatgatgctcaagtccaacggcctg
ctgagctgtgaggagagacaggaggatatgaaacagatggaggtctaccgcagccacacc
aagttcatgaagaacaagatggaccaagtaaagcaggacatgtccaggaaggacacagag
ctgctaggtttacagaccaagctggagactctgaccaaccagttctctgatagcaaacag
cacatcgaggtcctcaaggagtcgctgaccgctaaagaacaacgagctgccatcctacag
acagaggtggatgcgttgcgtctgcgtctggaggagaaggagaccacgctgaacaagaag
agtaaacagatccaggagatgtctgaggagaagggcacgctcaacggagagatccacgac
ctcaaggacatgctggaggtcaaggagcgcaaggtcaacgtcctgcagaagaagattgag
aacctgcaggaacagctgagagacaaggagaagcagatgagcagcctgaaggagagagtc
aagtctctacagacagacacctctaacacagacacagctcttaacacactggaggagtcc
ctcgctgagaaggagcgtatcatcgagcgtctgaaggagcagagagacagagacgacagg
gagaagactgaggagatcgacagcaacaagaaagaactgaaggatctgaaggagaaagtc
agtctgctgcagggagatctgtctgacagagagaccaatctgttggacctaaaggagcat
gcatcatccctggcctcctcggggctgaagaaggactccaagctgaagagtatggagatt
tctctggaccataagaaggaggagtgtctcaaactggagaaccatcttaagagggcccag
aatgcgactttggaggccaaggcgaacacagagctgtcggaacgcatcacctccctggag
caggaagtgacccgacacagagaggattctggcaaggctcaggcggaggtggaccggctg
ctggagatcctgagagagatggagaatgagaagaacgacaaggaccgcaagatcaacgag
ctggagaatcagtcctccaggcagaccaaggaccagagtaagaaggtagcgtccctgaaa
cacaaggagcaggtggagaagagtaggaacgcccgactggtggacgaagctaaaaagaga
gaggacaacatctcagagagctctcaacaggtcaaggactctctgcggttgaagactgag
cgtatcgaggagttagaggaggctctgagggagagtgttcagattacagcagagagagag
atggtgctggcacaggaggaagctgccaggaaccaccaggagaaacagattgaggagctc
ctgggggccatggagaaggtaaaacaggagctggagtctatgagggccaagctatcatct
acccaacagtccctgtgtgagaaggagactcacctgaccactttgagggccgaacgcagg
aaacacctggaggaggtgctggaaatgaaacaggaggcgctgctggcagccatcagtgag
aaggacgccaacattgccctgctggagctgtcctcgtccaagaagaagaagacgcaggac
gaggtggctctgctaaagagagagaaggaccgtctggtacaacagctcaaacagcagact
cagaaccgtatgaagctaatggcagacaactatgaggatgaccacttgaagaccgctccc
gaccagaccaatcacaaaccttctccagatcagatgatcccccctctcctgtccctgagt
gagaatcgcaataagcttaagctctacattgcccacctgactgacctctgccacgaccga
gaccccagcatcctcagtgtcctgaccccacccccccactatcaccacgccaacccacca
gcctgggaggaggagctacacaagatgactttggagcagttggaactggagttggagttg
tgtgagaaggagagcggggagctgcaggagtatgccaactcagtgctgcagcagatcgct
gactactgccctgacatcctggagcaggtggtcaacgcgctggaggagtcctgctga
DBGET
integrated database retrieval system
