KEGG   Oncorhynchus kisutch (coho salmon): 109889483
Entry
109889483         CDS       T09179                                 
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04620  Toll-like receptor signaling pathway
oki04621  NOD-like receptor signaling pathway
oki04622  RIG-I-like receptor signaling pathway
oki04623  Cytosolic DNA-sensing pathway
oki05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oki00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    109889483
   04621 NOD-like receptor signaling pathway
    109889483
   04622 RIG-I-like receptor signaling pathway
    109889483
   04623 Cytosolic DNA-sensing pathway
    109889483
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109889483
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oki03000]
    109889483
Transcription factors [BR:oki03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    109889483
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 109889483
NCBI-ProteinID: XP_020336522
Ensembl: ENSOKIG00005002345
UniProt: A0A8C7CIT4
LinkDB
Position
LG4:complement(35836776..35847412)
AA seq 416 aa
MQSCKPQFADWLIEQVRTGQYTGLFFIDNNKFRVPWKHNSRKDCSEDDRKIFRAWAVVSG
KINEHPTDNAKWKTNFRSALNSLCRRFKMVEDHSKDSNDPHKVYLVINEYNYESPHIEEI
TLENYGLDCALIPTENTPPGMEHDILNFSNLTLNPLDLNQHTENSIPVHTHHPVPPVLVQ
QPYYQENPDALLNLPAAHSSLWGLEITISYRGSEMRKTQVSGPRVQLHYQCNALEPNTQP
LCFPSTDGLPDHKQIEYTNCILGSVQRGLLLEVQNTGIYGYRQDKCHVFSSTSDPREAHP
EPRKMPQNEMVQLLSFQQYENELIAFKENRRGSPDYTIHMCFGEKFPDGKPLEKKLIVVK
VVPLICRYFHEVAQEEGASSLQNDNISLQISHHNSLMELINATWPDGPQHAMGQYF
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgcaaagctgcaaacctcagttcgctgactggctgatagaacaggtgcggaccgggcaa
tacactggtttgttctttattgacaacaataaattcagagtcccgtggaaacacaattct
aggaaggattgctccgaggacgaccgtaaaatattcagggcatgggcagtggtcagtggg
aaaatcaatgagcatcccactgacaatgcaaagtggaagaccaacttccgctctgcactg
aacagcctgtgcaggcgtttcaagatggtggaagaccactccaaggactcaaacgacccc
cataaagtctacctggtcatcaatgagtataactatgagagcccgcacatagaagaaatc
actctggagaactatggccttgactgtgctctcatccctacagaaaacacacccccaggc
atggagcatgatatactgaactttagcaacctaaccttgaaccccctagacctgaaccaa
cacacagagaattctataccggtacacacacaccacccagtgccaccagtcctagtacag
cagccatactaccaagaaaatccggatgccctgctcaacctgcctgccgcccactcatcc
ctctggggtttggagatcaccatctcctatagggggagcgagatgcgaaagacccaggtg
tcaggccccagggttcagctccactaccagtgtaatgctctcgagcccaacacccagccc
ctctgcttccccagcactgacggtttgccagaccacaaacagattgaatacaccaactgc
atcctaggaagcgtccaaaggggtcttctcctcgaggtacaaaacactggtatctatggt
taccggcaggacaagtgccacgtgttctccagtactagtgaccccagagaggcacaccct
gaacccaggaagatgcctcaaaatgaaatggtacaactgttgagcttccagcagtacgaa
aatgagctgatagcatttaaggagaacaggcgaggctctcctgactataccatccacatg
tgctttggtgagaagttccctgatggaaaacccctggagaagaaactcatcgttgtcaag
gtggttcccctgatctgtcgttacttccacgaggtggcccaggaggagggggcatcgtcc
ctccagaatgacaacatcagcctgcagatctcccaccacaacagcctgatggagctcatc
aatgccacctggcccgacggcccacagcacgccatggggcagtacttctag

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