Oncorhynchus kisutch (coho salmon): 109889483
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Entry
109889483 CDS
T09179
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04620
Toll-like receptor signaling pathway
oki04621
NOD-like receptor signaling pathway
oki04622
RIG-I-like receptor signaling pathway
oki04623
Cytosolic DNA-sensing pathway
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109889483
04621 NOD-like receptor signaling pathway
109889483
04622 RIG-I-like receptor signaling pathway
109889483
04623 Cytosolic DNA-sensing pathway
109889483
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109889483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109889483
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109889483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
109889483
NCBI-ProteinID:
XP_020336522
Ensembl:
ENSOKIG00005002345
UniProt:
A0A8C7CIT4
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All DBs
Position
LG4:complement(35836776..35847412)
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AA seq
416 aa
AA seq
DB search
MQSCKPQFADWLIEQVRTGQYTGLFFIDNNKFRVPWKHNSRKDCSEDDRKIFRAWAVVSG
KINEHPTDNAKWKTNFRSALNSLCRRFKMVEDHSKDSNDPHKVYLVINEYNYESPHIEEI
TLENYGLDCALIPTENTPPGMEHDILNFSNLTLNPLDLNQHTENSIPVHTHHPVPPVLVQ
QPYYQENPDALLNLPAAHSSLWGLEITISYRGSEMRKTQVSGPRVQLHYQCNALEPNTQP
LCFPSTDGLPDHKQIEYTNCILGSVQRGLLLEVQNTGIYGYRQDKCHVFSSTSDPREAHP
EPRKMPQNEMVQLLSFQQYENELIAFKENRRGSPDYTIHMCFGEKFPDGKPLEKKLIVVK
VVPLICRYFHEVAQEEGASSLQNDNISLQISHHNSLMELINATWPDGPQHAMGQYF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctgcaaacctcagttcgctgactggctgatagaacaggtgcggaccgggcaa
tacactggtttgttctttattgacaacaataaattcagagtcccgtggaaacacaattct
aggaaggattgctccgaggacgaccgtaaaatattcagggcatgggcagtggtcagtggg
aaaatcaatgagcatcccactgacaatgcaaagtggaagaccaacttccgctctgcactg
aacagcctgtgcaggcgtttcaagatggtggaagaccactccaaggactcaaacgacccc
cataaagtctacctggtcatcaatgagtataactatgagagcccgcacatagaagaaatc
actctggagaactatggccttgactgtgctctcatccctacagaaaacacacccccaggc
atggagcatgatatactgaactttagcaacctaaccttgaaccccctagacctgaaccaa
cacacagagaattctataccggtacacacacaccacccagtgccaccagtcctagtacag
cagccatactaccaagaaaatccggatgccctgctcaacctgcctgccgcccactcatcc
ctctggggtttggagatcaccatctcctatagggggagcgagatgcgaaagacccaggtg
tcaggccccagggttcagctccactaccagtgtaatgctctcgagcccaacacccagccc
ctctgcttccccagcactgacggtttgccagaccacaaacagattgaatacaccaactgc
atcctaggaagcgtccaaaggggtcttctcctcgaggtacaaaacactggtatctatggt
taccggcaggacaagtgccacgtgttctccagtactagtgaccccagagaggcacaccct
gaacccaggaagatgcctcaaaatgaaatggtacaactgttgagcttccagcagtacgaa
aatgagctgatagcatttaaggagaacaggcgaggctctcctgactataccatccacatg
tgctttggtgagaagttccctgatggaaaacccctggagaagaaactcatcgttgtcaag
gtggttcccctgatctgtcgttacttccacgaggtggcccaggaggagggggcatcgtcc
ctccagaatgacaacatcagcctgcagatctcccaccacaacagcctgatggagctcatc
aatgccacctggcccgacggcccacagcacgccatggggcagtacttctag
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