Oncorhynchus kisutch (coho salmon): 109889515
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Entry
109889515 CDS
T09179
Name
(RefSeq) class E basic helix-loop-helix protein 41-like
KO
K03730
class B basic helix-loop-helix protein 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109889515
Transcription factors [BR:
oki03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
109889515
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
DCX2_DCDC1
Utp13
Oscp1
Motif
Other DBs
NCBI-GeneID:
109889515
NCBI-ProteinID:
XP_020336575
Ensembl:
ENSOKIG00005005813
UniProt:
A0A8C7DE12
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All DBs
Position
LG4:complement(39994245..39998324)
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AA seq
430 aa
AA seq
DB search
MDERIPRLQDRQFTDHEHFLGLEYSSLYMCKSKRGLKREDGKDAYKLPHRLIEKKRRDRI
NECIGQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLNALTAVTEQQHQKIIALQNGDRSM
KTSVHADLDAFHSGFQACAKEVLQYLNKFENWNTREQRCAQLINHLHKVSAQFQPSAPLL
HSQQPAGDVLERDGQKAEIQAGHDRVSVIQRSHGELNENDTDTDSGYGGEAEKTDGNKGC
DRSKAVKIKQEFGDERAAKKTKMNWAGNGTTGADTTTRPDLAFMNSLMGITGVGQQTPFC
MPFYFINPSAAATYMPLFDKSSLEKFVYPAAAAAALSAPFPWLYPGLNSQASATAAAAAG
AFSGMSTEKSSGFGSNSKHSLSDDSDMSNVEPGSPEEREDNPENDVDYDDDDDDDDDDDD
DGIRERLPRQ
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagaataccgcgtctgcaagacagacaatttactgatcatgaacatttttta
gggttggaatactcctcactctacatgtgtaaatcgaaaagaggactgaagcgcgaagat
ggcaaggacgcgtacaagttaccacaccgattgatagagaagaagaggagagacagaatc
aatgaatgtatcggacagctgaaggatttgttacccgaacatctcaaattgacgacgctc
gggcatttggagaaagcggttgttctcgagttaactttgaagcatttaaacgctttgact
gcagtcactgagcagcaacaccagaagattattgctttgcagaatggggatcgatcgatg
aagacgtccgttcacgctgatttggatgcgttccactccgggttccaagcatgtgccaaa
gaggtcctgcagtacctcaacaagttcgagaactggaatacgcgcgagcagcggtgcgcg
cagctcatcaaccacttgcacaaagtatctgcgcaatttcagcccagtgcgccactgctc
cattcccagcaacctgccggagacgtgctggagcgcgatggccagaaagctgaaatacaa
gccggacatgaccgcgtatcggtcatacagaggagccacggggagcttaacgagaatgac
acagacacagacagtggatacgggggtgaggcggaaaagaccgatgggaataaaggatgt
gaccgtagcaaagcagtgaagataaagcaggagttcggggatgaacgcgcagccaaaaaa
acgaagatgaactgggctggaaacggtacgacgggcgcagacacgaccaccagacctgat
ctggcctttatgaactctttgatgggaataactggcgtgggacagcagactccattttgc
atgcctttttacttcatcaatccctctgcagcagcgacctacatgccgctattcgacaaa
agtagcctagagaagtttgtgtaccctgctgcggcagcagcagctctctcagccccgttt
ccatggttataccccggccttaactcacaagcttcggcaactgcagcggctgccgcaggt
gctttctccggcatgtcgacagagaagagctctggattcggttccaactccaagcactct
ctctctgacgacagtgacatgtcaaacgtggagccgggctcacctgaggagagggaggac
aaccctgagaatgatgttgattatgatgatgatgatgatgatgatgatgatgatgatgat
gatggtattagggaacgactccccagacaatga
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