Oncorhynchus kisutch (coho salmon): 109889524
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Entry
109889524 CDS
T09179
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109889524
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109889524
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
LMBR1
DUF16
Phage_H_T_join_2
FlaF
Fez1
WHEP-TRS
Spc29
Motif
Other DBs
NCBI-GeneID:
109889524
NCBI-ProteinID:
XP_020336593
Ensembl:
ENSOKIG00005012163
UniProt:
A0A8C7FPF5
LinkDB
All DBs
Position
LG4:40452863..40523845
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AA seq
1005 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKSMDYSNSLFDCQSPTSPFLGSLRALHLLEDLRGVLE
LMDMEEREGLRCQIPDATADSLVDWLQQGHLMSNGHHISMGGDLYQERLSRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLEMCLDEHREKLNATEEMLQQELLCRTTLETQKLDLMAEVS
NLKLKLNSFEKDILHFDFRDSEDMGLEINELRYKVTEMESERLQYEKKLKSTKSLMAKLS
SLKIKVGQMQYEKQRNEHKLQALKEELVTLRRQLEGRDREVRRLHGETGFRTNTPGGMDC
GDRVSHPDETLKKRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELRQSLQRYKKVQDMV
MSVQEKKDKTKDGESDESNSDNFLSVMSTTTTPVALESERHALAGVEEVGVKSPDELETH
YGATEVPSATTRPTVQSACALSVPELNQAEPERSLRVPKSASQENLYVSNSEKITLVIDE
KPTENKAVEDIGKISERPPRSPSSSRPEDDSFGTKKARSSFGRGFFKIKGGKRTASTPNL
AETVREGGTDHLDLAGLPQRSAISDSTNTLTSVTSTTSPEGKKKSRGIKALFGKLRRSQS
TTFNLDDNLSEPVEFKRGGVRATAGPRLGWSRDLQQSPNTDLDTPFAHWSKEQVCDWLQE
QGLGLYLNMAHVWISSGQTLLQASQQDLERELGIKHSLHRKKLQLALQALGSEEDDNKGK
LDYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQV
LRLNNYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLM
VLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLVGSEAQGLKQDYLENPDYTLLTATA
KVKLRKMTFGSFGSLRKKRQDESEEYVCPMDVEMPKGRSFQKGYELYEDDMDRLEQMEDS
EGTVRQIGAFSEGIQNLTSMLKDDEFFKEISNSPNPSVTDDDSNV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagcagctttggagcagatggatgggataata
gcaggctccaagtccatggactactccaacagcctgtttgactgccagtcaccaacctct
cccttcttgggaagcctgcgggcactgcacctgctggaggacctccggggcgtgctggag
ctgatggacatggaggagagggagggccttcgctgccagatccctgatgccaccgcagac
agcctggtggactggctgcagcagggacacctgatgtccaatggccaccacatttccatg
ggtggtgacctctaccaggagagactgtctcgactggagggtgacaaggaatccctggtg
cttcaggtgagtgtgttgacagaccaggtggaggcgcagggggagaagataagggacttg
gaaatgtgtctggatgaacaccgggagaaactgaacgccactgaggagatgctacaacag
gagctcctgtgcagaacgactctagagactcagaaactggacctaatggctgaggtgtcc
aacttgaaactgaagctgaactcatttgagaaggacatactgcactttgacttcagggac
agtgaggacatgggtctggagattaatgagctgaggtacaaagtgactgagatggagagt
gaaagactacagtatgagaagaaactgaaatccactaagtcgctaatggccaagctttct
agcctgaaaatcaaagtgggccagatgcagtatgagaaacagaggaacgagcacaaactg
caggcactgaaggaggagctggtgacgctgaggaggcagctggagggaagggacagagag
gtgaggaggttacatggcgagactgggttcaggaccaacaccccgggtggcatggactgt
ggagacagagtctctcacccagatgaaactcttaaaaagaggctgaaagagaaacatgtg
gaagtgcagagaatgaaaaaagcggtggagtcactgatggcagctaatgaggagaaggat
cgtaagattgaggagctgaggcagtcgctgcagcgctacaagaaggtccaggacatggtg
atgtcagtgcaagagaagaaagacaaaaccaaagatggtgagagtgatgagagtaacagc
gacaacttcctctctgtgatgtcaacgacaaccaccccggttgccctggagtcggagagg
cacgcgctagctggagtcgaggaagtaggagtgaagagcccagacgagctggagacgcac
tatggagctactgaagtgccttcggcaacaacccgccctacagtccagtcagcctgcgct
ctgagcgtgccagagcttaaccaagctgaacctgagaggtccctgcgtgtcccaaagtca
gcgagtcaggaaaacttgtatgtcagcaacagtgaaaagattacattggtgattgacgaa
aagccaacagagaataaggctgtggaggacatcggtaagatcagcgagcgcccgcccagg
tctccctcttcatctcgcccagaggacgacagcttcggtaccaagaaggctcgctcctcc
tttggccgaggcttcttcaagatcaaggggggcaagaggacagccagcacccctaacctg
gctgagaccgtgcgagaggggggcactgaccatctggacctggccgggctaccccagagg
tcagccatcagtgacagcaccaacacactgaccagtgtgacctccactacctctcccgag
ggcaagaagaagtccaggggaatcaaggcactctttggaaagctgaggagaagtcagtcc
accacattcaacctggatgacaacctatcagagccggtcgagttcaagagaggcggagtc
cgggccacagcaggacccaggctgggatggtcccgggacctacagcaatcacccaacact
gacctggacaccccgtttgcccactggtccaaggagcaggtgtgtgactggctgcaggag
cagggactggggctctacctgaacatggcccacgtgtggatctcttctggacagactctg
ctgcaggcctcacagcaggatctagagagggagctgggcatcaaacactctctgcacagg
aagaagctccaactggccctgcaggctctgggctctgaggaggatgacaataagggcaaa
ctggactacaactgggtgaccagatggctggatgacattggcctgcctcagtataagact
cagttcgatgaagggagggtggacggccgcatgctgcactatatgacagtagatgacctg
ttgtctctgaaggtgggcagtgtgctccaccacctcagcatcaaaagagccatccaggtg
ctacgcctcaacaactacgagcccaactgcctgcgccgacggccctccgatgagaacaat
atcacaccagcagagatctcccagtggaccaatcacagagtaatggagtggctgagatca
gtagacctggcggagtacgcccccaacctgaggggcagcggcgtgcatgggggactcatg
gtgctggagcctcggttcaatgtggagaccatggccctgctgctgaacattccccccaac
aagaccctgctgcggaggcacctggccacccacttcaacctgctggtgggatctgaggcc
caggggctcaaacaggattatctagagaaccccgactacaccctgcttacagccaccgcc
aaggtcaagctgaggaagatgacatttgggagctttggcagcctgagaaagaagaggcag
gacgagagtgaggagtatgtctgccccatggacgtggagatgccaaagggacgtagcttc
caaaaaggctatgagctctacgaggacgatatggaccggctagaacagatggaggactcc
gagggaactgtgaggcagattggagccttctctgagggcatccaaaacttgacgagcatg
ctgaaagatgatgaattcttcaaagagatctccaactctcccaaccccagcgtaacagat
gacgattccaacgtttga
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