Oncorhynchus kisutch (coho salmon): 109889576
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Entry
109889576 CDS
T09179
Symbol
lrrc29
Name
(RefSeq) leucine-rich repeat-containing protein 29
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109889576 (lrrc29)
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109889576 (lrrc29)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
DUF7885
LRR_6
F-box-like
F-box
LRR_RPS2
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_Zer-1
F-box_5
Motif
Other DBs
NCBI-GeneID:
109889576
NCBI-ProteinID:
XP_020336704
Ensembl:
ENSOKIG00005044397
LinkDB
All DBs
Position
LG4:complement(44104057..44109667)
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AA seq
649 aa
AA seq
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MGEITMETPELPLEIVTYILSFLKASDRKEASLVCWSWYDASQDLQFQRNDTFKFPASIS
SLDLIRGLSRRSRCSLVISHLDGSSMSRAVLQEIGLHLGPRLESLALPGSSVTESSLLAL
LPHLTALRRLDLRGLDSLFMSGAFLSKEEHRQQVGVALAGLEELDLSDLRYLSDLTFNRL
TGCTLRLRRLSLAGCHIAFEFDPYRGCPVGPDSSALLSLRNLRRLLQEQASTVRGLDLSR
TSITPESLRSVAQVGGLSLEELRLRGCKELTDYSVEVLCKHQPGLRILDLSACTELTSRA
VLAVALSLKGLRFLSLSRDWRMTDKGLADLMMLPELRNLDLSECLHVSGAEIVKGLSALE
PRARLETLSFKSCTYIRDLAVFSLARLLGSSLRELDLTSCVYLTDLSVRAIATYLPGLVV
LRLGWCKEITDWGLLGMVELTKECEPSKEMEDKGPSFTRTFGNMGFFRPPSMPFQEKPRL
VTDEDLGVFKEQDGSSLLALRSLQELDLSACSKLTDSSITQVLRYPDLQRLSLSMLPEIS
DDSLASVAYHCRSLTSLALSHCPQISDQGIARAAPYLARLQHLYLSCCDAVTDRALSMLV
QHCKRLRTLDISMCKDISITTVDLLQSQLPFLENVHCRFVGGADLTLTL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaataaccatggaaacgcctgagttacctcttgagatcgtcacctacatccta
agtttcctcaaagcatcagacaggaaggaagcctctttggtgtgctggagctggtatgat
gcgagccaagacctccaatttcagaggaatgacaccttcaagttcccagcctctatctcc
tccctggatctgatccggggcctgagtaggcgttcccgctgcagcctggtcataagccat
ctggatgggtccagtatgtcccgggctgtgcttcaggagatagggctccatctaggccct
cggctggagagcctggccctgccaggaagcagcgtgaccgagtcttccctcctggccctg
ctgccccacctgaccgccctgcgcaggcttgacctccgtggcctggacagcctcttcatg
tctggagccttcctgtccaaagaagagcaccgccagcaggtgggggtagctttagcaggt
cttgaggagctggatctctctgacctgcgctatctatcagatctcaccttcaaccgactc
acaggctgcactctcagacttcgccgtctctccctggccggctgccacatcgcctttgag
tttgacccgtaccgtggctgccccgtggggcctgactcctctgccctgctctccctacgt
aacctccgcaggctgctgcaggagcaggcctccaccgtgcgggggctggacctgagcaga
actagcatcaccccagagtcgctgcgctccgtggcccaggtagggggcctgtctctagag
gagctgcgtctgcggggctgcaaggagctgacagactactccgtggaggtgctctgcaag
caccagcctggcctccggatcctggacctcagcgcctgtacagagctcaccagccgggct
gtactggctgtggccctgagccttaagggcctccggttcctctctctgtctcgggactgg
aggatgacggataaagggctggccgacctgatgatgctgccggagctgaggaacctggat
ctgtctgagtgcctgcatgtcagtggggctgagatagtgaaagggctctctgccctggag
cccagggcacggttggagacactcagcttcaagagctgcacctatatcagggatctggct
gtgttctctctggctcggctgctgggctccagtttgcgggagctggacctcacctcctgc
gtctacctcacagacctgagtgtgcgtgctatcgccacctacctgcccgggctggtggtg
ctgcgactgggctggtgcaaggagatcacagactgggggctgctgggcatggtggagctc
accaaggagtgtgagcccagcaaggaaatggaggacaaggggcccagcttcacccgtact
tttggaaatatgggtttcttccggcctcccagcatgcccttccaggagaagccccggctg
gtgacggacgaggacctgggggtgttcaaggaacaggacgggtcctcactgctggccctc
aggagcctccaggagctcgacctgtctgcctgctccaaactcactgacagcagcatcaca
caggtgctgcgttatccagacctccagcgcctctctctctccatgctgcctgagatcagt
gatgacagcctggcgtcggtggcctaccactgccgcagcctcaccagcttggcactcagc
cactgcccccagatcagtgaccagggtatcgcccgcgccgccccctacctcgccaggctg
cagcacctctatctgtcctgctgcgacgcagtcacagatagggctctctccatgctcgtc
caacactgtaagagattgcggacgctggacatctccatgtgtaaagacatctccataaca
acagtggacctcctccaatcccagctgcccttcctagagaatgtccactgccgctttgtg
ggcggagctgatctgaccctcacactctga
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