KEGG   Oncorhynchus kisutch (coho salmon): 109889600
Entry
109889600         CDS       T09179                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04510  Focal adhesion
oki04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109889600
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109889600
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C ATG17_like
Other DBs
NCBI-GeneID: 109889600
NCBI-ProteinID: XP_020336741
Ensembl: ENSOKIG00005007399
LinkDB
Position
LG4:46293887..46330020
AA seq 1789 aa
MFIFQIATMLSAGTCVLAQVGIPEFSDVCTEGSCYPATGDLLIGRAHQLSSNSTCGLQRP
ERFCIVSHLQDEKKCFLCDSTDAYVKSVVNTTTGHRVENVVTTFAPNRLKTWWQSENGLE
KVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCAAAYPAISP
GPMQKVDDIICDSHYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNMLKITNLRVKFTK
LHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHASECAPVDGAGAGDGVEGMVHGH
CMCNHNTMGLNCEKCQDFYHELPWRPAKGRNTNACKKCNCNQHSGSCHFDMAVYVSTGNV
SGGVCDECQHNTMGHNCEQCKPFYYQHPERDIRDPSICEPCNCDPVGSLNGGICDRMTDV
SSGLITGQCRCKPNVEGERCDQCQQAHYGLGDHPLGCLACTCNTLGTVPGGSPCHTDSGD
CFCKSLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGALNNDCSQETGQCACREHMFGR
RCDQVESGFYFIALDHYTYEAEDAKFGPGLTVVQRPRPQDRSPTWTGIGFVNVPEGAYLE
FSIDNIPHSMEYDVLIRYEPQLPDQWEEVLMTVMRPSLISADSRCANTMPDDDNQMISLH
PGSRYMVLPRPVCFEEGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGS
VGGDVATNSAWDTFQRYRCLENSQSVVKTPSTDICRNFIFSVSALLHRGAKACQCDPQGA
LSTVCAASGGQCQCRPNVVGRNCDKCAPATFLFGPSGCRPCDCNPQGSEDAFCHEATGQC
VCIPGAYSGQCDRCLPGHWGFPNCRLCTCNGHTEQCDPYSGKCLGCREQTTGHNCERCLD
GYYGDPVLGSGDHCRLCMCPDGPGSGRQFAGECYRGLDSPYQVFCVCSPGYRGARCEECA
PGYYGNPHENGGQCQPCQCNNNIDMLDQESCNVRTGECLKCLYHTEGQGCHGCKLGYYGD
ALTQNCRKCVCNHLGTNPATCPVVGDCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASE
TGCDACDCDPNHSFGTSCNELSGQCSCKPGFGGKTCRECRELFWGEPEVKCNACDCDPRG
IAEQQCHKANGHCVCVEGVSGPRCDICTRGYSGTFPYCERCHQCFADWDLVVGQLTNQTH
RLVNKVNTIKASGITGPYKHTIDNMEQSAGAIRTILAQNPATQPLSEIQQLLEQATDLME
KMSNKLNLTEEALAQVSSDDNSTNTKLDSLKEDTQKLDRTVKDLLDQVEFIKNTDIRGAT
DSVAKYYQQSLAADARANASTSGPGNPVESSAILRQATEDKMNDTREEFHRRQEEHAKRL
DDLAGQLETLDLSELNVKTCGSPADASCVDSPCGGLSCVDFEGNRRCGGEGCGGLVTLAN
NAWQKTKDFDQEILTAMEEVDKLAKMVSEAKVKADEAKLSAQNVLLKTNGTKQRVDQSNE
ELRSLIRQIRDFLTQDAADLESIEAVANEVLAMQMPTTPAQLQTLTDEIRERVGDLAHVE
TILNQSSDDIQRAESLLEQARRVSKEATNVRDTAEMVKQVLEEAERAQSAAAKAIKQATT
DIKGTNDLLTSVESETVDSEYKLNNATQRLLRLERDVTLLREKTLNTSLSSEQTEKDAES
INKVAEQVKRDLDSELKDKYSTVEDLITQKAGGVANAKKRAELLQQEAKDLLLQASDKLQ
LLKDLEKSYEDNQKTLEDKANQLVDLEKSIKELLQEISHKVTVYSTCLF
NT seq 5370 nt   +upstreamnt  +downstreamnt
atgtttatatttcaaattgcgaccatgctatccgcagggacgtgcgtccttgcccaggta
ggcatacccgagttcagcgatgtatgcacggaggggagctgctacccggctaccggagac
cttctcattggcagagcacaccagctctcctccaactccacatgtggcctccaacggccc
gagcggttctgtatcgtcagtcatttacaggatgagaagaaatgctttttgtgtgactcc
accgatgcctacgtcaaaagcgtggtgaacaccaccaccggccaccgggtggagaacgtc
gtgaccacattcgcccccaaccgcttgaaaacctggtggcagtcagagaatggtcttgag
aaagtgaccatccagctgaacttggaggcggagtttcatttcacccacctcatcatgacc
ttcaagaccttccggcctgctgctatggtgatcgagcgctcggctgactttgggaagaac
tggcaggtgtaccgctactttgcatacgactgcgcggcggcataccctgccatatccccg
gggcccatgcagaaagtggatgacatcatctgcgattcgcattactccgacatagagccg
tcgacagagggagaggtcatcttccgagttttggatccagctttccgtattgaagacccc
tacagccccagaatccaaaacatgttgaagatcaccaacctgagggtgaagttcaccaag
ctgcacaccctgggagacaacctgctggactcccgcatggagatcaaggagaagtactac
tacgccgtctacgacatggtggtccggggtaactgcttctgctacggacacgcctccgag
tgcgcccccgtcgacggggctggggctggggatggagtggagggcatggtgcatggccat
tgtatgtgcaaccacaacaccatggggctaaactgtgagaagtgtcaggacttctaccac
gagctgccctggagaccagccaagggacgcaacaccaatgcctgtaaaaagtgtaactgt
aaccagcactcaggctcgtgtcacttcgacatggcagtttacgtctctacgggtaatgtg
agcggcggtgtgtgtgacgagtgccagcacaacaccatgggtcacaactgtgaacagtgc
aagcctttctactaccagcacccagagagggacatccgtgaccccagcatctgtgaacca
tgtaactgtgatccggtgggctccctgaacggcgggatctgtgacaggatgactgatgtg
tcatctggactgatcactggccagtgtcgctgcaaacccaatgtggagggagaacgctgt
gaccagtgccagcaggcccactatggcctgggtgaccaccctctgggctgcctggcctgc
acctgtaataccctggggacagttcctggagggagtccgtgtcatacagactcaggagat
tgtttctgcaaaagcctggtcacagggagagactgtgaccagtgtatgcctcagcactgg
gggctcagcaatgatatggatggctgcagaccatgtgactgtgacctgggtggagccctc
aataacgactgttctcaggagactggccagtgtgcgtgtagagaacacatgtttggccgg
cgctgtgaccaggtggagtcaggcttctatttcattgccctggaccactacacctacgag
gccgaggacgccaagtttggacctggtttgacagtagtgcagagacctcgcccgcaggac
cgtagccccacctggacagggataggttttgtcaatgttcccgagggggcctacctggag
ttctccattgacaacatcccccactccatggagtacgacgtcctcatccgctatgagcct
cagttaccagaccagtgggaggaggtgttgatgacagtgatgcggcccagtttgatttca
gcagacagtcgctgtgccaacaccatgcccgatgacgacaaccagatgatatcccttcat
cccggatcacgatacatggtgctccccagaccagtgtgtttcgaggaagggatgaactac
actgttcgtctgagcctgcccctctactctgcactcagtgacgtccagtccccatataca
cttatcgactcgattgtgctgatgccccactgtaagaacctggagatcttcactggttct
gtgggaggtgacgtggccaccaacagtgcctgggacacgttccagcgttaccgctgtctg
gagaacagccagagcgtagtgaagaccccgtccacagacatctgccgtaacttcatcttc
agcgtatctgctctgctgcaccggggagctaaagcatgccagtgtgacccgcagggcgcc
ctcagcacggtgtgtgccgccagcggtgggcagtgccagtgtcgccccaacgtggtaggc
aggaactgtgacaagtgtgcccctgccaccttcctgtttggacccagtggctgcagaccc
tgtgattgcaatccccagggctcggaggatgcgttctgccacgaggctacaggccagtgt
gtgtgtatccccggggcatacagtggtcagtgtgaccgctgtctgccgggtcactggggc
ttccccaactgtcgcctctgcacctgcaacggtcacacagagcagtgcgacccctactcc
ggaaaatgcctgggctgccgagaacagaccactggacacaactgcgagaggtgtctggat
ggttactacggcgaccccgtcctgggttcaggggaccattgtcggctctgtatgtgtccg
gatgggcctggaagcgggcgacagtttgccggtgaatgttaccgcggtctggactcccct
taccaggtgttctgtgtctgcagccccgggtacagaggtgccagatgtgaggagtgtgcc
ccaggttactatggaaacccccatgagaacggtgggcagtgccaaccctgccagtgcaac
aacaacattgacatgctggatcaggagtcctgtaatgtcagaacgggtgaatgtctcaaa
tgtctctatcacaccgagggtcagggctgccacggctgcaagctgggttactatggagat
gccctcacacaaaactgcagaaagtgtgtttgtaaccacctgggcaccaatccagccacg
tgcccggtggtgggtgactgccactgtgatctgggcagcgggcagtgccagtgtctaccg
aatgtggtgggtcagcactgtgaccagtgtgcccccgacacctggaacatggccagcgag
acgggctgcgacgcctgtgactgtgaccccaaccactcatttgggacttcttgcaatgag
ctgagtggccaatgctcctgtaagcctggctttgggggtaaaacgtgtcgggagtgcaga
gagctgttctggggagaacctgaagtgaaatgcaacgcatgtgactgtgacccgcgaggc
atcgccgagcagcagtgccacaaggccaacggtcactgcgtgtgcgtggagggcgtgtct
ggtccccgctgtgacatctgcacccgtggctactctggcaccttcccctactgcgaacgc
tgccaccagtgcttcgccgactgggacctggtcgtgggtcagctgaccaatcagacccac
aggctggtcaacaaggtgaacaccatcaaggccagcggcatcaccggaccctataaacac
accatagataacatggagcagagcgccggggccataagaactatcctggcccagaacccg
gctacacagccactgtcagagatacagcagctactggagcaggccacagatctaatggaa
aagatgagcaacaagctgaacctcactgaggaggcgctggcccaggtatcatctgatgac
aacagcaccaacaccaaactggactcactcaaagaggacacccagaagctggatcgcacc
gtcaaggatctgctggaccaagtggagttcatcaagaacactgacattcggggagcgaca
gacagtgtcgccaagtactaccagcagtctctggctgcagatgctcgcgccaacgcctcc
actagtggcccaggtaaccctgtggagagctctgccattttacggcaagccacagaggac
aagatgaacgacaccagggaggagttccacaggaggcaggaagaacacgccaagagactg
gatgacctggcaggacaactggagacactggacctatcagaactcaacgtgaagacgtgt
ggcagcccagctgatgcgtcgtgtgtggactctccgtgcggggggttgagctgtgtggac
ttcgaggggaacaggaggtgcggtggcgaagggtgcggtggtctggtcaccctggccaat
aacgcctggcagaagaccaaggactttgaccaggagatcctcacggccatggaggaagtg
gacaagctcgccaaaatggtgtcggaggccaaggtgaaggcggatgaggctaagctgagt
gcccagaacgtgctgttgaagaccaacggtaccaagcagcgtgtggaccagagcaacgag
gagctgcgcagcctcatccgacaaatcagagacttcctcacacaggatgcagcggacctg
gagagcattgaggcagtggccaacgaggtgctggctatgcagatgcccaccacaccagcc
cagctccaaaccctgacagacgagatcagggagagagtaggagacctagcccacgtggag
accatccttaaccagagctccgacgacatccagagagccgagagcctactggagcaggca
cgcagagtcagtaaagaggcgacaaacgtgagggacacagcagagatggtgaagcaagtt
ctagaggaggctgagcgtgcccagagcgcagcggccaaggccatcaaacaggccaccact
gacatcaaaggcaccaatgacctcctgacctcagtggagtcggagacagtggactcggag
tacaagctgaacaacgccacccagaggctgctgcggttagagcgcgacgtcacgctgctc
agagagaagacactgaacacctcactcagctctgaacaaactgaaaaagacgcagagagc
atcaacaaagtggctgagcaggtcaaaagggatctggactcggagctgaaggataagtac
agcaccgtggaggacctgatcacacagaaggccgggggcgtggccaacgccaagaagagg
gcagagcttctacagcaggaagccaaagacctgctgctacaggccagcgacaagctgcag
ctgctgaaagatttagagaagtcgtatgaggacaaccagaagactttggaagacaaggcc
aaccagttggtggatctggagaagtccatcaaagagcttctgcaggagatcagtcacaaa
gtcactgtctacagcacctgtctgttttaa

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