Oncorhynchus kisutch (coho salmon): 109889600
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Entry
109889600 CDS
T09179
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109889600
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109889600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ATG17_like
Motif
Other DBs
NCBI-GeneID:
109889600
NCBI-ProteinID:
XP_020336741
Ensembl:
ENSOKIG00005007399
LinkDB
All DBs
Position
LG4:46293887..46330020
Genome browser
AA seq
1789 aa
AA seq
DB search
MFIFQIATMLSAGTCVLAQVGIPEFSDVCTEGSCYPATGDLLIGRAHQLSSNSTCGLQRP
ERFCIVSHLQDEKKCFLCDSTDAYVKSVVNTTTGHRVENVVTTFAPNRLKTWWQSENGLE
KVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCAAAYPAISP
GPMQKVDDIICDSHYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNMLKITNLRVKFTK
LHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHASECAPVDGAGAGDGVEGMVHGH
CMCNHNTMGLNCEKCQDFYHELPWRPAKGRNTNACKKCNCNQHSGSCHFDMAVYVSTGNV
SGGVCDECQHNTMGHNCEQCKPFYYQHPERDIRDPSICEPCNCDPVGSLNGGICDRMTDV
SSGLITGQCRCKPNVEGERCDQCQQAHYGLGDHPLGCLACTCNTLGTVPGGSPCHTDSGD
CFCKSLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGALNNDCSQETGQCACREHMFGR
RCDQVESGFYFIALDHYTYEAEDAKFGPGLTVVQRPRPQDRSPTWTGIGFVNVPEGAYLE
FSIDNIPHSMEYDVLIRYEPQLPDQWEEVLMTVMRPSLISADSRCANTMPDDDNQMISLH
PGSRYMVLPRPVCFEEGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGS
VGGDVATNSAWDTFQRYRCLENSQSVVKTPSTDICRNFIFSVSALLHRGAKACQCDPQGA
LSTVCAASGGQCQCRPNVVGRNCDKCAPATFLFGPSGCRPCDCNPQGSEDAFCHEATGQC
VCIPGAYSGQCDRCLPGHWGFPNCRLCTCNGHTEQCDPYSGKCLGCREQTTGHNCERCLD
GYYGDPVLGSGDHCRLCMCPDGPGSGRQFAGECYRGLDSPYQVFCVCSPGYRGARCEECA
PGYYGNPHENGGQCQPCQCNNNIDMLDQESCNVRTGECLKCLYHTEGQGCHGCKLGYYGD
ALTQNCRKCVCNHLGTNPATCPVVGDCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASE
TGCDACDCDPNHSFGTSCNELSGQCSCKPGFGGKTCRECRELFWGEPEVKCNACDCDPRG
IAEQQCHKANGHCVCVEGVSGPRCDICTRGYSGTFPYCERCHQCFADWDLVVGQLTNQTH
RLVNKVNTIKASGITGPYKHTIDNMEQSAGAIRTILAQNPATQPLSEIQQLLEQATDLME
KMSNKLNLTEEALAQVSSDDNSTNTKLDSLKEDTQKLDRTVKDLLDQVEFIKNTDIRGAT
DSVAKYYQQSLAADARANASTSGPGNPVESSAILRQATEDKMNDTREEFHRRQEEHAKRL
DDLAGQLETLDLSELNVKTCGSPADASCVDSPCGGLSCVDFEGNRRCGGEGCGGLVTLAN
NAWQKTKDFDQEILTAMEEVDKLAKMVSEAKVKADEAKLSAQNVLLKTNGTKQRVDQSNE
ELRSLIRQIRDFLTQDAADLESIEAVANEVLAMQMPTTPAQLQTLTDEIRERVGDLAHVE
TILNQSSDDIQRAESLLEQARRVSKEATNVRDTAEMVKQVLEEAERAQSAAAKAIKQATT
DIKGTNDLLTSVESETVDSEYKLNNATQRLLRLERDVTLLREKTLNTSLSSEQTEKDAES
INKVAEQVKRDLDSELKDKYSTVEDLITQKAGGVANAKKRAELLQQEAKDLLLQASDKLQ
LLKDLEKSYEDNQKTLEDKANQLVDLEKSIKELLQEISHKVTVYSTCLF
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgtttatatttcaaattgcgaccatgctatccgcagggacgtgcgtccttgcccaggta
ggcatacccgagttcagcgatgtatgcacggaggggagctgctacccggctaccggagac
cttctcattggcagagcacaccagctctcctccaactccacatgtggcctccaacggccc
gagcggttctgtatcgtcagtcatttacaggatgagaagaaatgctttttgtgtgactcc
accgatgcctacgtcaaaagcgtggtgaacaccaccaccggccaccgggtggagaacgtc
gtgaccacattcgcccccaaccgcttgaaaacctggtggcagtcagagaatggtcttgag
aaagtgaccatccagctgaacttggaggcggagtttcatttcacccacctcatcatgacc
ttcaagaccttccggcctgctgctatggtgatcgagcgctcggctgactttgggaagaac
tggcaggtgtaccgctactttgcatacgactgcgcggcggcataccctgccatatccccg
gggcccatgcagaaagtggatgacatcatctgcgattcgcattactccgacatagagccg
tcgacagagggagaggtcatcttccgagttttggatccagctttccgtattgaagacccc
tacagccccagaatccaaaacatgttgaagatcaccaacctgagggtgaagttcaccaag
ctgcacaccctgggagacaacctgctggactcccgcatggagatcaaggagaagtactac
tacgccgtctacgacatggtggtccggggtaactgcttctgctacggacacgcctccgag
tgcgcccccgtcgacggggctggggctggggatggagtggagggcatggtgcatggccat
tgtatgtgcaaccacaacaccatggggctaaactgtgagaagtgtcaggacttctaccac
gagctgccctggagaccagccaagggacgcaacaccaatgcctgtaaaaagtgtaactgt
aaccagcactcaggctcgtgtcacttcgacatggcagtttacgtctctacgggtaatgtg
agcggcggtgtgtgtgacgagtgccagcacaacaccatgggtcacaactgtgaacagtgc
aagcctttctactaccagcacccagagagggacatccgtgaccccagcatctgtgaacca
tgtaactgtgatccggtgggctccctgaacggcgggatctgtgacaggatgactgatgtg
tcatctggactgatcactggccagtgtcgctgcaaacccaatgtggagggagaacgctgt
gaccagtgccagcaggcccactatggcctgggtgaccaccctctgggctgcctggcctgc
acctgtaataccctggggacagttcctggagggagtccgtgtcatacagactcaggagat
tgtttctgcaaaagcctggtcacagggagagactgtgaccagtgtatgcctcagcactgg
gggctcagcaatgatatggatggctgcagaccatgtgactgtgacctgggtggagccctc
aataacgactgttctcaggagactggccagtgtgcgtgtagagaacacatgtttggccgg
cgctgtgaccaggtggagtcaggcttctatttcattgccctggaccactacacctacgag
gccgaggacgccaagtttggacctggtttgacagtagtgcagagacctcgcccgcaggac
cgtagccccacctggacagggataggttttgtcaatgttcccgagggggcctacctggag
ttctccattgacaacatcccccactccatggagtacgacgtcctcatccgctatgagcct
cagttaccagaccagtgggaggaggtgttgatgacagtgatgcggcccagtttgatttca
gcagacagtcgctgtgccaacaccatgcccgatgacgacaaccagatgatatcccttcat
cccggatcacgatacatggtgctccccagaccagtgtgtttcgaggaagggatgaactac
actgttcgtctgagcctgcccctctactctgcactcagtgacgtccagtccccatataca
cttatcgactcgattgtgctgatgccccactgtaagaacctggagatcttcactggttct
gtgggaggtgacgtggccaccaacagtgcctgggacacgttccagcgttaccgctgtctg
gagaacagccagagcgtagtgaagaccccgtccacagacatctgccgtaacttcatcttc
agcgtatctgctctgctgcaccggggagctaaagcatgccagtgtgacccgcagggcgcc
ctcagcacggtgtgtgccgccagcggtgggcagtgccagtgtcgccccaacgtggtaggc
aggaactgtgacaagtgtgcccctgccaccttcctgtttggacccagtggctgcagaccc
tgtgattgcaatccccagggctcggaggatgcgttctgccacgaggctacaggccagtgt
gtgtgtatccccggggcatacagtggtcagtgtgaccgctgtctgccgggtcactggggc
ttccccaactgtcgcctctgcacctgcaacggtcacacagagcagtgcgacccctactcc
ggaaaatgcctgggctgccgagaacagaccactggacacaactgcgagaggtgtctggat
ggttactacggcgaccccgtcctgggttcaggggaccattgtcggctctgtatgtgtccg
gatgggcctggaagcgggcgacagtttgccggtgaatgttaccgcggtctggactcccct
taccaggtgttctgtgtctgcagccccgggtacagaggtgccagatgtgaggagtgtgcc
ccaggttactatggaaacccccatgagaacggtgggcagtgccaaccctgccagtgcaac
aacaacattgacatgctggatcaggagtcctgtaatgtcagaacgggtgaatgtctcaaa
tgtctctatcacaccgagggtcagggctgccacggctgcaagctgggttactatggagat
gccctcacacaaaactgcagaaagtgtgtttgtaaccacctgggcaccaatccagccacg
tgcccggtggtgggtgactgccactgtgatctgggcagcgggcagtgccagtgtctaccg
aatgtggtgggtcagcactgtgaccagtgtgcccccgacacctggaacatggccagcgag
acgggctgcgacgcctgtgactgtgaccccaaccactcatttgggacttcttgcaatgag
ctgagtggccaatgctcctgtaagcctggctttgggggtaaaacgtgtcgggagtgcaga
gagctgttctggggagaacctgaagtgaaatgcaacgcatgtgactgtgacccgcgaggc
atcgccgagcagcagtgccacaaggccaacggtcactgcgtgtgcgtggagggcgtgtct
ggtccccgctgtgacatctgcacccgtggctactctggcaccttcccctactgcgaacgc
tgccaccagtgcttcgccgactgggacctggtcgtgggtcagctgaccaatcagacccac
aggctggtcaacaaggtgaacaccatcaaggccagcggcatcaccggaccctataaacac
accatagataacatggagcagagcgccggggccataagaactatcctggcccagaacccg
gctacacagccactgtcagagatacagcagctactggagcaggccacagatctaatggaa
aagatgagcaacaagctgaacctcactgaggaggcgctggcccaggtatcatctgatgac
aacagcaccaacaccaaactggactcactcaaagaggacacccagaagctggatcgcacc
gtcaaggatctgctggaccaagtggagttcatcaagaacactgacattcggggagcgaca
gacagtgtcgccaagtactaccagcagtctctggctgcagatgctcgcgccaacgcctcc
actagtggcccaggtaaccctgtggagagctctgccattttacggcaagccacagaggac
aagatgaacgacaccagggaggagttccacaggaggcaggaagaacacgccaagagactg
gatgacctggcaggacaactggagacactggacctatcagaactcaacgtgaagacgtgt
ggcagcccagctgatgcgtcgtgtgtggactctccgtgcggggggttgagctgtgtggac
ttcgaggggaacaggaggtgcggtggcgaagggtgcggtggtctggtcaccctggccaat
aacgcctggcagaagaccaaggactttgaccaggagatcctcacggccatggaggaagtg
gacaagctcgccaaaatggtgtcggaggccaaggtgaaggcggatgaggctaagctgagt
gcccagaacgtgctgttgaagaccaacggtaccaagcagcgtgtggaccagagcaacgag
gagctgcgcagcctcatccgacaaatcagagacttcctcacacaggatgcagcggacctg
gagagcattgaggcagtggccaacgaggtgctggctatgcagatgcccaccacaccagcc
cagctccaaaccctgacagacgagatcagggagagagtaggagacctagcccacgtggag
accatccttaaccagagctccgacgacatccagagagccgagagcctactggagcaggca
cgcagagtcagtaaagaggcgacaaacgtgagggacacagcagagatggtgaagcaagtt
ctagaggaggctgagcgtgcccagagcgcagcggccaaggccatcaaacaggccaccact
gacatcaaaggcaccaatgacctcctgacctcagtggagtcggagacagtggactcggag
tacaagctgaacaacgccacccagaggctgctgcggttagagcgcgacgtcacgctgctc
agagagaagacactgaacacctcactcagctctgaacaaactgaaaaagacgcagagagc
atcaacaaagtggctgagcaggtcaaaagggatctggactcggagctgaaggataagtac
agcaccgtggaggacctgatcacacagaaggccgggggcgtggccaacgccaagaagagg
gcagagcttctacagcaggaagccaaagacctgctgctacaggccagcgacaagctgcag
ctgctgaaagatttagagaagtcgtatgaggacaaccagaagactttggaagacaaggcc
aaccagttggtggatctggagaagtccatcaaagagcttctgcaggagatcagtcacaaa
gtcactgtctacagcacctgtctgttttaa
DBGET
integrated database retrieval system