Oncorhynchus kisutch (coho salmon): 109889614
Help
Entry
109889614 CDS
T09179
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109889614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109889614
03036 Chromosome and associated proteins [BR:
oki03036
]
109889614
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109889614
Coactivators
SAGA/TFTC/STAGA complex
109889614
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109889614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
109889614
NCBI-ProteinID:
XP_020336767
Ensembl:
ENSOKIG00005011406
UniProt:
A0A8C7FDA3
LinkDB
All DBs
Position
LG4:47156310..47190606
Genome browser
AA seq
1004 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLVSQKTSPATFSDIKREGSTGTVSQFSGK
VRDQVGSLEPPQQGHPKAVLNAEPCANQAISNKSITASTSSITTGGIINAGTNLQTHGAA
SRIISPAPPGSVTLPAQTTSYNRGTVLGPAETSVVTAPNSNLTTTTAIRTPSPGLQSFNG
SPGAVKLVNSPAAAPQIGLGGNTVISTASAGNSNIIVSMASQPPSLPNYPVSQSAVAFVT
PTVALQRHPNPMASASQNGVIDPKVSAVVTQGAGSPGATTSQVMNRNNTLINTTMVAPNQ
PVSAGQSIILGGSPSPVVVNSPISQAQSVASPTLAAGVKPTVNGVGQPTVTIVRPPGAPV
MATSVQQQRPGLVASPTRTVAPQMVVRPPQQTTIQLPPGFTIPPGMVLVRTDTGQLVMVP
QQVLAQAQAKTQQGQAAVSNICPRPATPTAGTTIRVGTPSQAPCTTQAVRLASPVQARML
QSPSPTSSAIQKAITMAPAGASVSMKMTTPQKAQTVITGGQALAKPGAVRPSITLNTAAA
ASASTTPTMVTAPVSQEMQENVKKCKNFLSTLIKLASHNSPSPDTSKNVKGLVQDLLDAK
IEPEEFTTRLQAELKSSPQPYLIPFLKKSLPALRLSLLNNQQTLLASTNASALAAASTTT
TSAIRARLPTTISPATGIVRTPTTSLGVRRPGVQGVQTRMPMVIPQTIRPQGTVARGLTI
IAGRSPVGIGAQASANQKKLNEPGGGTFRDDDDINDVASMAGVNLNEENARIMATNSELV
GTKIRSCKDEAFLPPGLLHRRIMETAKRFGVTEVPAEAVNYISHATQARLRSVLEKVSTI
AQHRTDGGKDEEWYEPSTDVRAQLRFFEQLDRMEKQRKDEQEREVLLKAAKSRARQEDPE
QARLKAKAKEMQQAEQAQIRQREANLTALAAIGPRKKRKMDSPGSSTSGTEVALGSGAGS
STAASSRQQLRQRITRVNLRDFIFCLEQERVTSRSLLLYKALLK
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtagacgaaaaagca
gtaagtgacttagttggctctttggaatcgcaacttgtcagccagaagacttcgcccgcc
acattttccgatatcaagcgagaaggatctacgggcactgtcagccagttctcagggaaa
gtgcgtgatcaagtggggtctctggagccgccacaacaaggacacccaaaagcggtgtta
aacgcggaaccctgtgcgaatcaggcgatttcgaacaagagtatcaccgcttctacctct
tccatcactactgggggcattataaacgctggtaccaatttacaaacacatggagccgca
tctcgcatcatttccccagcaccaccaggatcggtaactttgcctgctcagacgactagc
tacaacagagggactgttttgggtccagctgaaacatcggtggtgactgctccgaactca
aacctcacaacaacaacggctatcaggactccttcacctggattacagagttttaacggt
agccccggagctgtgaagttggtcaactcgccagctgctgctccccaaatcgggttaggc
ggcaacactgttataagtactgccagtgcgggcaactcaaatatcattgtgtctatggct
tcacagcctccttctctaccaaactatcctgtatctcaatctgctgtggcatttgttact
cccactgttgcattgcaaaggcatcccaaccccatggccagtgcctcacagaacggagta
atagaccctaaggtttctgcagtggtcacacagggtgcaggttctccaggggccaccacc
tctcaggtcatgaaccgcaataacactcttattaacactacaatggtggcacccaaccag
ccagtctctgctggccaatcaatcattctcggagggtctccctctcctgttgttgtgaac
tcgcccataagccaggcacagagtgtggcgagtcccactctcgcagccggggtgaaacca
acggttaacggagttggtcagcccactgtgaccatcgtgaggccccccggtgctcctgtg
atggccacctccgtgcagcagcagagacctgggctggtagcgagtcccacgaggactgtg
gcaccacagatggtcgtcagaccaccacagcagaccaccattcagttaccccctggattt
accatacctcccggtatggtgctggtgcgtacagacacaggccagctggtaatggttcct
cagcaggttctagcccaggctcaggctaagacccaacaaggccaggctgctgtctctaac
atctgcccccggcctgctacacctaccgctgggaccaccatcagagtcggtactcccagc
caggccccttgtacaacccaggctgttcgtctggcctcccctgtccaggccagaatgttg
cagtccccctctcccaccagctctgctatacagaaggcgataaccatggctcctgcaggt
gcgtctgtgtcgatgaagatgaccacccctcagaaagcccagacagtgatcacagggggt
caagctctggccaagcctggtgctgtacggccctctataacccttaacactgcagcagca
gccagtgcctccacaacccctacaatggtaactgcaccagtctcccaggaaatgcaagaa
aatgtgaagaagtgcaagaacttcctgtccaccctgatcaagctggcgtcccacaactcc
ccatctccagacacatccaagaacgtcaagggcctggtgcaggatcttctggatgctaaa
atcgagcctgaggagttcaccacacgtctgcaggctgagctgaagtcctctccccagccg
tacctcatccccttcctcaagaaaagccttcctgccctgcggctgtccctgctcaacaac
cagcagactctgctggcctccaccaacgcttctgccctggccgctgcctccactactacc
acgagcgctatcagggcccggctccccaccaccatcagccccgccacaggcattgtcagg
acacccaccacttctctgggtgtgagaagaccaggggttcagggggtccagactcgcatg
ccgatggtcatccctcagaccatccggccacaaggcacagttgcaagaggactcactatt
attgcaggcagatcccctgtgggcattggtgcccaggcctctgccaatcagaagaagctg
aatgagcctggaggcgggacgttcagggatgatgatgacatcaacgacgtggcgtccatg
gcgggggtgaacctgaacgaggagaacgcccgcatcatggccaccaactctgagctggtg
ggcaccaagatccgctcctgtaaggacgaggccttcctcccgccaggcctgctgcacaga
cgcatcatggagaccgccaagaggtttggggtgacagaggtcccagctgaggcagtgaac
tacatctcccatgccacccaggccaggctgagatccgtgctagagaaagtgtcaactatc
gcccagcaccgcactgacgggggcaaggatgaggagtggtatgagccgtcgacagacgtc
agggcccagctccgcttctttgagcagctggacaggatggagaaacagaggaaggacgag
caggagagggaggtcctactcaaagctgccaagagtcgcgccaggcaggaggacccagag
caagctcggttgaaggcgaaagctaaagagatgcagcaggcggagcaggcccagatccgg
cagcgcgaagccaacctcactgccctggctgccatcggtccccgcaagaaacgcaagatg
gactcgccagggagctccacatcgggcacagaggttgctttgggttcaggggctggctct
tccacagccgcctcctcccgccaacagctccgtcagcggatcacgcgagtcaatctcagg
gactttatcttctgcctggagcaggagagggtcacatcccggtccttactgctctataag
gctctcctgaagtag
DBGET
integrated database retrieval system
