Oncorhynchus kisutch (coho salmon): 109889681
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Entry
109889681 CDS
T09179
Name
(RefSeq) nuclear receptor subfamily 2 group C member 1 isoform X1
KO
K08543
testicular receptor 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109889681
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109889681
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
109889681
Nuclear receptors [BR:
oki03310
]
2. Hepatocyte nuclear factor 4 like
2C. Testicular receptor
109889681
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
109889681
NCBI-ProteinID:
XP_020336876
Ensembl:
ENSOKIG00005005830
LinkDB
All DBs
Position
LG4:52308372..52331828
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AA seq
619 aa
AA seq
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MDRQTQRIQLVSADGGMMGHRIQIVTDQSTGQKIQIVTALEQGSGGKQQFILANADYSTA
GKVILAKQEASSPGKVILAAPDGSGVNQLLFASPDLAGQQIQFVTEGSDQALSKPVVEYC
VVCGDKASGRHYGAVSCEGCKGFFKRSIRKNLVYTCRGSGECVINKHHRNRCQYCRLQRC
MVLGMKQDSVQCERKPVEVSREKSINCAASTEKIYIRKNLCSPLAATPTFVTDKETARYY
KETARSTSLLESSMLLNIQQPFPKLENTILLPTSPESNDPCQGDLSTLANVVTSLAHLNK
AREMSDITDGNDLMGVDDTLSNGDSSMTDLQGDEQTASDITRAFDTLAKALNPGDGSAGD
SLEATLQLMSGDQSGPVVELEGPLLSDSHVPFKLMMPLPMPEYLNVNYICESASRLLFLS
MHWARSIPAFQALGGLDNDINLMKACWNELFALGLAQCANVMNVATILAAIINHLQTSLQ
EEKLSPERVKLVMEHIWRMQEFCNSMAKLSPDSYEYAYLKAIVLFSPDHPGIDNTLQIER
FQEKAYMELQDYVTRTYPEDSYRLSKLLLRLPALRLMSAAVTEELFFAGLIGNVQIDSII
PYILKMESTDYNSQVATGV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggacagacagactcagaggattcagctggtgtcagctgatggtggcatgatgggacac
cgtatccagattgtgacagaccagtccacgggccagaagatccagatcgtcactgcattg
gagcagggttctggtgggaagcagcagttcatcctggctaacgcagactactccacggca
ggcaaggtaatcctagccaaacaagaggcctcgtccccaggcaaggtgatcctggcggcc
ccagacggttcaggggtaaatcagctgctgtttgcctcccctgacctggctggccagcag
atccagtttgtgacggaagggtcagaccaggccctttccaagcccgtggtggagtactgt
gtggtgtgtggagacaaggcctcaggtcgtcactatggggcagtgagctgtgagggctgt
aagggtttcttcaagcgcagcatcaggaagaacctggtttatacatgcagggggtccgga
gagtgtgtcatcaacaagcaccacaggaaccgctgccaatactgcagacttcagcgctgc
atggtcctgggcatgaaacaggactccgttcagtgtgagaggaagccggtggaggtatcc
agagagaagtctatcaattgtgctgcatctacggagaagatctacatcaggaagaacctg
tgtagtcctctggctgccacgcccaccttcgtcaccgacaaggaaaccgccaggtactac
aaggagacagccagatcaaccagtttgctggagtcgagcatgctcctcaacatccagcag
ccattccccaagctggagaacaccatcctgctcccgacatcccctgaatcgaatgaccca
tgtcagggtgacctgagcaccctggccaacgtggtgacatcactggctcacctgaacaag
gcccgggagatgagcgacattacagacggcaatgacctaatgggtgtggacgacaccctt
agcaacggagacagctcaatgacggatctccaaggagacgaacagaccgccagtgacatt
acgcgagcgtttgacaccctggccaaggccttgaatcctggtgatggctcagcgggagac
tctctggaggccacgttgcagttgatgtcaggggaccagtcaggccctgtggtggagctg
gaggggccccttctctcagacagccacgtccctttcaagttgatgatgcctttgcccatg
cctgagtacctaaacgtgaactacatctgtgagtcggcctcaagactcctcttcctgtcc
atgcactgggcgcgctccatacctgcctttcaagccttgggtggtctcgataatgacatt
aacctgatgaaggcttgttggaacgagctgtttgctctgggcctggctcagtgcgccaac
gttatgaatgtcgccaccatcctggctgccatcatcaaccacttgcaaaccagcctacaa
gaagagaagctgtccccagagcgagtgaagctggtgatggaacacatctggaggatgcag
gagttctgtaacagcatggccaaactgtcccctgactcgtatgaatacgcctacctcaaa
gccatcgtcctctttagccctgaccacccaggcattgacaacaccttacagatcgagcgg
ttccaggagaaggcttacatggagctacaggactatgttaccaggacctacccagaagac
tcctatcggttatccaaactgctgctgcgtctcccggccctgcggctgatgagtgcagcg
gtgacagaggagctgttcttcgctggcctcatcggcaacgtgcagatagacagcatcatc
ccgtacatcctcaagatggagtccactgactacaacagccaggtggccactggagtctga
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