Oncorhynchus kisutch (coho salmon): 109889707
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Entry
109889707 CDS
T09179
Symbol
wdr11
Name
(RefSeq) WD repeat-containing protein 11
KO
K24260
WD repeat-containing protein 11
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109889707 (wdr11)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oki03037
]
109889707 (wdr11)
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Others
Others
109889707 (wdr11)
Cilium and associated proteins [BR:
oki03037
]
Other cilia and associated proteins
Other cilium assembly proteins
109889707 (wdr11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
Beta-prop_WDR11_1st
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
WD40_WDHD1_1st
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
RAB3GAP2_N
TPR_GEMI5
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
109889707
NCBI-ProteinID:
XP_020336920
Ensembl:
ENSOKIG00005014734
UniProt:
A0A8C7FXI2
LinkDB
All DBs
Position
LG4:56197454..56338924
Genome browser
AA seq
1242 aa
AA seq
DB search
MIPYSVNIKLAARTLTGTLNLQNKTAVDWGWQGLIAQGCHSSILIIDPKTSQTIQVLERH
KANVVKVKWSRENYHHSLSSPYSLRLASADSAGKIIVWDVVSGTAHCEIQEHSKPIQDMD
WLWTQDASRDLLLAIHPPNYIVLWNGDTGTKLWKKSYAENILSFSFDPFDPSNLALLTSE
GIVFISDFSHSKPPGSGGKKVYIASPHASPAHTKPVPAALPAPTGAKKALNKVKVLITNE
KPTAEAVTLNADCLQLSYLPSKRNHMLLLYPREILILDLELSQTVGVVAIERSGVPFIQV
IPCAQRDALFCLHENGCITLRVCRSTTAPDESVAASDPEQSVQELVYDLRSQCDAIRVTK
TVRPYRMVICPVNENNAALTVSDGRVMLWELKAHVSKPTVNPSSGVSPLYAPVAFCGSPL
GQNQKKIQDLSLNTMIGQSLVSGADPPPPSLQQEVQLKFLLTGLLSGLPLPPFALRMCPP
LTTKNINHYQPLLAVGTSNGSVLVYNLTSGLLHKDLSVHSCEVKGIEWVSLTSFLSFATS
TPNNAGLVRNELQHVDLPTGRCFAFRGEQGNDEPAIEMMKVSHLKQYLVVVFRDKPLELW
DVRTGTLLREMAKNFPTVTALEWSPSHNLKSLKKKQLLAREAMARYTTLSDTEQSSVESS
VISLLQDAESKSEGGGQAISAREHFVFTDTDGQVYHITVEGNTVKDGARIPPDGSMGSIA
CIAWKGDTLVLGDVDGNLNFWDLKARLSRGIPTHRGWVKKIRFAPGKGNQKLLVMYTDGA
EVWDTKEVNMVSSLRIGRNVNYRILDIDWCTSDKVVLASEDGCIRVLEMAMKSASYRMDE
QDLTDPVWCPYLLLPRAALTLKAFLLLQPWSGTFTMDITQVDYTEKHEIKGLIQEQLNSM
SNDMKSVLLDPELNLLQRCLLVSRLFGDESDLQFWTVAAHYLQSFAQARHLSVPVPEGQT
PAEGTQATPQGHLDIYHDTLCESFYFQRFQLERVHLQEVKRSSYEHTKKCADQLLLLGQT
DRAVQLLLETSADNPSYYCDSLKACLVTTITSSGPSQSTIKLVATNMIANGKLAEGVQLL
CLIDKAADACRYLQTYGEWNRAAWLAKVRLNPAESSDVLKRWAEHLCSPQVNQKSKAILV
LLSLGCFHKVGEMLQSMRYFDRAALFIEACLKYGVMEANDSTNKLIGAAFVDYARLLRTL
GLRESAAFWASRAGGAGEQLLEELFQGEGAVPEETEGLENTE
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgattccttactctgtcaatattaaactcgcggcgcggacattgactggaacgcttaat
ttgcagaacaaaactgctgttgactggggttggcaggggctgatagcccagggatgtcac
tccagcatcctcatcatcgacccaaagacttcccagaccatccaggttctggagcggcac
aaagccaatgtggtcaaggtgaaatggtccagggagaactaccaccacagcctgagctcg
ccctactctctgaggctggcctctgccgattcagcagggaagattatcgtgtgggatgtg
gtgagtggcacggcccactgtgagatccaggagcactccaaacctatccaggatatggac
tggttgtggactcaggatgcttcacgtgatcttctcctggccatccatccacctaactac
atagtcctatggaacggagacacagggaccaagctgtggaagaagagctatgcagagaac
atcctctccttctcttttgacccgttcgatccatccaacctagcattgctgaccagcgaa
ggcattgtcttcatctccgacttctctcactccaaacccccgggcagcgggggtaagaag
gtctatatcgccagcccccatgccagccctgcccacactaagcctgtgcctgctgccctc
cctgcccctaccggtgccaagaaggccctgaacaaggtcaaagtgctcatcaccaacgag
aagccaacagcggaggctgtgaccctgaatgcagactgcctgcagctgtcctacctgccc
tccaagaggaaccacatgctgctgctctaccccagagagatcctcatcctggaccttgag
ctcagccagaccgtgggtgtggtggccattgaacgctctggggttcccttcattcaggtg
atcccctgtgcccaaagagacgctctcttctgtctccacgagaacggctgcatcactctg
agggtgtgtcgctccaccactgcacccgacgaatcagtagctgcgtcagatccagagcag
agtgtccaggagctggtgtatgacctgcgttcccagtgtgatgccatcagggtcaccaag
accgtgcgaccttaccggatggtcatctgtccagtcaatgagaacaacgccgccctgacg
gtcagcgacggccgtgtcatgctgtgggagctcaaagcccacgtgtccaagcctacggtc
aaccctagctctggtgtgtcccccctctacgctcctgtggcattctgtggttcaccactg
ggtcagaaccagaagaagattcaggacctgtctcttaacaccatgatcggtcagagtttg
gtttcaggagcagacccaccacccccatcactgcagcaggaggtacagctgaagttccta
ttgacggggctactgtcggggcttcccctgccccccttcgccctgaggatgtgcccccca
ctgaccaccaagaacatcaaccactaccagcccctactggctgtgggtaccagtaatggg
tcagttctggtctataacctcaccagtggtcttctgcacaaggacctgagtgtccactcc
tgtgaagtcaaaggcatagaatgggtcagtctcaccagcttcctctcctttgccacttca
acccccaacaatgctggactggtgaggaatgagcttcagcacgtcgaccttcccactggc
aggtgctttgcattccgaggcgaacaggggaatgacgagcctgccattgagatgatgaaa
gtgtctcatctgaagcagtacctggtggtggtgttcagagacaagcctctggagctgtgg
gatgtcaggactggtaccctgctacgagagatggccaagaacttccccactgtcactgca
ctggagtggtccccctcccacaacctgaagagtctgaagaagaaacaattgttagcacgg
gaggccatggccagatataccactctgtctgacaccgagcagagcagcgtggagtcctcc
gttatcagtcttctgcaggatgcagaaagtaaatcggagggaggaggccaggccatctca
gcgagggaacactttgtgttcacagacacagacggacaggtgtaccacatcactgtcgag
gggaataccgtcaaagacggtgcccgcattcccccagacggcagtatgggtagcattgcg
tgcatcgcctggaagggagacactctggttctcggtgatgtggacgggaacctcaacttc
tgggacctcaaggcccgtctctccagggggatccctactcaccgtggttgggtgaagaag
atccgtttcgcacctgggaaagggaaccagaagctactggtcatgtacacagatggggca
gaagtctgggacaccaaagaggtgaacatggtaagcagcctgcggattggtcggaacgtg
aactatcgtatcctggacatcgactggtgcacctctgacaaggtggtgttagcctctgag
gacggctgcatccgtgtgctggagatggctatgaagtctgccagctacaggatggatgaa
caagacctgaccgatcctgtgtggtgtccatacctgctgctcccccgtgctgccctcacc
ctgaaggccttcctcctgctgcagccctggtctggcacattcaccatggacatcacacaa
gtggattacactgaaaaacatgagattaagggcctgatccaggaacagctcaactccatg
tccaatgacatgaaaagcgtcttgctggatcccgagctcaacctgctgcaacgctgcctc
ctggtgtctcggctgtttggggacgagtcggacctgcagttctggacggtggcagcccac
tacctccagtcgttcgcccaggctcgccacctcagtgtgcccgtccccgagggccagacc
ccagccgaggggacccaggccaccccacagggccacctggacatctaccacgacaccctg
tgtgagagcttctacttccagaggttccagttggagcgagtccatctacaggaggtgaag
aggtccagttatgaacacaccaagaagtgtgctgaccagctcctcctgctgggacagacg
gaccgagcggtgcagttgctgttggagactagtgctgacaaccccagttactactgtgac
tcactgaaggcgtgtctggtgaccaccatcacctcctcagggccctcccagagcaccatc
aaactagtggccaccaacatgatcgccaacggcaaactggcagagggagtgcaactgctg
tgtttgattgacaaggctgcggacgcatgccgatacctgcagacctatggggagtggaac
cgcgctgcctggctggctaaggtgcgtctgaacccggcagagagctcagacgtgctaaag
cgttgggcagagcacctctgctccccccaggtcaaccagaagtctaaggccatcctagtg
ctgctatccttgggctgcttccataaagtaggagagatgctacaaagcatgaggtacttt
gaccgtgcggcgctcttcattgaagcctgtctgaagtacggagtgatggaggccaacgat
tccaccaataagctgatcggggctgcgttcgtggactacgcccgactactgcgcaccctg
ggcctgagggagagtgccgcgttctgggcatcgcgggcaggtggtgccggagagcaactg
ctggaagaactcttccagggagagggggcagtgcccgaggaaacggagggcctggagaac
acagagtga
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integrated database retrieval system