Oncorhynchus kisutch (coho salmon): 109889714
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Entry
109889714 CDS
T09179
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109889714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109889714
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
109889714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
109889714
NCBI-ProteinID:
XP_020336942
Ensembl:
ENSOKIG00005024366
LinkDB
All DBs
Position
LG4:complement(57204523..57273025)
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AA seq
578 aa
AA seq
DB search
MLPSQAGSAQSGNGSASFRDNTGHGSGVIGIRPVLVRARQSKTRVSDSISAVGMLRGNGP
GVGARGGARPGNGTGPTIPQTAAQGGIGLNMGIGVRGGSRYDPDKECAPMGCSGSDADSD
SGDEDDPMGSIGDNRRSVKRERLEMEAAVTGQEAGIPPGGYGVVPQGVAGAKPGKKTRGR
VKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ
PMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSESESLGETKDQL
KPAFTVASLPGTTSTHAPTAPTTSTTMQVSSGPSFPITNYLAPISASSNVNGTVLKTTGA
SGGQVMQLPSGFTFMSAGTSLPPGTPTIPLSQLHQHTLAIPGQRGQKLTASQLTQQGQQA
VFRFPAAVSLGGGMTQQLQAIQVHPTTHTNDSSSEISQTSTVSTATIVTSSVPTSMAGHM
MYTSPHTVMYASSPSAMQVSHGQGQDTGETTLDYSRLRWDTGAVPQVFLTAPSGTMQIPV
SAVQLHPMVIGQQLSSSSSNLTELQVVSLDTTQNTKND
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgctaccaagccaggctggatcagcacaatctggaaacgggtcagcgtctttcagggat
aacacaggtcacggttctggggtgattgggattcgccctgtgttggtcagagcaaggcaa
tcgaaaactcgggtcagcgacagcatcagtgcggtggggatgttgaggggcaacggtcca
ggagtgggtgcaagaggtggggcgagaccagggaacgggacgggaccgacgattccacag
accgctgctcagggaggcatcggtctgaacatgggaattggggttcgcggaggcagccgc
tacgacccggacaaagagtgtgcgccaatgggttgcagtgggtcggacgctgattcagac
tcgggggatgaagacgatccgatgggttcaatcggggacaacagaagaagtgtaaagcgg
gagagactggagatggaggctgcggtgacagggcaggaggccgggataccaccggggggt
tatggtgtggtcccccaaggtgtcgctggcgcaaagccagggaagaagacacgtgggcgc
gtgaagataaaaatggaattcatcgacaacaagttgaggcgatacacaacttttagcaag
aggaagactggtataatgaagaaggcctatgagctttccacgttgacaggaacccaggtc
ctgctactggtggccagcgagacgggccatgtctacacatttgccacgcggaagctccag
cccatgatcaccagcgagacgggcaaggccctcatccagacgtgcctcaattctccagac
tcgcccccccgcaacgacccctccactgaccagcgtatgagcgccacaggcttcgaggag
acagaccttacctaccaggtgtctgagtcagagagccttggggagaccaaggaccagcta
aagcctgcgtttacagtggccagcctcccgggcaccaccagtacccacgcacctacggca
cccaccacatccaccaccatgcaggttagcagcgggccctccttccccatcaccaactac
ctggctcccatctccgctagcagcaacgtcaacggcacagtcctcaagaccaccggtgcc
tccggagggcaggtcatgcagctgcccagcggctttaccttcatgtcagcaggcacttct
ctccctcccggcacccccaccattccgctcagccagctgcaccagcacaccctggccatc
ccgggacagcggggccagaagctcaccgcatcacaactgacacagcagggccagcaggcc
gtcttccgattccccgctgcagtctccctagggggagggatgacccagcagctgcaggcc
atccaggtgcaccccaccacacacaccaatgacagcagctcggagatctcccagacctcg
actgtctccactgcgaccattgtcacgtcgtctgtgcccacgtccatggcggggcacatg
atgtacaccagcccccacacagtgatgtacgcgtccagcccctcggccatgcaggtgtcc
cacggacagggccaggacacaggtgagaccacgcttgactacagtaggctacgctgggac
acaggtgctgtccctcaggtattccttacggcaccctcgggcaccatgcagatccctgtt
tctgcagtgcagctacacccaatggtgattggtcagcagttgagcagcagcagcagtaac
ctgacagagctgcaggtggtcagcctggacaccacccagaacactaagaacgactga
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integrated database retrieval system