Oncorhynchus kisutch (coho salmon): 109889732
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Entry
109889732 CDS
T09179
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109889732 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109889732 (ercc6)
03400 DNA repair and recombination proteins [BR:
oki03400
]
109889732 (ercc6)
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
109889732 (ercc6)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
109889732 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
109889732
NCBI-ProteinID:
XP_020336974
Ensembl:
ENSOKIG00005030506
LinkDB
All DBs
Position
LG4:58039918..58089856
Genome browser
AA seq
1490 aa
AA seq
DB search
MPVEDTENQVPLILSNPASAALTPGGMEEDGANRGTAGCSISITGTSQGDTEQPAMACPD
STGSGEGSSAIKKSGALLHIDRQLIQAVSASSGAAELQGLGVAVYDQDVLEQGVLQQVDQ
AIHEASQAAAKAEAEKEYQSVLDDVRSCMAALKHINKIIEQLTPYATSSKDINRKMESVR
RQKENKEKQLKKIRAKQRRLQAILGGEDTLKIEAELLLEDDVDEEPGPSTLGSMLMPEQE
TEWEELIRTGHMTPFGTRVPQKEDKNEPRKFMLSENSGFDAYLADQAKMAVDRKRPAPLK
QKKKTAVGKEGKKTNEAALPSYSVDKKLQKRMRKLQRTALKAHSKAPAKRVTLIPKPRTK
LQAGGDEMDSEGSEYLPSDELMDPDREEREDRDEGWGEEDEVDYYELKPYRTKSEEKGGK
TGKRREHDEEYYPDSSEEDKGSGKKGKEKMKKDDGDVEFYKQRIRRWRRLRLREREEKRE
RGEEESDQSDAEFDEGFKVPGFLWNKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTI
QVIAFLAGLSYSKLRTRGSNYRYQGLGPTVIVCPATVMHQWVSEFHTWWPPFRVAVLHDT
GSFTQTKEKLISEMAACHGVLITSYSAVRIMQETLQRYDGWHYVILDEGHKIRNPHAGVT
TACKQFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPIFMEQFSVPITMGGYSNA
SPVQVQTAYKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEAQREVYQGY
LDSKEVYQILNGDMQVFSGLIALRKMCNHPDLFSGGPKILKGIPEDQLTEEEHFGFWKRS
GKLMVVESLLRLWFKQQHRVLLFTQSRQMLGILEVFVRENGYTYVKMDGTTTIASRQPLI
ARYNEDKSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKEVT
VYRLLTAGTIEEKIYHRQIFKHFLTNRILKDPKQRRFFKSNDIYELFTLSNPDGTQGTET
SAIFAGTGSDVQAPKKPVRPRSNHRHSVTNHNVSSTGGGAIPSPSPRPGDRTTPLRSNIS
LNKNNRLTDSQEANQGEADIPIGQSQTECDTQHSREEGSNAHILTDLDRDQNSILTHKHR
DSPVTSPNPHKHSHTNSVSPSTQKQRDKHSPHKHREPQGPGPSPYKHREKRKHCDSTVEG
PKNKHGNQKQAKVEGHRISYLVKKRSYKGQEEREEQPEKQDQRQSDDYVLAKLFKKSGIH
SVMQHDSIMEASNPDFVLVEAEANRVAKDALKALKVSRQHCRLPYNQPAPAPARKRFGQK
KNPLLSAPPATVVPAQDKCKDAAIIKKTIARKPIPGGHFSGEGVEVGGSSSTTAPLSSST
ILARMKARNHLSLPQREGDEGEEEEGGARIPSGPPAPPTEHDELLVELRNFVAFQGAVDG
QASTKEVLDHFTPRLTHTQTPVFRELLRNICNFHRAKGQEGTWRLKPDYR
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagaagatactgagaaccaggttcctcttatcctctccaacccggctagtgct
gctctcaccccgggaggaatggaggaggatggggccaacagaggaaccgctggatgctca
atctccatcactgggaccagccagggggacactgagcagcctgcaatggcctgcccagat
agcactggatctggggagggcagcagtgccattaagaagtctggagccctgctacacatt
gaccgtcagcttatccaggctgtgagtgccagctccggggctgcagagctacagggtctg
ggtgtcgccgtgtacgaccaggatgtgttggagcagggggtcttgcagcaggtggaccag
gccatacacgaagccagccaggctgcagccaaggccgaggcagagaaggagtaccagtct
gtactagacgatgtcaggtcatgtatggcagctctgaagcatattaataagatcatagag
cagctgactccctatgctacttccagtaaagacattaacaggaagatggagtctgtcaga
cggcagaaagagaacaaggagaagcaattgaagaagatcagagcaaagcagaggagacta
caggccatcctggggggagaagacacactgaagatagaggctgagctactgctggaggac
gatgtggacgaagagcccggcccatctactctgggcagtatgctgatgccggaacaggag
acggagtgggaggagctaatccggacgggtcacatgacaccgtttggaacgagggtccct
cagaaggaggataagaatgaaccacgcaagttcatgctgtctgaaaactcgggcttcgac
gcttacttggcggaccaagctaagatggcggtggacaggaagagacctgcacccctaaag
cagaagaagaagactgctgtgggcaaggaagggaaaaagaccaacgaagcggctctcccc
tcctactctgtggataagaagctccagaagcgaatgcgtaagctgcagaggaccgctctg
aaggcccactctaaggccccggctaagagggtcacgctgatccccaagcccaggacgaag
cttcaagctgggggagatgagatggacagcgaggggtctgagtacctccccagtgatgaa
ctgatggaccctgacagagaagagagggaggaccgagatgagggctggggagaggaggat
gaggttgactactatgagttaaagccctacaggacgaagagtgaagaaaaaggggggaag
acggggaaaaggagagagcatgacgaggagtattaccccgacagctcagaggaagacaag
ggttcagggaaaaagggaaaagagaagatgaagaaagacgatggagatgtggagttctac
aaacagaggatacggcggtggaggcggctgcggctgagagagagggaggagaagagagag
agaggagaggaggagagtgaccagagtgatgctgagtttgatgaaggattcaaagttcct
ggattcctctggaataaactcttcaagtaccagcagacaggtgtgaggtggctgtgggag
ctacactgccagcaggcagggggaatcctgggggatgagatgggtctgggtaaaaccatc
caagtcatcgcattcctggctggcctcagctacagcaaactacgcacacgagggtccaac
tacaggtaccaaggactaggtcctacagtgatagtgtgtccagctacagtcatgcaccag
tgggtcagtgagtttcacacctggtggcccccattcagagtggctgtcctacacgacacg
ggatccttcacccaaaccaaggagaagttgatatcagagatggcagcatgtcatggtgtc
ttgataacgtcgtattcagccgtgaggatcatgcaggagaccctgcagagatacgacggc
tggcactacgttatactggacgagggacacaagatccgcaaccctcacgctggagttacc
accgcctgcaaacagttccgtactcctcataggttcattctatctggcagtcctatgcag
aacaatctgaaggagctgtggagtctatttgactttgtcttccctggcaaactgggcacg
ctgcctatttttatggaacagttctctgtaccgatcaccatggggggctacagcaacgct
tcacctgtacaggtccagacagcgtataagtgtgcgtgtgttctgagggataccattaac
ccttacctgctcagacggatgaaggctgacgtgaaggccaacctctctttacctgacaag
aatgaacaggttttgttttgcaggctaacagaggcgcagcgtgaggtgtatcagggctat
ctggactccaaagaggtctaccaaatactgaatggggatatgcaggtgttctcgggcctg
atagcactgcgtaagatgtgtaaccacccggacctgttctctgggggtcccaagatcctg
aagggtataccagaggaccaactgactgaagaggaacactttggcttctggaaacgttcc
ggcaaactgatggtggtggaatcactgctccgactttggtttaaacagcaacacagagtc
ctgctgttcacacagtccagacagatgttggggatattggaggtgtttgtgagggagaat
ggctacacctatgtgaaaatggatggtaccaccaccatcgcctccagacagcctctcatc
gctcgatacaacgaagacaagtctatctttgtgttcttgttgaccaccagagtggggggg
ctgggagtcaacctgaccggagccaaccgagtcatcatctatgaccccgactggaaccct
agcactgacacacaggctcgagagcgagcttggaggatcggtcagaaaaaggaggtgact
gtctatagactactgaccgccgggaccattgaggagaagatctaccacaggcaaatcttc
aaacacttcctgaccaaccgcattctgaaggaccccaaacagcgacgcttcttcaagtcc
aacgacatctacgagctgtttaccttatctaaccctgacgggacgcagggcactgagacc
agcgctatatttgcaggcaccggttctgatgtccaagctcctaagaagccagtcagacca
aggtctaaccatagacactctgtaaccaatcacaatgttagctccactggaggtggagcc
atcccttccccatcgccccggcctggagacaggaccaccccccttcgcagtaacatctct
ctcaataagaacaacaggctgacggacagccaggaagccaaccagggcgaggcagatatt
cctattggacagtcccagacagaatgtgacacacagcattctagggaggagggaagcaat
gctcatatactcacagacctagacagagaccaaaactccattctgacccacaaacacaga
gactcacccgtgaccagcccaaacccacacaaacattcacacactaactccgtcagtccc
agcacacagaaacaacgagacaaacacagtccacacaaacacagagagcctcaaggaccc
ggccccagtccctacaaacaccgggagaagaggaagcactgtgactcgacagtagaagga
cctaaaaacaaacacgggaatcagaaacaggccaaggtcgagggtcatcgcatctcttac
ctggtgaagaagaggagctacaaaggacaagaggagcgcgaggagcagccggagaaacag
gaccagagacagagcgacgactatgtactggccaaactcttcaagaagtcaggtatccac
agtgtgatgcagcatgactccatcatggaggcgtctaacccagactttgtcctggtggaa
gctgaagctaacagagtagctaaagacgctttgaaagccctgaaggtctccagacaacac
tgtagactgccctacaaccaacctgccccagctccagccaggaagaggtttggtcagaag
aagaatcctttgctgtctgctcctcctgctacagttgtcccagctcaggacaaatgcaag
gacgctgccatcatcaagaaaaccatcgctaggaaacccatcccggggggtcacttcagt
ggagaaggggtagaggtgggaggctcttcctctactacggcccccctctcttcctccact
atactggcccgcatgaaagctaggaaccacctcagcctgccccagagagaaggggatgaa
ggagaagaggaagaggggggtgcccgtatcccctcaggccctcctgccccccctacggaa
cacgatgaactcctggtggagctgagaaactttgtggcattccagggagctgtggatgga
caggctagcaccaaggaggtcctggaccacttcacccccagactgacccacacccagacc
cctgtcttcagagaactactccgaaacatctgtaacttccacagggcaaaggggcaggag
gggacgtggagacttaaacctgactacagataa
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integrated database retrieval system
