Oncorhynchus kisutch (coho salmon): 109889747
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Entry
109889747 CDS
T09179
Symbol
rrp12
Name
(RefSeq) RRP12-like protein isoform X2
KO
K14794
ribosomal RNA-processing protein 12
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109889747 (rrp12)
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
90S particles
Other 90S particles
109889747 (rrp12)
Pre-60S particles
Other pre-60S particles
109889747 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
109889747
NCBI-ProteinID:
XP_020336998
Ensembl:
ENSOKIG00005034779
UniProt:
A0A8C7MUX0
LinkDB
All DBs
Position
LG4:58729262..58754346
Genome browser
AA seq
1291 aa
AA seq
DB search
MVKSGKLKSGAASKLKRWKKGHSSDSNPQTSRFRQAAKSRFFSRPSEKSDLTVDALKLHN
ELQAGTLERGVGDRGDACMEETAEQALSERSAGTFLSGLSDCSNLTFRKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTLEAVDSGESLAAVAYLLNLVMKRVPA
PVLICKFSDTAKALMDVMSTLASSESASALRWILSCLSTLLRKQDVTVWSYPSTLQTYHG
LLSFTVHSKPKIRKAAQHGVCSILRGSDLLFTDNAPTHHPAAAMAAKFCIKEIEQAGGSK
EDTTTLHVLGLLKDLMVTFPLSAVKSCCETLLRVMTLSHVLVTACAMQAFHKLFSGKPNP
VTLSAELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHVHLAGVQSSLSLGHLPRLFST
AMSCLLSPHPQVVSAATNTLKTLLSECVAPRMEEIGPVSPTASSGNPSYVCKMFRIVEEG
LSYRFHASWPFVLQLLGCFYRAAGKHTHPVMTKSLQSLADLRSTPRFPFCGELDLAVGGA
VESMGPEVLLTAVPLNITGLEDNLEFPRSWLIPVIRDHVKNTQLAYYTSYLLPLAATLRQ
RAEELEKAGQKLEAKVYKTLQLQIWTMLPGFCVGPLDLLVSFKGVARALGMAINERPDLR
LTICQAIRTLITKSCNTEEEKAEVGRFAKNFLPILFNVFSQQPAPGDIGPYRMAVLDTIK
VYLTVTDPQMVCTFLSKATERLSSPDSTEFIRLSVMDLMVAMAPCVDEVTMSQTFELIRP
YLENKEPHMQKKAYRVLEEMCGGEREECRSFVLSHLETLKHVLLGTLKNASSPAKRPRLK
CLIHIVKQLSDEHRDFITALLPEVIICTKEVSVGARKNAYTLLVEIGNAFIRFCGDAKEA
LEQYLLLVYVGLTGSVTMITCTVLALTRLVFEYKDSIDMGSMEHLLHNVCLLLTSRTREI
VKAALSFVKVILFVMDPKTLAGHVTVMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFE
LVKSKLPAEHHKVLVNIRKAEARTKRSRLADEDHDDSDSGDDKPKARGASIEEILAESDS
DMSDDERPKGAKTQKKPTKQKGRAWLKEGQGDEPLNFLDPTVSQRVLATNPDMKKRVKIQ
HNFKVTSDGRLIIKEDNDEGDKTKDDEGEMKDILEEAGVKSIKTKRRTFRDGHYDDDMEI
EPQLKYKAGGSGIHRPLGGSRDLGGDYKAKKGKGDVKRKGKVDPYAYIPLRKAQLNRRKK
AKMQGQFKGMVRGAQKGAQSGKRMQRNKRRA
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatctggaaaattaaaatctggggccgcatcgaaactgaagcgatggaaaaag
ggacacagcagcgactcgaacccccagacgagccgattcagacaggctgccaaaagccgt
ttcttcagccgcccctcggagaagagtgacctgacagttgatgcactcaagctgcacaat
gagctgcaggcaggaaccctggagaggggtgtgggtgaccggggagatgcctgtatggag
gagacggcagagcaggccctttcagagaggagcgcagggaccttcctcagcgggttgtcg
gactgctctaacctcaccttcagaaaggtgcagcgcttctgggagtccaactcagctgcc
cataaagagatatgtgcagtgctggctgcggtgactgaggtgattcgatctcagggaggg
aaggagacagaaacagagtactttgcagctctgatgaccaccctggaggcagtggattca
ggggagtctctggctgctgtagcctacctcctcaacctggttatgaaacgggttccagca
ccagtgttgatttgtaagttctctgacacggccaaagcgctgatggacgtcatgtccacc
ctggccagctcagagtccgcctccgcactcagatggatcctgtcgtgcctctccactctt
ttgcggaagcaggatgttacagtgtggagttacccgtctactctgcagacatatcacggt
ctactcagcttcactgtccacagcaagcccaagatccgtaaagcagcgcagcatggtgtg
tgttccatcctgagaggtagtgacttactatttacagacaacgccccgacccaccaccct
gctgccgcgatggccgccaagttctgcatcaaagagattgaacaggcaggaggcagtaag
gaggacaccaccaccctgcacgtcctgggtctcctgaaggacctcatggtcaccttccct
ctcagtgccgtcaagtcctgctgtgagactctgctcagggtgatgaccctcagccacgtg
ttggtgacagcatgtgccatgcaggccttccataagctgttcagtgggaaacccaaccct
gttaccctgtctgctgaactcaatgctcagattatcacggccctgtatgactacctgccc
agtgagaatgacttgcagcctctactagcctggctggctgtcatggagaaagcccacgtt
cacctggccggtgttcagtcatctctaagtctgggtcatctccctcgtctcttctccaca
gccatgtcctgcctcctgtcacctcacccacaggtcgtctctgctgccaccaatacactc
aagactctgctgtcggagtgtgtggctcctcgcatggaggagatcggccccgtcagcccc
actgcttcctctggaaacccttcctacgtctgcaagatgttccgtatcgtggaggagggt
ctgtcgtatcgtttccacgcctcctggccgtttgttctgcagttgctgggctgcttctac
agagcagcagggaaacacacacacccggtcatgaccaagtctctccagtctctagcggac
ctgcgctccaccccccggttcccgttctgtggtgagctggacctggctgtaggtggcgct
gtagagagcatgggacctgaagtactgctgaccgctgtaccgctcaacatcactggactg
gaagacaatctggagttccctcgtagttggttgatccctgtcatacgggatcacgttaag
aacacgcaactggcttactacacatcatatctcctgccgctcgctgccacgctccgacag
agagctgaggagctggagaaggctggacagaaactggaggctaaagtctacaagacactc
cagctgcagatctggaccatgctgcccgggttctgtgtgggacccttggacctgctggtg
tcgtttaaaggtgtagcaagggcactgggcatggccatcaacgaacggcctgacctacga
ctgaccatctgccaggccatacgcacactcatcaccaagagctgtaacaccgaagaggag
aaggcggaggtgggccgttttgctaagaacttcctgcccatcctgttcaacgtgttcagc
cagcagcctgctcctggagacattggcccctacaggatggctgtcctagacaccattaaa
gtctacctgactgtcacagacccacagatggtgtgtaccttcctatcgaaagctacagaa
agactcagcagcccagacagcactgagttcatacggttgtctgtcatggacctgatggtt
gccatggcaccctgtgtagatgaggtcacaatgagtcagacctttgagctgattaggcca
tacctggagaataaggagccacacatgcagaagaaggcataccgcgtattggaggagatg
tgcggtggagagagggaggagtgtagatctttcgttctctctcacctagagacgctcaaa
cacgttctgctggggacactgaagaatgcttcatctcccgccaagaggcccagactaaag
tgtcttatccacattgtgaaacagctgagtgatgaacacagagacttcatcactgccctg
ctaccagaggtgatcatatgtactaaggaggtgtcagtgggagctcgtaagaacgcctac
actctactggtggagataggaaacgcttttatcaggttctgtggagatgccaaagaagcc
ttggagcagtacctactgttggtctatgtggggctgaccggctctgtcacgatgatcaca
tgtacagtcctggctctcaccagactggtctttgagtacaaagactctatagacatggga
tcgatggagcacctcctacacaacgtgtgcctgctgctgacgtctcggaccagggagatt
gtgaaagcagcgctcagcttcgtcaaggtcatcctcttcgtcatggaccccaagacactg
gctggacacgtcactgtgatgatggagggtgttgggaacatcaaggatgacgttagaaga
cacttcaggacgaaactgaaaaacattttcaccaagttcatcaggaagtttgggtttgag
ttggtgaaaagcaagctgcctgcggagcatcataaggtgttggtgaacatccgtaaggct
gaggccagaaccaagagatcgagactggcggacgaagaccacgacgactcagacagcggg
gacgacaagccaaaagccaggggcgcgagtatcgaggagatcttggccgagtcggactct
gatatgtcagatgacgaaaggcctaagggcgctaagacccagaagaagcccacaaagcag
aaggggcgggcctggctgaaggagggacagggagacgaaccactcaacttcctggatccc
actgtctcccagagggtcttggccaccaacccagacatgaagaagagggtaaaaattcag
cacaacttcaaggtcacgtcagacggaagactcatcatcaaagaggacaatgacgaggga
gacaagactaaagatgatgagggagagatgaaagacattctggaggaggctggagtcaag
agtataaagactaagaggaggacattccgggatggtcactacgatgatgacatggagatt
gaaccccagctgaaatacaaagctggaggctcggggatccacagacctctgggtgggagc
agagacctagggggagactacaaggccaagaagggtaaaggagatgtgaagaggaaagga
aaggttgatccatatgcctacatccctctgaggaaagcacagctcaaccgcaggaagaaa
gcaaagatgcagggccagtttaaaggcatggtgagaggggcccagaagggagcgcagtct
gggaagaggatgcaaaggaacaagaggagggcctga
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integrated database retrieval system