Oncorhynchus kisutch (coho salmon): 109889753
Help
Entry
109889753 CDS
T09179
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03430
Mismatch repair
oki03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109889753 (mlh1)
03460 Fanconi anemia pathway
109889753 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109889753 (mlh1)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109889753 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
109889753
NCBI-ProteinID:
XP_020337022
Ensembl:
ENSOKIG00005001392
LinkDB
All DBs
Position
LG4:complement(59710488..59737883)
Genome browser
AA seq
723 aa
AA seq
DB search
MSGVIRRLDETVVNRIAAGEVIQRPANAIKELLENCLDAKSTNIQVTVKEGGLKLIQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLNAISTYGFRGEALASISHVAHVTITTKTADAK
CAYRATYCDGKLKTQPKPCAGNQGTQITAEDLFYNVSTRRKALKSPSEEYSRIVEVVSRY
AIHNSGKSFAVKKQGETMADVRTLPNASILDNIRVVFGNTVSRELIEVGCEDQKLAYKLK
GHISNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNSHPFLYLSLEIAPHNI
DVNVHPTKHEVHFLHEDCIIESVQKQIESKLLGSNSSRTYFTQTLLPGLSVSTSEGKSSS
NSTGDSERVYAHQMVRTDSRAQKLDAFLQPASKLAPPPTANPNGQSRGEPVTTNDMEEMD
NAEILEEQAPGATEDGERTSRNTPADLPRKRPRAGQDEEQEDLTAAATTRRRAIKLSSVK
ELRDDIAEYAHKGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNTTKLSQELFYQILIYD
FGNFGILRLSEPAPLYDLAMLALDSEESGWSEEDGPKEGLAQYIVDFLKKKSEMLEDYFS
MEIDQEGNLTGLPLLLDKYTPPMEGLPMFILRLATEVNWDNEKDCFREFSKECSQFYSIR
KQYVLEPGEEEQDAELNSWRWKVEHLLFKSFRSLFSPPKHFSEDGSVLQIANLPDLYKVF
ERC
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggtgattcggagactcgatgagaccgttgttaatcggattgctgctggagaa
gttatccaacgtcctgcaaatgctatcaaagaattgcttgaaaactgtttagatgccaag
tccaccaacatacaggtgactgtgaaggaggggggtctgaaacttatccagatacaagac
aatggcactggcatcaggaaagaagatatggaaatagtatgtgaacggtttacaacaagc
aagctccagacttttgaggacctcaacgccatctcaacctatggtttccgaggagaggca
cttgccagtatcagccatgttgcccatgtgaccataacaaccaaaacggctgacgccaag
tgtgcttacagagccacctactgcgatgggaaactaaagacccaacccaaaccctgcgct
ggaaaccaggggacacagatcactgcggaggatctgttttataacgtgtccaccaggagg
aaagcactgaagagccccagtgaggagtactccaggattgtggaggtggtgagcaggtat
gccatacacaactctgggaaaagctttgctgtcaaaaagcaaggcgagaccatggcagac
gtcaggaccctacccaacgcctccatactggataatatccgtgtggtgttcggcaataca
gtcagcagggagctgattgaagtgggctgtgaggatcagaagcttgcctataagctgaag
ggccacatctccaatgccaactactcagtgaagaagtgcattctcatcctcttcatcaat
catcgtctggttgaatcgagtgccttaaaaaaagccattgagaccgtttatgctgcatac
cttcccaagaactctcacccatttctatatctcagcctggagattgcccctcataacatc
gacgtgaatgtccaccctaccaaacacgaggtgcacttcctccacgaagactgtatcatc
gagagcgttcaaaaacagatagagagcaaactcctgggctccaactcctcacgcacgtac
ttcacacagacattgctgcctgggctgtctgtctccaccagcgaggggaagtcttcctcc
aactccacaggggacagtgaacgggtctacgcccatcagatggtcaggaccgacagtaga
gcccaaaagctggacgcctttctccagccggcgtccaagctggcccctcctcccaccgcc
aaccctaatgggcagagcaggggggaacctgtgaccaccaatgacatggaagagatggac
aacgccgagatcctggaggaacaggcgccaggtgccacagaggatggggagcgaaccagc
cgaaataccccagctgatctccccaggaagcgtccccgtgccggtcaggacgaggagcag
gaggacctgactgctgcagccacaaccaggagacgagccatcaagctgagcagtgtgaag
gagctgagagatgacatcgctgagtacgcacacaaaggtcttcaagagatgcttcagaat
cactcgtttgtgggctgtgtcaacccccagtggactctaatccagcaccataccaaactg
taccttctcaacaccaccaaactcagccaggagctattctaccaaattttgatctacgac
ttcggtaactttggcatcttgaggttatctgagcctgcgccactctatgacctggccatg
ctggctctggactccgaggagagcggctggtcggaggaggacgggcccaaggagggtctg
gcccaatacatagtcgacttcttgaagaagaaatctgagatgctggaggactacttctcc
atggagatcgaccaggaaggaaatctcaccggtttgccattgctgcttgacaagtacacc
cctcctatggagggtctgcccatgttcatcctacgtttggctactgaggtgaactgggac
aatgagaaggactgcttcagagaattcagcaaggagtgcagccagttctactctatcagg
aaacagtatgtcctggagccgggagaggaggagcaggatgcagagctgaactcgtggcgt
tggaaggtggagcatctcctgtttaaatccttccggagcctcttcagtccccctaaacac
ttcagtgaggatggcagcgtactccagattgctaatctaccagacctctacaaagtattt
gagcgatgctaa
DBGET
integrated database retrieval system
