Oncorhynchus kisutch (coho salmon): 109889765
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Entry
109889765 CDS
T09179
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109889765 (tial1)
03041 Spliceosome [BR:
oki03041
]
109889765 (tial1)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109889765 (tial1)
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109889765 (tial1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Nup35_RRM_2
RRM_Nup35
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
109889765
NCBI-ProteinID:
XP_020337050
Ensembl:
ENSOKIG00005002373
UniProt:
A0A8C7CRT4
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All DBs
Position
LG4:complement(59952838..59976294)
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AA seq
406 aa
AA seq
DB search
MEDESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQ
SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQT
FSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKESPDMAKS
VPQVEYGQGQWGQWNQMYGSPQAQQYGQQYMANGWQVPSYGVSYGQSWNQQGFGVEDSIL
AAAAQNISRQSQSPAWVGGFGSPAPSQPGPVMPNQGNFNMAGYQTQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaagccaccccaaaacgctgtatgttggtaacctgtccagagatgtaaca
gaaattttgattcttcagctgttcacccaaattggaccttgcaaaagttgtaaaatgatc
actgagcaacccgatagcaggaggatgaactcttctgtgggattttctgttttgcagcag
tcaagcaatgacccgtattgctttgtggagttctttgaacatagagatgctgctgctgcc
ctagcagccatgaatgggaggaagatattgggaaaggaggtcaaagtaaattgggccacc
actccaagtagccagaagaaagatacatcaaatcacttccatgtgtttgtgggagactta
agccctgagatcaccactgaggatatcaaagctgcatttgcaccttttgggaaaatatcg
gatgctcgtgttgtgaaggacatgacgacaggaaaatctaaggggtatggatttgtgtcc
ttctataacaaactggatgcagagaatgccatcgtgcacatggggggacagtggttagga
ggacggcagatcaggaccaactgggcaactcgcaagccacccgcccccaaaaatgtgcaa
gacaatggctcgaagcagctgaggtttgaagatgtagtgaaccaatccagtccccagaac
tgcaccgtgtattgtggaggaatccagtcaggactgtcagagcacctcatgcgacagaca
ttctcaccctttggacaaataatggaaatccgagttttcccagagaaaggttactctttc
atcaggttttcctcccatgaaagtgctgcccatgcaattgtctctgtaaatggaacgtcc
attgaatgccacatagtgaagtgctactggggcaaagaatcccccgacatggccaaaagc
gtaccacaggtagagtacggtcagggtcagtggggacagtggaaccaaatgtatgggagc
ccccaggcccagcagtatgggcaacagtacatggcaaatggttggcaagtgccttcttat
ggagtgtcttatggacagtcatggaatcagcaaggatttggtgtagaggattccattctg
gccgcagcagcacagaacatttcaagacagtcccagtccccagcctgggtgggagggttt
ggatccccggcgccgtcccagcccggtcctgtgatgcccaaccagggaaacttcaacatg
gctggctaccagacacagtga
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