Oncorhynchus kisutch (coho salmon): 109889889
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Entry
109889889 CDS
T09179
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109889889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109889889
Membrane trafficking [BR:
oki04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
109889889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
109889889
NCBI-ProteinID:
XP_020337262
Ensembl:
ENSOKIG00005009693
LinkDB
All DBs
Position
LG4:complement(67105320..67184729)
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AA seq
1894 aa
AA seq
DB search
MVDKNIYIVQGEIITVVSAIKRNSRWNTHTPLDEEQDPLLNSFSHLKETLNNIKELSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEVRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSFVGANMKKIPSCILDTQDLICAEQPINTNQRGLER
LKMRAGGMSESSKWKKQKRSPRPPHHMVRSASGGLEQAPPATLSHNNLTGGDLFIEQVSL
SVPDSMASSMSSPTDSGLDTCSKATSREDLTDLDQSSSVATTPGTATSPSTEPGRLDAQS
EGRQVDRAQSASVESIPEVLEDRDSVTEQSDSASIHDMDYVNPRGVRFTPQQTLRDGEDG
AALIPYGLPCLRELFRFLISLTNPHDRHNTDAMMHMGLQLLTVALEAAHIAPYQSLLGLV
KDELCRHLFQLLNVDRMNLCTASIRACFLLFESMRGHLKFQLEMYLKKLMDIITSENMKM
PYEMKEMALEALVQLWRIPSFVTELYINHDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTT
HLLSLEALLTVIDSTEAHCQAKVLNSTAQQDQSAETVLVEGEGSTNDHVDTTTEAGRQVN
VPEADSVPLPPTSGHLMAEKMRLGRQDQEETEPSAEKKEPTKPQRFSSCLPDSQELLDIR
NKKKLLNSGTEQFNQKPKKGIQFLQEKGLLSSPMDNNEVAQWLRENPRLDKKQIGEFISD
RKHMELLDSFVNTFTFQGLRIDEALRLYLEAFRLPGEAPVIHRLLETFTDTWHKVNGSPF
MTNDAGFALAYAVIMLNTDQHNNNVRKQNIPMTVEQFKKNLKGVNGNTDFDQDMLEDIYN
AIKNDEIVMPDEQSGLVKENYVWSVLLHRGATSEGVFLHVPAGSYDHDLFTMIWGPTIAA
LSYVFDKSLDDAIIQKAIAGFRKCAMISAHCGFSDVFDNLIISLCKFTTLSSESAENLPT
VFGSNGKAQVAAKTVFHLAHRHGDILREGWKNIMDSMLQLFRAELLPKAMVEVEDFVEPN
GKISLQREETPSNRGESAVLSFVNWLTLSGAEQSGLRGPSTENQEAKQAAMLCIKQCDPE
KLITESKFLQLESLQELMKALISVTPDEETYDEEDAAFCLEMLLRIVMENRDRVSCVWQT
VRDHLCHLCVQATESCFLVERAVVGLIRLAIRLLRREDISSQVLLSLRLLLMMKPHVLAR
VSREVAYGLHELLKTNAANIHCTDDWFTLFSLIECIGAGIKPPASFQVTSTSPDIDTGAQ
SDSELSSHHHSEVSLDRGYTSDSEVYTEHGKSRMPRSVTDVDVASSGWLVVGKDDLDINK
VPASGSKPLLNPLVNQYSLTLGQDMGFHDTKSLIKCVESLSFIVRDAAHVTPENFELCVK
AIRVFVEASLNGGYRTHEKKKNHKYDSQKSRVRRKPREKEGASRRAKASSQRPSRSHSDD
EEDEGVPASYHTVSLQVSQDLLDLMHTLHTRAASIYSSWAQEQRHLEVAGKKIEADSQTL
WTSCWCPLLQGIAWLCCDARRQVRMQALTYLQRALLVHDLQTLDAVEWESCFNKVLFPLL
TKLLDNISPADVGGMEETRMRACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHA
GSSDLLLEAIPESLKNMLLVMDTAGIFHSVDSRTGYSDLWEITWERINCFLPNLREELFK
QTVIPQPDPAPSPPVELAQLAAPSPPASPPPAQAPSPVPAAPTEPKTFSRPASPQDPPPP
SANGTDRSSPVPPSTPPMPTPVKMSPQISTPLSHSHMSQSPLILQPLASHLQVGGVPPMS
LPIILNPALIEASSPVPLLPAPRPTDLSDTPEVK
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacaagaatatatacattgtccaaggggagattattacagttgtaagtgccatc
aagaggaattcaaggtggaatacccacactcctttggatgaagaacaagatccattgctt
aacagcttcagccacctgaaggagactctcaacaatataaaagagctgtcagatgtggag
cctaacgtattcctgcggcccttcctggaggtggtacgatctgaagacaccaccggacca
attacaggcctggccctcacctctgtcaacaagttcctgtcctacggcctcatagatgct
aaccatgaggcggcagcggaggccattgagaacatggcagacgccgtcacacacgccaga
ttcgtagggacggaccccgccagcgatgaagtggtgctcatgaaaatcctacaggtcctg
aggaccttgctgctcacgcccgtcggagcccacctgaccaacgagtctgtgtgcgagatc
atgcagtcgtgtttccgcatctgcttcgaggtgcgcctcagtgagctcctgaggaaatca
gccgaacacacactggtagacatggtgcagctgctgttctccagactaccccaatttaaa
gaagaggccaaaagttttgtgggtgctaacatgaagaagatcccatcctgtatcctggac
acacaggatcttatttgtgcagaacagcctataaacaccaatcagaggggcttagagagg
ctgaagatgcgcgctggtgggatgagcgagtcatcaaagtggaagaagcagaaacgctcg
ccccggcccccccatcacatggtacgaagcgcctcgggcggattggagcaggcccctccc
gccacccttagccacaacaacctcactggtggtgaccttttcatcgagcaggttagtttg
tctgtcccagacagcatggcctcttccatgtctagccccacagacagcggtctggacacc
tgctccaaggccacctccagagaggacctgacagacctggaccagagcagctctgtcgcc
accaccccaggcacagcaacaagcccttccacagagcctggacgcctggatgctcagtct
gaggggaggcaggtggatcgtgcccagtcagcttcggtggagtccatccctgaagtcttg
gaggacagagactctgtgacggagcagtcagactcggcctcaatacacgacatggattac
gtcaacccccgaggagtccgcttcacaccacagcaaactctgagagatggtgaggatggt
gcggctctcatcccctacggtctgccctgtctgcgggagctcttccgcttcctcatctcg
ctgaccaacccccatgaccgccacaacacggatgccatgatgcacatgggcctgcagctg
ctgaccgtggctctggaagctgcccacattgccccctaccagtcactgctgggtctggtc
aaagacgagctctgcagacacctcttccagttgctaaatgtggaccgtatgaacctgtgt
accgcctccatacgagcctgcttcttgctctttgagagcatgcgaggacatttgaagttt
cagcttgagatgtatctgaagaagctgatggacatcatcacgtcagagaacatgaagatg
ccttatgagatgaaggagatggccctggaggccctggtgcagctctggaggatccccagc
ttcgtcactgagctctacatcaaccacgactgtgacttctactgctcaaacctgtttgaa
gacctcaccaagctgctctccaagaatgcctttcctgtgtccggacagctctacacaact
caccttctctcactagaggccctactgactgttattgacagcaccgaggcccactgccag
gctaaggtgctcaacagcacagctcagcaggaccaatcagcagaaactgtgttggtggaa
ggggagggctcaaccaatgaccatgtagacacaaccacagaagcaggcaggcaggtgaac
gttccagaggctgacagcgtgccccttccacctaccagcgggcacctaatggcagagaag
atgagactgggcagacaagaccaggaggagacagaaccatctgctgagaagaaagaaccg
acaaagcctcaacgcttctcgtcttgtttacctgattctcaagagctgttggacatcaga
aataaaaagaagctgctgaacagcggcacagagcagttcaaccagaagcctaagaaaggc
atccagttcctgcaggagaagggtctcctcagcagccccatggacaacaacgaggtggcc
cagtggctccgggagaacccccgcctcgacaagaagcagatcggagagttcatcagtgac
cgcaagcacatggagctactggacagcttcgtcaacacgttcactttccaaggactgcgt
attgacgaggcgctgcgtctgtatctggaggccttcagactgccaggagaggctccggtc
atccatcgacttttggaaaccttcacagacacctggcataaagtgaacggttctcccttc
atgaccaatgacgcgggtttcgccctggcctacgctgtcatcatgctcaacacggaccag
cacaacaacaacgtgcgcaagcagaacatccccatgactgttgagcaattcaagaagaat
ctgaagggtgtgaatggaaatacagacttcgatcaggatatgctggaggacatctacaat
gcaatcaagaatgacgagatagtgatgccagacgagcagtcaggcctggtgaaagagaat
tacgtgtggagcgtgctgctccaccggggggccacctccgagggggtctttctccacgtg
cctgccggcagctacgaccacgacctgttcaccatgatctgggggcccaccatcgccgcc
ctctcctacgtcttcgacaagagcctggatgacgccatcatccagaaggccatcgctggc
ttccggaaatgtgccatgatatcagctcattgtggattcagtgacgtgtttgataatttg
atcatctccctctgcaagtttacaacgctcagcagcgagtcggcggagaaccttcccaca
gtgtttgggagtaacggtaaggcccaggtagccgctaagaccgtgttccacctggcccac
cggcacggtgatatcctgagggagggctggaagaacatcatggactccatgctgcagctg
ttcagagccgagctgctgcccaaggccatggtggaggtggaggattttgtggagccaaat
ggaaagatttcgcttcaaagagaagagacaccttcaaatcggggcgagtctgcggtgctg
agctttgtgaactggctgactctgagtggagcggagcagtctggtcttcgtgggccctct
actgagaaccaggaggccaagcaggcagcaatgctctgtatcaagcaatgtgacccagag
aagctgatcacagagagtaaattcctgcagctggagtctctacaggagctgatgaaggct
ctgatctcagtcacacctgacgaggagacgtatgatgaggaggacgcggctttctgcctg
gagatgctgctacgcatcgtcatggagaacagggaccgcgtgtcatgtgtatggcagacg
gtgcgggaccacctgtgccacttgtgtgtccaggctacagagagctgtttcctggtggag
agggctgtggtgggcctcatcagactggccatccgcctgctgcgcagagaggacatcagc
tcacaggtgctgctgtccctgcgtctcctgctgatgatgaaaccacacgtcctggcccgg
gttagccgggaggtggcctacggcctccatgagctgctcaagaccaacgctgccaacatc
cactgcacagatgactggttcaccctcttctccctaatcgagtgcatcggggccgggatc
aaaccacccgcctccttccaggtcacctccaccagtcccgacatcgacacaggtgcccag
tcggacagtgagctgtcatcccaccaccacagcgaggtgagtctggaccggggctacacc
tctgactctgaggtctacacggagcacggaaagtccaggatgccccgctctgtcactgat
gtggacgtggccagcagcggatggctggtggttggtaaagatgacctggacatcaacaag
gtaccggcctctggctccaagcccctgctcaaccctctagtgaaccagtacagcctgacc
ctgggccaagacatgggcttccacgacaccaagtccctcatcaagtgtgtggagtccctc
tccttcatagtacgcgatgctgcacatgtcacccctgaaaactttgagctgtgtgtcaag
gccatccgggtgtttgtggaggccagccttaacggaggctacaggacccatgagaagaag
aagaaccacaagtacgactcccagaagtcccgtgtgaggaggaagcctcgggagaaagag
ggggcatcccgccgcgccaaggcctccagccagaggccctcccgttcccatagtgacgac
gaggaggacgagggagtcccggccagctaccacacggtgtcattacaggttagtcaggac
ctgttagacctgatgcacaccctgcacacgagggccgccagcatctacagctcctgggca
caggaacagcgccacctggaggtcgcagggaagaaaattgaggctgactcccagacactg
tggaccagctgctggtgcccacttctccaagggatagcctggctgtgctgtgatgccagg
cggcaggtgcgaatgcaggccctgacctacctccagagggcactattggtccatgacctg
cagacactagatgctgtggagtgggagtcctgcttcaacaaggtcctgttccccctgctg
accaagctgctggacaatattagccctgcagatgtgggaggcatggaggagaccaggatg
agggcctgcaccctgctgtcaaaggtgttcctgcagcacctctctcccctgttgtctctg
cccaccttcgctgccctgtggctcaccatcctggacttcatggacaagtacatgcacgct
ggctccagtgacctactgctggaagccattccagagtctctgaagaacatgctgctggtg
atggacacagcaggaatcttccacagcgttgactcccgtacgggatactctgacctgtgg
gagatcacctgggaacgcatcaactgcttcctgcctaacctccgggaagagctcttcaaa
cagacagtcataccccaaccagatcctgctcccagtcccccagtggaacttgcccagctg
gctgccccctcccccccagcctcgccacccccagcccaggccccatctccagtgccagct
gcccccacagagccaaagaccttcagcagaccagcgtcgccccaagatcccccaccacct
agtgccaacggaactgacagatcatctccagtgcccccgtcgactccccccatgcctacc
ccagtgaagatgtccccccagatctctacccccctgagtcattcccacatgagtcagtcc
cccctcatcctgcagcccctggcctcccatctgcaggtggggggcgtgccccccatgtcc
ctgcccatcatcctcaaccccgccctcattgaggccagctcccctgtccccctgctccct
gcccccaggcccaccgaccttagtgacaccccggaggtaaaatag
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