Oncorhynchus kisutch (coho salmon): 109889917
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Entry
109889917 CDS
T09179
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109889917 (zswim8)
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
109889917 (zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
109889917
NCBI-ProteinID:
XP_020337322
Ensembl:
ENSOKIG00005029771
UniProt:
A0A8C7J0P8
LinkDB
All DBs
Position
LG4:68477301..68512413
Genome browser
AA seq
1975 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRMRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMLKRRDSNAAPLLE
ILTEQCLTYEQIIGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTMSPHRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAY
PLPGITYCSADKKSASFCWARAVQQQRGAKAGLAGDPPEPGGGRSGSSEGGGGDYKGRSP
QQEVAVRPKETIVSKRKGLSAGGGGGVLVRLGGSVSLSLEEGSSKGMYKGAGSSSSTGSK
AKIAQGGKLSSGGSGVVGGKHQAAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEASNTF
DFTPPPPEMLPSPSPLLREPHKYSGGGKGAGNTPKERAFEGKRATLAATLPATESQPAFP
TKENAAVIVEAAIAVVNVEAEMNGNEEAAIAGDARPSTSVVTVTAAAAKSPHDGRRETGT
GAVALPNQAPEGVAGAGGDPVGEDDYQAYFLNSANEEGAERVSENNNEEEPDIFAGIKPL
EQEGQMEVLFACAEALHAHGYSNDACRLAVELAGDLLANPPDLKVEQPQTKGKKSKVSTS
RQTQVATNTLVKTSFLLTVLSERLELHNLAFSTGMFSLELQRPPASTKALEVKLAYQESE
VVALLKKIPLGLVEMTSIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSR
PPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKD
DQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPAASSQRSPSKHTAHTAHGHGGATGGVS
KHAPNATAAAGSSSSSLQAVAAGGASGQQAGLEGSGVQNNSTAGECVSEAREQADGVQPA
SCDQPSEAVPFKPEGTVPSRLALGGRGAYSGRCWGSPVRQKKKHTGMASIDSSAPETTSD
SSPTLSRRPLRGGWAAASWGRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSR
YKGRRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGGHQGPHRN
LHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTP
PEVASLADRASRARDPNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQVHVRYSSVL
QKTHRTTHDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGGSGAQREGP
GRCGANGGAGRRPPEMGHGVMDNIGNMDSSGVATVTASVTAAAVVPVISVGSTIYQSHAL
PGSAMAHPHTQGLHPYTTIQAHLPTVCTPQYLGHPLQHVPRPTVFPVSGSAYPQCVCVPS
QGMHPAFIGAQYPFSVATGPHPPMAATAVTFPGVPVPSMTQIAVHPYHTETGLPLSTTVA
GAASFSPFYPVGGVHSGATIQAIQGSSLPGMSSQPVSLVSAPFPSEDEQHSQPISQQGLH
YLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVYQFCVGA
AKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPA
DYDDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggaactaatgttcgccgagtgggaagacggagagaggttctccttcgaagattctgac
cggttcgaggaggactcgctctgctccttcatatcagaggctgagagtctgtgtcagaac
tggaggggatggagaaaacagtctgctggaccaaattctcctacagtgaagattaaagat
ggtcaggtcatccctctggtggagctatcagccaagcaggttgcattccacatcccgttt
gaggtggtggagaaggtctaccctcctgtccccgagcagctgcagctccgcatcgcctac
tggagcttcccagagaatgaggaggacatccggctgtactcgtgtctggctaacggcagc
cctgatgagttccagcgaggggagcagctgtacaggatgagggctgtcaaagaccctctg
cagataggtttccacctcagtgccaccgtggtgtcgccccaggctggccaatcaaaaggg
gcgtacaatgtggctgtcatgttcgaccgctgccgcatcacttcctgcagttgcacctgt
ggagccggggccaagtggtgcgcccatgtggtggccctctgcctcttcaggatccacaac
gcatctgcagtgtgcttgcgagcccccgtgtcagagtccctgtcccggctgcagagggac
cagctgcagaagtttgcccagtacctcatcagtgagcttccccaacagattttgcccaca
gcccagaggcttctggatgagctcctgtcctcccagtccacagcaatcaacacagtgtgt
ggggctcctgaccccactgctggcccctcagcctctgatcagagcacctggtatctagat
gagtctacgctcagtgacaacatcaagaagactctgcacaagttctgtggcccctctcct
gttgtcttcagtgacgtcaactccatgtacctgtcatccacggagcctccggcggcggca
gagtgggcatgtctgctgaggccgctgagggggcgggagcccgaggggatctggaacctc
ctttccatcgtcagggagatgctcaagaggagagacagcaacgctgcacccctactagag
atcctcactgagcagtgtctcacttatgaacagatcattggctggtggtacagcgtgcgt
acttcggcatcccacagcagtgccagcgggcacacggggcgcagtaacgggcagtcggag
gtggcagcccacgcctgcgccagtatgtgtgatgagatggtcgttctgtggaggctggct
gtcctagaccccaccatgagccctcataggcgtttggagctggctgcccagctcaagcag
tggcatctgaaagtgattgagattgtgaagcgaggacaacaccgcaagtccctggacaaa
ctgttccagggcttcaagccagccgtggagtcctgctacttcaactgggaggtggcctac
ccactgccaggcatcacctactgcagtgcagacaagaagagcgcttccttctgctgggcc
agggcagtgcagcagcagagaggggccaaggctggcctggctggagacccccctgaacct
ggaggagggagatctggcagctctgagggaggtgggggagactataagggcagaagtccc
caacaagaagtggcggtcaggcccaaagagaccatcgtgagcaagaggaaggggttgtcg
gctgggggcggaggaggggtcctagtgcggctagggggcagtgtgtctctctctctagag
gagggcagtagtaagggtatgtacaaaggcgcaggttcctcctcgtccactgggagcaag
gctaagatagcccaggggggcaagttgtcctctgggggatcaggagtggtagggggaaaa
caccaagcggccaagcggcgcaccagcagtgaggacagctccctcgagcctgacatggcc
gagctgagcctggatgatggctccagtctggcactgggtgctgaggccagcaacaccttt
gacttcacgcccccgccgcctgagatgctgccctcaccaagcccgctactcagagagcca
cacaaatacagtgggggagggaaaggggccggaaacacgcccaaggagcgtgccttcgag
ggcaaacgggccacccttgctgccaccctgcctgccactgaatcccagcccgccttcccc
accaaagagaacgctgctgtcatcgtggaagcagccattgccgtggtgaatgtggaggcg
gagatgaatggaaatgaggaggcggccatcgctggagatgctcggccctctacctcggtt
gttaccgtgactgcagctgccgccaagtcaccgcatgatggccgccgagaaactggcact
ggagccgtagcactgcccaatcaggccccagagggagtagcaggggcaggaggagaccct
gtaggagaggatgactaccaggcctactttctgaattcagctaatgaggagggggcagag
agagtgtcagagaacaacaatgaggaggaaccagacatctttgctgggatcaagccactg
gagcaggagggccagatggaggtgctgtttgcgtgtgcagaggccctccacgctcacggc
tacagcaacgatgcctgcagactggcagtggagctggccggagacctgctggccaaccct
ccagacctgaaggtggagcagccccagaccaagggcaagaagagcaaggtgtccaccagc
aggcagacccaggtggccactaacacgttggttaagacctccttcctgctgacggtgctg
agcgagaggctggagctccacaacctggccttcagcacgggtatgttctctcttgagctg
cagaggcccccagcttccaccaaggccctggaggtcaagcttgcttaccaggagtcagag
gtggtggctctgctgaagaaaatccctctgggcctggtggagatgacgtccatacgggac
agggccgagcagctccgagatgggaacttctgtgactacaggcctgtcctgcccctcatg
ctggccagcttcatatttgatgtgctgtgtaccccagttgtgtcccccacaggttcccgt
ccgcctagccgtaaccggaacaacgagatgcctggagatgaggagctgggctttgaggcg
gctgtagcagcactgggtatgaagaccacagtgagcgaggcagagcatcctctgctgtgt
gaggggaccaggagagagaaaggagacttggctctggccctcatgatcacatacaaggat
gaccagagcaagctgaaaaagatcctggacaagctgctggacagagagagccagacccac
aagccccagaccctaagctctttctactccagcaagccagctgccagcagccaaaggagc
ccgtccaagcacactgcccacactgctcacggacatggaggtgccacaggaggggtgtcc
aaacatgcccccaacgccacagctgcagccgggtcctcctcctcctccttgcaagcggtg
gctgctgggggggcgtcaggacagcaggcaggtctggagggcagtggggtgcagaacaac
tccacagccggagagtgtgtcagtgaggccagagagcaagcagatggcgtccagcctgcg
tcatgtgaccagccgagtgaggctgtcccattcaagccagagggcacagtgccgagccgc
ttggcgctgggaggacggggggcatacagcgggcgctgctggggatctcctgtccgccag
aagaagaaacacacaggcatggcgagtatcgacagcagtgctcctgagaccacctcagac
agctcccccacccttagtcgacgcccgcttagagggggctgggctgcagcttcctggggg
aggggccaagacagtgacagcatcagcagctcctcttctgattcgttaggctcctcctca
tccagtggctctcgcagggccggaggcggagctagggcaaagagcacagacaccagcaga
tataaagggcgtcgtcccgagtgtcatgcaccacatgtgcccaaccaaccgtcggaggcg
gcggcccacttctatttcgagctggccaagaccgtgctgatcaaggccgggggcaacagc
tccacctccatcttcacccagccctcagccagtggaggccaccaggggccccaccgcaat
ttgcacctctgtgcctttgagatcggcctgtacgccctaggcctgcacaactttgtctca
cctaactggctctccaggacctactcctcccacgtctcctggatcacaggccaggccatg
gagatcggcagtgctgcccttaacatcctggtggaatgctgggacgggcacctcacccct
cccgaggtggcatcactggccgacagagcatcacgggcgcgggaccccaacatggttcgc
gctgcggctgagctggccctaagctgcctgccccatgcacacgccctcaaccccaatgag
atccagagggccctggtgcagtgcaaggaacaggtacatgtccggtactcttcagttctg
cagaagacacatcggactactcatgacaacgttatgctagagaaagcctgtatggctgta
gaggaggcagccaaggggggtggtgtgtaccctgaggttctgtttgaggtggcccaccag
tggtactggctctatgagcagacagtaggcggggggtcaggggcccagcgcgaaggcccg
ggacgctgtggggccaacggtggagccggaaggaggcccccagagatgggccatggtgta
atggacaacattggcaacatggattcctccggtgtcgccacggtgactgcctcagtgaca
gcagcggctgtggtacccgtcatctctgtgggctccaccatctaccaatcacacgccctt
cctggctcggccatggcccacccccacacccagggcctgcacccctacaccaccatccag
gctcacctacccacagtctgcaccccccaatacctggggcacccactgcagcacgtcccc
cggcccactgtattccccgtgtcagggagtgcctacccacagtgtgtctgtgtgccctct
cagggaatgcacccggcctttatcggtgcccagtacccgttctcagtggccactggcccc
catccgcccatggcagcgacagcggtcaccttccctggtgttcccgtgccgtccatgacc
cagatcgccgtccacccctatcacaccgagaccggcctgcctcttagcaccactgtagca
ggagccgcatctttttcccctttctatccagtaggtggcgtccattcaggcgccacaatc
caggccattcaggggtcctctcttcctggaatgtcttctcagcctgtctcattggtcagc
gccccattcccgtctgaagacgagcagcatagccagccaatcagccagcagggccttcac
tacctgcactcagcatacagagttggcatgctagcattggagatgctgggtaggagggct
cacaacgaccaccccaataacttctcccgcagccccccatacacagaggacgtcaagtgg
ctcctgggcctggctgcacggctaggggtgaactacgtgtaccagttctgtgtgggtgcg
gctaagggcgtgctcagcccctttgtccttcaggagatcatcatggaggctctccagaga
ctgaaccccgcccacatccatgcccacctccgcacgcctgccttccaccaactggtgcag
cgctgccagcaggcctacctacagtacatccaccaccggctgatccacctgaccccggcc
gactacgatgactttgtcaacatcatccgcagcgcccgtggggctttctgcctgacacct
gtgggcatgatgcagttcaacgacgtgctgcaaaacctgaagaggggcaagcagaccaag
gagctgtggcagcgcatctctctggagatggccaccttctccccatga
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