Oncorhynchus kisutch (coho salmon): 109889959
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Entry
109889959 CDS
T09179
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109889959
Membrane trafficking [BR:
oki04131
]
Endocytosis
Others
Others
109889959
Endosome - Lysosome transport
109889959
Endosome - Golgi transport
109889959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
109889959
NCBI-ProteinID:
XP_020337411
Ensembl:
ENSOKIG00005048544
LinkDB
All DBs
Position
LG4:72078093..72131850
Genome browser
AA seq
1247 aa
AA seq
DB search
MVVSGSVWCCALLTCILISFYNMLTAYAEISWPASSTTTNVWFNRMDKLPLELRANLKSA
WVKVPKYIDKESTFSRDFRMETIDGKAVGPKGEEKLPKDLDGVIGKVPPDAVSTVRDKKA
PNRSKHFTADSKRSVSSFEVKDGTFASSNRMRTKRSTSFGEYSDRSQIGGPGDAFSAEKL
VEPLQGVYSSRTEYRRTGEDARTSPRQSEPLLVTSTFPLSGDSAHNQAMGHWVGENSSVI
LTLTKQYDFNLGAFTESSLWRSVDYGSTYIKLNKKVGSTLACLYVCPTNKRKIMMLSDPE
LEQSVLISSDEGASFEKYPINFYMDGLLFHPTQENWLLASSPDNKVYSTMDFGRKWQLVS
ENVTPGRFFWAQTGLDREADVVHMETHIAKGRAQYVKCRAQRCTESNRQYLFPGYIDKNS
LVVQDNYVFVQVTKSGQASYFVSYMRESFKRIQLPKYCLPKDMHIISTNEKQVFSAVQEW
NQNDTYSLYISDSPGVYFTLSLENLRTRREPGGNVLVDLYKVEGINGIFLANKLVGHEVK
TFITYNKGQTWALLQAPNTDVAGNSLHCILPFCSLHLHLDTPVNPYLPGRIFSMDSAPGI
IVATGNIGTELSSTNLGMFITSDAGNSWRQIFEEELGVWFLDNGGALVAVSLVATVPIRH
VWVSLDEGKKWDRHSFSLAPLFLDGVLMQPENHIITFTGHLSRVSEWQLIKIDYKAIFSR
RCMDGDYQTWHLHNKGEPCVMGEKQTFMKRRPGNRCMLAQDYSRVISSEPCICRTYDFEC
DYGYERQADGKCTPAFWFNPSTVTRSCSTSHNYLNSTGYRKVLSNNCKEGGKDVYSPRKQ
HCSPRPPRGLRLTTSQGELTATVGSNVTFLVYLDDGNSLWTYIQLDFGDGITFMYNLSRR
GDGIKHSYREDGIFRVTAHAENSQGYDISSLFLHITSPVERVYLSAPIVAIRKKEANLTA
VVWPVHHRTLTFFWWFENSSEPLITLDGSISYTFWKEGMNRIMVQVSSGCNILQDTKVII
VKDFFKSLLLSFSPALDEHNPDIPEWREDVGRVVRTAVSQVSGFPEERLLVSLFPGVPTT
AELFILPETQLPEHGKRNKEDLVSISNLVINALNHGLVQFELKADTQIIVYITQLTLAPL
VYSNPIHSSSVMLMLLSVVFVGLAAFFIFKLKRKIPWIHVQAEENQEKEPEMIGTVGQNN
TMSKMKLSEFTTEKELMEKELKTRSRGEYGRNGERVITREFPTCTNV
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtctcggggtcagtttggtgttgtgctcttttgacttgcattttaatctctttt
tacaatatgttgacggcatacgctgaaataagttggccagcgagttccacgacgacgaac
gtttggtttaaccgtatggataaattgcctctggagctgcgcgcaaacctaaaatccgca
tgggtcaaagtcccaaagtatatcgacaaggaatccacattttccagagattttagaatg
gaaacaattgatggaaaagccgtaggtccaaaaggtgaggagaaattgccaaaggacttg
gacggagttattgggaaagtgccaccagacgctgtatctactgtcagagataaaaaggcg
ccaaaccgttccaagcattttactgctgacagcaaaaggtctgtcagttcctttgaagtt
aaagacggtacatttgcttcaagtaaccgtatgaggacaaagcgaagcacatcatttggc
gaatattcggacaggagtcaaattggaggtcctggtgacgcattttcagccgagaagctt
gtggagcctttacaaggcgtttacagttcgaggacagaataccgacgaactggggaggac
gcaagaactagcccgaggcaaagtgagccgcttctggttacctccactttccctctgtcc
ggagactctgcgcacaaccaggcaatggggcactgggttggagaaaacagcagcgtgatc
ctgaccttgacgaagcagtatgactttaacttgggtgctttcactgagagttctctgtgg
agatcagtggactatgggagcacttatataaaactgaataaaaaggttgggtcaaccttg
gcttgcctatacgtctgcccaaccaacaagagaaagataatgatgcttagcgacccagag
ctggagcaaagtgtactcatcagctcagatgaaggtgccagcttcgagaagtatcccatt
aacttctacatggacggtctgctgtttcatccaactcaggaaaactggctactggctagc
agtcctgacaacaaggtgtacagcacaatggattttggaagaaaatggcagttggttagt
gagaatgtaactcctggccggttcttctgggcacaaactgggctagacagagaggcagat
gtggtccacatggagacccacatcgccaaaggacgtgctcagtatgttaagtgcagagct
caacgatgcacagaatcaaacagacaatacctgttcccgggatacatagacaaaaattct
ctggttgttcaggacaactatgtgtttgttcaggttaccaagtcagggcaggcgagttac
tttgtgtcctatatgagggaatcatttaagcgaattcagctacccaaatactgtcttcct
aaggacatgcacatcatcagtacaaatgagaagcaggtgttttctgctgtacaggagtgg
aaccagaatgacacctacagcctgtatatctcagactctccaggggtatacttcactctg
tctctagagaacctccggaccagaagagagccaggcggaaatgtactggtcgacctgtat
aaggtagaaggaataaatggcatatttctagccaacaaattggtgggccatgaagtgaag
acattcatcacctataacaagggtcagacctgggccctgctgcaagcccccaacactgat
gtggctggaaacagtctgcactgcatcctgccattttgttctctgcatctgcacctggat
acgccagtgaacccttacctacctggacgcatctttagcatggactcagcacctgggatc
attgtagctacaggcaacattggtacagagctgtcctccactaaccttggaatgtttata
acatctgatgctggaaatagctggagacagatttttgaagaagaactcggtgtttggttt
cttgacaatggaggtgctttagttgcagtttctttagttgcaacagtacccatccggcat
gtatgggtaagtctggatgagggtaagaaatgggatcgccacagtttctctctggctcct
ttgtttctggatggagttctcatgcagccagagaatcacatcatcactttcactggacac
ttaagccgtgtttcagaatggcagctgataaagattgactacaaagccatctttagcagg
agatgcatggatggagattatcagacttggcacctacataacaagggagagccatgtgtg
atgggagagaagcagacctttatgaaacggaggccgggtaaccgctgtatgctggcccag
gactactcccgagtcatatcctcagaaccatgcatctgcaggacatatgattttgaatgt
gattatgggtatgaacgtcaagccgatggaaagtgtacccctgctttttggttcaaccca
agcactgtgacaagaagctgtagcactagccataactacctcaacagcacagggtacaga
aaggttttgtccaataattgcaaagagggagggaaggatgtgtactcccccaggaaacag
cattgttcccccaggcctcccagaggcctcagactgactaccagccagggagagctcacc
gccaccgtgggcagtaatgtcaccttcctggtgtatctggacgatggaaactcgctgtgg
acttatatccagctagactttggggacggcatcactttcatgtacaacctgagccggaga
ggcgatggaatcaaacacagctatagagaagatgggatcttcagagtgacagcacatgca
gagaacagccagggttatgacattagctccctgttcctacacatcaccagcccagtggag
cgtgtgtatctctcagctcctattgttgccatccggaagaaagaagctaacctaacggct
gtggtctggcctgtccaccacagaacactcaccttcttctggtggtttgaaaacagctcc
gagcccttaataaccttggatggaagcatctcgtacacattttggaaggagggcatgaac
aggatcatggtccaagtgtcttctgggtgcaacatactgcaggataccaaggtcatcatt
gtcaaagatttcttcaaatccctgctgttatcgttctctccggctttggacgagcacaac
cctgacatcccggagtggagagaggacgtgggccgcgtggtgaggacagctgtatcacag
gtttctggatttccagaggaacggctgttagtatcgttgtttccaggtgttccaacaaca
gcagaactatttatcctgcctgagacacagttgcctgaacatgggaagcggaacaaagag
gacttagtgagtatatcaaaccttgttataaatgccctgaaccacggattggtccagttt
gagttgaaagctgacactcaaataattgtttacatcacacagctaactttggcacctctg
gtttactccaaccctattcacagtagctcagtcatgctgatgttgctgtctgtggtgttt
gttggtttagctgcgttttttatcttcaagttgaaaaggaaaatcccttggatccatgtc
caggctgaggagaaccaggaaaaggagccggagatgattggcacggtcgggcagaacaat
accatgtccaagatgaagctcagtgagttcaccacagagaaggaactcatggagaaagaa
ctgaagaccaggagcagaggagaatatggaagaaatggggagagagtgatcacaagagaa
tttcctacttgtactaatgtctaa
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