Oncorhynchus kisutch (coho salmon): 109889999
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Entry
109889999 CDS
T09179
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109889999
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109889999
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
109889999
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
109889999
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
109889999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_5
TIP49
Vps4_C
Mg_chelatase
AAA_14
DUF815
AAA_16
IstB_IS21
SAGA-Tad1
nSTAND3
AAA_24
RNA_helicase
NPHP3_N
MIT
AAA_2
Motif
Other DBs
NCBI-GeneID:
109889999
NCBI-ProteinID:
XP_020337530
Ensembl:
ENSOKIG00005026865
UniProt:
A0A8C7I5G2
LinkDB
All DBs
Position
LG1:61168664..61200920
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AA seq
596 aa
AA seq
DB search
MSSPGGRGSRKKRGPAGSPPDGGATCDQVSLHKRNLYYFSYPLLALFAVLRVLVLHFGEL
FAWLCERMSRAMAARPKQRAADEHANKVCEQDIGEQIRNHHKQAFEYISVALRIDEDDKV
HKEQAVQWYKRGIAELERGIAIEVAENGEKYERDKRLQAKMITNLIMAKDRLELLEKLRS
GPAQRDIYAESSNQSYHNGYLRSVSGAVPKKRDSLTTHSSHSLPRPKHTPKKTLPAGHGG
LQRSPSFIGPSSSHTQHRLVPQSNKNKSKTGNRQNCKPTTTPTSMSPLKKRDMKNLKNVD
SKLANLILSEIIDSGSSVRFEDVAGQELAKQALQEIVILPALRPELFTGLRAPARGLLLF
GPPGNGKTMLAKAVAMESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFID
EIDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLRRFA
KRVYVALPTEDTRLKLVKNLLGKHGNPLTQKELSQLARMTEGYSGSDLTSLAKDASLGPI
RELRPEQVRNMAANEVRNIRFSDFVESLKKIKKSVGPQTLDLYVRWNKDYGDTTGA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgggaggaagaggcagcagaaagaagcgaggccctgcagggtccccgccc
gacggaggggccacctgcgaccaggtgtcactacataaacgaaatttgtattacttctca
tacccactgctggcgttgtttgcagtgctccgtgtcctcgtattgcattttggcgaactc
ttcgcctggctgtgcgagcggatgtctcgtgctatggctgcgagacccaaacaacgggca
gcagacgagcatgcgaacaaggtgtgcgagcaggacatcggcgagcagatccgaaaccac
cacaaacaagcattcgagtacatctcagtggctctgagaattgacgaggatgacaaagtg
cacaaggaacaggcagtccagtggtacaaacgcggaatcgcagagctcgagaggggcatc
gcgatcgaggtagctgaaaacggcgagaaatatgaacgtgataaacgtctacaggccaag
atgatcactaatctgatcatggcaaaggatcgcctggagcttttagaaaagctgcgttca
gggccagctcagagagacatctatgcagagagctcaaaccagtcataccataacggttat
ctacgctcagtaagtggagccgtacccaaaaagagggactccctgactactcactccagt
cactccctcccacgaccaaagcatacgcccaaaaaaaccttgccggcaggtcacgggggc
ctccagcgctcccccagcttcattgggccctccagcagtcacacacagcacagactggtc
ccccagtccaacaaaaacaagagtaaaacgggcaaccggcaaaactgtaaacccaccacc
actcccacatccatgtccccactgaagaagagggatatgaagaacttgaagaatgtggac
agcaagcttgccaacctcatcctcagcgagatcatagacagtggctcatctgtgaggttt
gaggacgttgctggccaggagctggctaagcaggcactacaggaaatagtcatcctgcct
gcactaagaccagagttgtttacaggcttgagggctccagcacgaggccttctgctcttc
ggtcctcctggcaacggaaagacgatgctggctaaagcagtggccatggagtccaacgcc
acattcttcaacataagtgcagccagcttgacctcgaaatatgtgggggagggagagaag
ctggtgcgagctctgtttgccgtcgccagagaactgcaaccctcgatcatcttcatagat
gagatcgacagtctactctgtgaaaggagagagggagagcatgatgccagcagacgactg
aagacagagttcttgattgaatttgatggggtgcaatctggtggggatgaacgggtgttg
gtgatgggagccaccaacaggcctcaggagctggacgaggctgttcttaggcgatttgca
aaacgggtgtatgtggctttaccaacagaagacacccggctaaaactggtcaagaacctt
ttagggaagcacgggaatcctctcacacagaaagaactgtcccagcttgccagaatgaca
gaaggctactctggcagtgacctgacctcgctggccaaagatgcgtccctcggtcccatc
cgagagttgcgtccagaacaagtcaggaacatggccgcaaacgaggtgaggaatatcagg
ttctctgatttcgtggagtcactgaagaagatcaaaaagagtgtcggaccacagacgctg
gacctgtatgtgcgctggaacaaggactatggggacaccacgggtgcatga
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