Oncorhynchus kisutch (coho salmon): 109890019 Help Entry 109890019         CDS       T09179                                  Symbol ccdc88a Name (RefSeq) girdin isoform X1   KO K25392   girdin Organism oki  Oncorhynchus kisutch (coho salmon) Brite KEGG Orthology (KO) [BR:oki00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:oki03037]     109890019 (ccdc88a) Cilium and associated proteins [BR:oki03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    109890019 (ccdc88a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HOOK_N GAS DUF4472 KASH_CCD Motif Other DBs NCBI-GeneID:  109890019 NCBI-ProteinID:  XP_031679538 Ensembl:  ENSOKIG00005048802 LinkDB All DBs Position LG4:77325883..77404833 Genome browser AA seq 2044 aa AA seqDB search MGSEVFTPLLEQFLLTPLVAWVKAAGHSSGNDGTKLSEYIELVDGIYLNEIMLEINPKAT VQRTNKKVNNDSTLRIQNLSILIRQIKSYYQEILQQLVMMPLPNVLVLGRNPLSEQGLEE MRKLLLLLLGCAVQCEKKEEYIERIQTLDFDTKAAIASHIQEVTHNQENVVDLQWLDGGE LPPEDLDSFSRNMAFHLKRIVDERDDQLETIVELTQERDCGLYSPQPFCAQSPNDSPSMR RTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDCRQELDNMETENKRVQQESLQLLSD ARSARAYRDELDALREKAVRVDKLESEVGRYKERLYDIEFYKARVEELKEDNQVLLETKA MLEDQLEGTRARSDKLHELEKESLQLKSKIHDMEMDRDMDRKRIEELLEENLVLEMAQKQ SMDESLHLGWELQQLSMTPDLTEVPQKSLGHEVNELTSSRLLKLEKENQTLLKTVEELRG SASKHVPARLLKADKENQRLTQRLVQLESELNTERESLHSAEHLGTDLMKEKALLEKTLE TLRENSERQVKGLEQENEHLTNTVSSLRQRSQVGPEARVKDVEKENRVLHESIRETSSKL NKLEFERKQLRKDLAVYKEKGERTEELEVEAQRLERENEALQKRVASLGITCDKVASLEK ENAELEAEGRRLKKNVEGLRSTSFQLEALEKENAQLDEENLKLRRAAEVLRSAGNKAAQL ELENRELESERSQLKRSLELLKASSRKTERLEVSYQGLDTENQRLQKSLENSSRKIQQLE GELQDVEQENQSLQRSLEELKISSKRLEQLEQENKTLEQESSQLEKDKKQLEKENKRLRQ QAEIRDSKLDEDNLRISHLEKENRSLGKEMTSFKDSCNRLKDLEKENKELVKQATIDKKT LVTLREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLQAEQSSDDDRYKLLEFKLES TLKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEEERMVQSSPP RGGDREDSQAVNKWEKESHETTRELLKVKDRLIEVERNNATLQAEKQALHTNLKQLETQS SNLQAQILALQRQTASLQENNTTLQTQNAKLQVENSTLNSQSGALMAQNAQLATQQSSTE NEKEGAMRDREDLRSTYEMLLRDHEKLAALHERQASEYEGLIGKHGGLKSSHKSLESQHR DLEDRYNQLLRQKDQLEELEKQLKSEQEKMLSENKSHEATAADYHKLKEENERLNMAHRQ LVKDNEGLQADHKNLKSQMNGAKLEQTRMEAEFSKLKEQYQQLDITSTKLTNQCELLSQL KGNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEK IMDQYKFYDPSPPRRRGNWITLKMKKLIKPRSRERMRSLTLTPTRSESSEGFLGLPLDSQ DSSSIGSGSNSLDDTLTHKRSSRKRDSQRVQHSHVQGNQGNQGSSNALKRLPFMRTRSKE KDKEKAIYRRSMSMNDLLQTMALAGGQWAGSTENLEAPVETNGGSGTRRMKGLGSMAYST NAINYATLTLPSGSRAKRSLKIKDNASCEDVPASSDDPIGVKGQASRPSSLHSIKTISSN SNNNSHFSPLQTKGTLNGNLSRPHSESSGEFSLSLDQEEWSSGSSPVQQPLSRSSHQSPM LLRRSLDPQARKKTSNSSGSASEVVSLQQFLEESTDPAESGSQENLTVESPRLSGGAEHV QRDRAERGSTSCTGTKGRGILRSASGKAAPVHSDSRPPRGGQPGRPSLRKAESTRVKGTV QPRVGLSSQSKAMSVSERLDISSTSFSTLPRASSVISTAEGSTRRTSIHDLLSKDARQPV SVDHSPSSKASPRSSTTPSEYPPTSNPSQHPNHQSIPLDPALVPLSLPKSVSMPCTGSQQ PPNSKETDLSSLESFFGKSFTVESVFMDSIFSEPTFTGAKSHTFLSLNTSLVSNISGPPG KTHPQPNSVQTAQNQPNGQKSCPPDQNGEQEVMDTNHVLDADQSPSQPLSPEDQQSLWYE YGCV NT seq 6135 nt NT seq  +upstreamnt  +downstreamnt atgggaagcgaggtttttacgccgttgctggagcaatttctgctcacgcctttggtcgcc tgggttaaggcggctgggcattcatctggaaacgatggcaccaaactatcggaatacatt gaattagtggatggcatttatttaaacgagatcatgcttgagataaatcctaaagccact gttcaaagaaccaacaagaaagtgaacaatgactcaacactacgcatacaaaacctctcc atcctgatccgacagatcaagtcctattaccaggagatcctccagcagctggtgatgatg cctctccccaacgtgctggtgctgggcaggaaccctctcagtgagcaaggactggaggag atgaggaagcttttgttgctgttgcttggctgtgctgtccagtgtgagaagaaagaggag tacatcgagaggatccagaccttagactttgacacaaaagctgccatagcatctcacatc caagaggtgacccacaaccaggagaatgttgtggacctgcagtggctggatgggggcgag ctgcccccagaggacctggactccttctccaggaacatggccttccatctcaaacgcata gtggacgagagagacgaccagctggagaccatcgtggagctgacccaggagagggactgt ggactgtactctccccagccgttctgcgcccagtcgcccaacgactcgcccagcatgcgc cgcacagagagccggcagcacctgtctgtggagctggccgacgccaaggccaagatcaga cgtctgcgccaggagctggaggagaagagtgagcagctgctggactgcagacaggaactg gacaacatggagactgaaaataagagggttcagcaagagagcctgcagttgttgtcggac gcccgttctgccagggcatatcgtgacgagctggacgctctgagggagaaggccgtcaga gtggacaagctggagagtgaagtgggacgctacaaggagaggctctacgacattgagttc tacaaagccagagtagaggagctgaaggaggacaaccaggttctgctggagaccaaggcc atgctagaggaccagctggaaggaaccagggctcgctctgacaaactccacgagctggag aaagagagcctgcagctcaaatccaagatccacgacatggaaatggaccgggacatggac aggaagcgtattgaggagctgctagaggagaacctagtcctggagatggcccagaaacag agcatggacgagtctctccacctggggtgggaactacagcagctctccatgacccctgac ctgacagaggtgcctcagaagtccctgggccacgaggtgaatgagctgacatccagccgg ctgctgaagctggagaaggagaaccagaccctgctgaagactgtggaggagctgagaggt tctgccagcaaacacgtccctgcacgtctcctcaaggccgacaaggagaaccagaggctc acccagaggctggtgcagctggagagtgagctgaacacagaaagggagagtctgcacagt gcagagcatcttggcaccgacctgatgaaggagaaggctctgctggagaaaaccctggag acgctgagggagaattctgagagacaggtgaaaggcctggagcaagagaacgagcatctg accaataccgtctcgtcgctgaggcaacgctcccaggtgggccctgaggcgcgggtcaaa gacgtggagaaggagaaccgcgtgctgcacgagtccatccgggagaccagctccaagctc aacaagctggagtttgagcgtaagcagctgcgtaaggacctggcggtgtacaaggagaag ggcgagaggacagaggagctggaggtggaggcgcagcggctggagagggagaacgaggcc ctgcagaagcgagtagccagcctgggcatcacctgtgacaaggtggcgtctctggagaag gagaacgcagagcttgaggctgagggccgtcgtttgaagaagaacgtggaaggcctgcgg agcacctccttccagctggaggccctggagaaggagaatgcccagctggacgaggagaac ctgaagctccgcagggctgcagaggtgctccgctcggccgggaacaaggcggctcagctg gaactggagaaccgggagctggagagcgagaggagccagctgaagagaagcctggagctg ctcaaagcctcctccaggaagacggagaggctggaggtgagctaccagggcctggacaca gagaaccagcggctgcagaaatccctagagaacagcagccgcaagatccagcagctagag ggggagctgcaggacgtagaacaggagaaccagagtctgcagaggagcctggaggaactg aagatctccagcaaacgtctggagcagctggagcaggagaataagactctggagcaggag agctctcagctggagaaggacaagaagcagctggagaaggaaaacaagaggctgagacag caggcggagatcagggactccaagctggacgaggacaacctgaggatcagccacctggag aaggagaaccgctcactgggcaaggagatgacctccttcaaggactcctgcaaccgcctt aaagacctggagaaggagaacaaagagctggtcaaacaggccactatagataagaagacc ctggtcactctgcgagaggaactggtgagtgagaaactgaggactcagcagatgaacaat gatcttgagaaactgacccacgagctggagaagataggccttaacaaggagaggttgctg caggccgagcagagctctgacgacgacaggtacaagctgctggagttcaagctagagtcc actctcaagtcttctctggagatcaaggaggagaagatagctgccttggaggccagactg caggagtcctctaacctcaaccaacaactgcgccaggagcttaaaactgtgaagaaaaac tatgaggccctgcgacagagggaggaggaggaggagaggatggtgcagagctcacccccc agaggaggggacagggaggactctcaggccgtcaacaagtgggagaaggagagccacgag accacccgggaactgctcaaggtcaaagaccgcctcattgaggtggagaggaacaatgcc accctccaggcagagaagcaggccctgcataccaacctgaagcagctagagacccagagc agtaacctgcaggcccagattctggctctgcagagacagactgcatctctacaggagaac aacaccacactacagacccagaacgccaaactccaggttgagaactcaacgctgaactcc cagagtggcgctctcatggcccagaatgcccaactggcgacgcagcagtccagtacggag aacgagaaggagggggcgatgagggacagggaagacctgaggtccacctatgagatgctg ctaagggaccatgagaaactggctgccctgcatgagagacaggcctccgagtacgagggc ctcatcggcaaacatggaggcctgaaaagttcccacaagagtctagagtcacagcacaga gacctggaggacaggtataaccagctgctgaggcagaaggatcagctggaggagctggag aaacagctgaagtcagagcaggagaagatgctgtctgagaacaagagccacgaggccacg gctgcagactaccacaaactgaaggaggagaatgaaaggctgaacatggcacaccgtcag ctggtgaaggataatgagggcctgcaggccgaccataagaacctgaagagccagatgaac ggtgccaagctggaacagacccgcatggaggcagagttctccaaactcaaagagcagtac cagcagctggacatcacctccaccaagctcactaaccagtgtgagttgctgagtcagttg aaagggaacctggaggaggagaaccgtcacctgctggaccagatccagaccctgatgctg cagaaccgcaccctgctagaacagacaatggagagcaaggacctgttccacgtagaacag agacagtacatagacaagctgaacgagttgaggagacagaaggagaagctggaggagaag atcatggatcagtataagttctacgacccctcacctccacggagacgagggaattggatc accctgaagatgaagaagctgatcaagccgaggagtcgggagcggatgcgttccctgacg ctgactcccacacgctccgagtccagcgagggcttcctggggcttcctctggacagccag gactcctcctccataggctctggctccaactccctggacgacacgctaacacacaagagg agcagcaggaagagagactctcagagagtgcagcattcccatgtgcagggtaaccagggt aaccagggttcctctaatgctctgaaaaggttgccctttatgaggaccagatcgaaggag aaagacaaagagaaggccatctaccgccggtccatgtctatgaacgacttgctacagacc atggcgctggcggggggtcagtgggcaggcagcacagagaacctggaggcgcccgtcgag accaacgggggcagcggtacccggcgaatgaaagggctgggttccatggcctactccacc aacgctatcaactacgccacactcaccctgccttcaggcagcagggccaagaggagcctg aagatcaaagacaacgcttcctgtgaagatgttccagcatcctcagacgaccccattggt gtcaaagggcaagcctccagaccctccagcctccatagtatcaagaccatcagtagtaat agcaataataactcccacttctctccactccagaccaaaggcacgttgaacggaaacctc agcaggccccacagtgagagcagtggggagttcagcctcagtctggaccaggaggagtgg tccagcgggagcagccctgtccagcagcccctgtcccgctcctctcaccagagccccatg ctgctgcggaggtccctggacccccaggccaggaagaagacgagcaactcctcgggcagc gccagtgaagtggtctctctacagcagttcctagaggagagcaccgaccctgcagagtct ggcagccaagagaatctgaccgttgagtctccccgcctctctggaggcgctgagcatgtg cagagggacagggctgagcgaggctccacctcctgcaccggcactaaggggcggggcatc ctgcgctcagccagtgggaaggcagcgccagtgcactcagacagccgccccccaaggggt ggccaaccaggtcgtcccagtctacggaaggcagagagtacgcgtgtgaagggcacggtc cagccccgggtcggcctctcctcccagagtaaagccatgtctgtgtctgagcgtctggac atctcctccacctccttctccacgctgccccgggccagcagcgtcatctccacagctgag ggctccacgcgtcggaccagcatacacgacctgctgtccaaagacgcccggcagcccgtg tctgtggaccactcaccctcctcaaaggcctcgcctcgctcctccaccacgcccagtgag taccccccaaccagtaacccctcacaacaccccaatcaccagtccatccccctagaccca gcccttgtgcccctgtccctgcccaagtcagtcagtatgccctgcacgggcagtcagcaa ccccccaatagtaaggaaactgatctctctagcctggagtccttttttggaaagtccttc acagtagagtcagtgtttatggactccatcttcagcgagccaaccttcacaggggccaag agccataccttcctctccctcaacacctccctggtcagtaacatcagtggtcccccaggc aaaacccacccccagcccaactctgttcaaactgcccagaaccaaccaaatgggcaaaag tcctgcccacctgaccagaatggggaacaggaggtaatggacaccaatcatgtactcgat gctgaccaatccccatcccaaccccttagcccagaggaccaacaatcattgtggtatgag tatggctgtgtctga

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