Oncorhynchus kisutch (coho salmon): 109890026
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Entry
109890026 CDS
T09179
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109890026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109890026
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109890026
Intermediate filaments
Intermediate filament-binding proteins
109890026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
PH_13
SOS1_NGEF_PH
CH_2
Motif
Other DBs
NCBI-GeneID:
109890026
NCBI-ProteinID:
XP_020337573
Ensembl:
ENSOKIG00005049096
LinkDB
All DBs
Position
LG4:complement(77561769..77691219)
Genome browser
AA seq
2359 aa
AA seq
DB search
MELQRATSMPGPLSPGHLSPGSHSPGALSPSGPGPSLATSPGPDLGYSAKQAAFNYNQLE
GRFKQLQDEREAVQKKTFTKWVNSHLARMSCRITDLYMDLRDGRMLIKLLEVLSGERLPK
PTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDI
RVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNAILHKHRPDLIDF
DKLKKSNAHHNLQNAFNLAEQHLGIHKLLDVEDISVDHPDEKSVITYVVTYYHYFSKMKA
LKVEGKRIGKVLDNAIETDNMIQKYENLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQ
AFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPRDGKLISDINKAWERLEKS
EHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATK
KHEAIETDIGAYEERVQAVLSVAKELEAENYHDIKRVTARKDNVLRLWEYLLELLKARRI
RLEMNLGLQRVFQEMLHIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAN
RVKAVNNSAQKFAIDAEGYKPCDPQVIRDRMAHMEFCYAELSQLAADRCARLEESRRLWK
FFWEMAEEEGWIREKEQILSSEDCGKDLTGAVRLLSQHRAFEDEMSGRAGHLQQTIKQGE
ELVAADHFGADKIRKRIQDIQAQWAALEGLSAVRKARLEEACNLHQFQADADDIDAWMLD
VLRIVSSADVGHDEFSTQALVKKHKDVAEEITSYRPVIDALHEQSKTLPKEQTGSEEVQG
RLAGIEERYKEVAELTRLRKQALQDALALYKMFNEAAACEVWIDEKEQWLNSMEIPEKLE
DLEVVQHRFESLEPEMNNQASRVAVVNQIARQLIHNGHPSEKEIKAQQDKLNTRWSQFRD
LVDLKKDSLNSALGVQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGME
RDLAAIEDKLGELGKEGECLATEHPDQAQGIMGRLGEITGVWDEMKGTLKNREESLGEAS
KLQQFFRELDDFQSWLSKTQTAIASEDMPNTLTEAEKLLAQHEGIKNEIRNYEEDYQKMR
DMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAHQLFLRDTKQAE
AFLNNQEYVLAHTEMPRTLEGAEGAIKKQEDFMTTMDANEEKIKAVVDTGRRLVSDGNVN
ADRIQEKVDSIDERHKKNRMMASELLCKLKDNRDLQKFLQDCQELSLWINEKMLTAQDMS
YDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGMQLIAEKPETESMVKEKLAALHKMW
DDLESTTQTKAKCLFDANKAELFTQSCADLDKWLVGVDGQIQSDDYGKDLTSVNILLKKQ
QMLESQVEVRQKEVEELQSQAQVLSQEGKDTDEVDGQRRIVEKKFQQLLDPLRKRKGNLM
ASREIHQFNRDMEDEILWVEERMPLAISTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRCD
DIFERSLPVLKDDDDSLGGEGIHQRLADLRRLWAQILEETGKRHGRLEEAHMAQQYYFDA
AEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSQTSRGLTAA
GHPESERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVA
GSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNQLADELINSGHTDAATIAEWKD
GLNEAWADLLELIDTRTQILAASFELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVET
LQRMHTTFEHDIQALGTQVRTLQEDAVRLQSAYAGDKADDIQKREGEVLEAWRTLLEACD
GRRVRLLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEID
ARNNSFTNCIELGKSLLARKHYAYEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLVLEVHQ
FGRDAGVAESWLLGQEPYLSSREMGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLTT
MELLEVRRQQEEEERKRNPPPAETQTDDASPQQREGEQVSQNGLPSDQDSPRDNVEESDI
VNGVEEPSPGGSPGEARKVKPSQAATLPPKSQDTDPANQMEGYLHRKHEWEGHNKKASSR
SWHNVYCVINNREMGFYKDHKSASQGIPYHNQIPISLKDAVCEVALDYKKKKHVFKLKAT
DGNEYLFQANEDEEMNSWMQAISSAASSDKTEMTPSSHSTPASSRAQTLPASVTLATESS
PGKREKDKEKRFSLFSKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atggagctacagagggcgaccagtatgcctggccccttgtccccagggcatctctctcca
gggtcccactccccaggggccctgtccccttctgggcctggcccctctctagccaccagc
cctggccctgatctgggctactccgccaaacaggctgccttcaactacaaccagctggag
ggccgctttaagcagttgcaagatgagcgcgaggcggtgcagaagaagaccttcaccaag
tgggtcaactcccacctagccagaatgtcctgcaggatcactgacctctatatggacctg
agggatggacgtatgctcatcaaactactggaggtcctctccggggagagactgcccaag
cccactaaggggcgcatgcgtatccactgcctggagaacgtggacaaggccctgcagttc
ctcaaggagcagagggtccatctggagaatatgggctcccacgacattgtcgacggcaac
caccgcctcaccctcggcctaatctggaccatcatcctccgcttccagatccaggacatc
agagtggagactgaggacaacaaggagaagaagtctgctaaagatgccctgctgctgtgg
tgccagatgaagactgcaggatatcccaacgtgaacattcacaacttcagcaccagctgg
agagatggcatggccttcaacgccatcctccacaaacacagacctgatctgatagacttt
gacaagctgaagaagtccaacgcccaccacaatctgcagaatgccttcaacctggcagag
caacacctgggcatccacaagctgctggacgtagaggatatcagcgtggaccacccggat
gagaagtccgtcatcacctatgttgtgacctactaccactacttctccaaaatgaaggct
ctgaaggtggagggaaaacgtattgggaaggtgctggacaatgccattgagacagataac
atgattcagaaatatgagaatctggcctctgacctcctggaatggattgaacagaccatc
atcatcctcaacaaccgcaagtttgccaactccttagtgggggtgcagcaacagcttcag
gccttcaacacctaccgtactgtggaaaagccccccaagttcacagagaagggcaacctg
gaggttctcctcttcaccattcaaagtaagatgagggccaacaatcagaaggtctacatg
ccacgggacggcaaactcatctcagacatcaacaaggcctgggagaggctggagaagtct
gagcatgagagggagctggcgctgaggacggagctgattcgtcaggagaaactggagcag
ctggcccgccgcttcgaccgcaaggccgccatgagagagacctggctgagtgaaaaccaa
cgcctcgtctcgcaggacaactttggtttcgacctgcaggcagtggaggctgccaccaaa
aagcacgaggccattgagacggacatcggcgcctacgaggagcgtgtgcaggctgtgctc
tctgtggccaaggagctggaggcggagaactaccacgacatcaagcgcgtgactgcgagg
aaggacaatgtgctgcgtctgtgggagtacctgctggagctgctgaaggcccggcgcatc
cggctggagatgaacctgggcctgcaaagggtctttcaagagatgctccacatcatggac
tggatggacgagatgaagatgctgctgctttcccaggactatgggaaacacctgctggga
gttgaggacctgctgcagaagcatgctctggtggaggctgatatcgccatccaagccaac
cgcgtcaaagccgtcaacaacagcgctcagaagttcgccatcgacgcagagggctacaag
ccctgtgacccccaggtgatccgagaccgcatggcccacatggagttctgctacgcagag
ctgagccagctggccgccgatcgctgcgcccgcctggaggagtcccgccgcctctggaag
ttcttctgggagatggccgaggaggagggctggatccgggagaaggaacagatcctgtcc
tcggaggactgtggcaaggacctgacgggggccgtgcgcctgctgagccagcatcgtgcc
ttcgaggacgagatgagcggtcgagctggccacttgcagcagaccatcaaacagggagag
gagctggtggccgccgaccacttcggcgccgacaagatccgcaaacgcatccaagacatc
caggcgcagtgggcggccctggaggggctgtctgcagtcaggaaggcccggctggaggag
gcctgcaacctgcaccagttccaggctgacgccgatgacattgacgcctggatgctggat
gttctccgcatcgtgtccagtgctgacgttggccacgacgagttctccacccaggccctg
gtcaagaagcacaaggacgtggccgaggagatcaccagctaccgaccagtcatcgacgcc
ctgcacgagcagtccaaaaccctacccaaggagcaaactggctcagaggaggtgcagggg
cgcctggcaggcattgaggagcgctacaaggaggtggctgagctgacccgactgaggaaa
caggccttgcaggatgccctggccctctataagatgttcaacgaggcggccgcctgtgag
gtgtggatcgacgagaaggagcagtggctcaacagtatggagataccagagaaactggaa
gatctggaagtggttcagcacaggtttgagagtctggagccagagatgaacaaccaagca
tcccgcgttgccgtggtgaaccagattgctaggcaactcatccacaacggtcaccccagt
gagaaggagatcaaagcccaacaggacaaactcaacaccagatggagccagttccgtgac
ctagttgacctgaagaaagactccctcaactcagctctgggcgtgcagaactaccacctg
gagtgcaatgaaaccaagtcgtggatccgtgagaagaccaaggttatcgagtccacccag
gagctgggcaacgatcttgccggggtcatggccctacagcgcaaactcaccggcatggag
cgtgacctggctgccatcgaggacaagctgggagaactggggaaggagggggagtgcctg
gcgactgagcaccctgaccaggcccagggcatcatgggtcgtctgggggagatcacaggg
gtgtgggatgagatgaagggcaccttgaagaatcgcgaggagtctcttggcgaagccagc
aagctgcagcagttcttccgggagctggatgacttccaatcatggctgtcaaagacccag
acggccatcgcctcagaggacatgcccaacacactgactgaggccgagaagcttctggcg
cagcacgagggcatcaagaatgagatccgcaactacgaggaggactaccagaagatgagg
gacatgggcgagatggtgacccagggccagacggacgcccagtacatgttcctgaggcag
aggctgcaggccctcgacacgggctggaacgagctgcacaagatgtgggagaaccgtcag
aacctactgtcccagtcccatgcccaccagctgttcctcagggacaccaagcaggctgag
gccttcctcaacaaccaggagtatgtgctggcccatacagagatgcccaggactctggag
ggggcggagggagccattaagaagcaggaggacttcatgactaccatggacgccaacgag
gagaagatcaaagctgtggtggacaccggacgcaggctggtcagcgacggaaatgtcaac
gctgaccgcatccaggagaaagtggactctatcgatgagagacataagaagaaccgcatg
atggccagtgagcttctctgtaagctgaaggataacagagacctgcagaagttcctccag
gactgccaagagctctccctgtggatcaatgagaagatgctcacagctcaggacatgtcg
tacgacgaagccagaaacctccacagcaaatggctcaaacaccaggcattcatggccgag
ctgcagtccaacaaggagtggctggacaagatcgagaaggatggaatgcagctgatagct
gagaagccggagactgagtccatggtgaaggaaaagctggcagcgctccataagatgtgg
gatgacctggagtccaccacccagaccaaggccaagtgtctgtttgatgccaacaaggcc
gagctgttcacccagagctgtgccgacctagacaagtggctggtaggagtggatggacag
atccaatcagacgactacggcaaagatctgaccagtgtcaacatcctgctcaagaaacaa
cagatgctggagagccaggtggaggtgcgtcagaaggaggtggaggagctgcagagccag
gcccaggtcctcagccaggaggggaaggatacggacgaggtggacggccagcgccgcatc
gtggagaagaagttccagcagctgctggaccctctacggaagaggaagggaaacctcatg
gcctcccgcgagatccaccagttcaacagagacatggaggatgagatcctctgggttgaa
gagcgaatgccacttgcaatatcaacagaccacggaaacaacctgcaaacagtccagtta
ctcatcaagaaaaaccagaccctgcagaaggagatccagggccaccagccccgttgtgat
gacatctttgagcggagcctgccggtcctcaaggatgatgacgacagcctcggcggagag
gggatccatcagcggctggccgacctacggcgcctgtgggcccagattctggaggagacg
ggcaaacgccatggacgcctggaggaggcccacatggcccaacagtactactttgatgct
gctgaagccgaggcctggatgagcgagcaggagctctacatgatgtcagaggagaaagcc
aaggatgagcagagctctgtggccatgttgaagaagcaccagatactggagcaggctgtg
gaagactacgctgaaactgtccaccagctgtcccagacaagtagaggcctgacggctgcc
ggacaccctgaaagtgagcggatcggcatgcgtcagtcccaggtggataagctgtacgca
gggctcaaggacctgtcggaggagaggagggggaagctggacgagaggttccgtctgttc
cagctcaacagggaggtggatgacctggagcagtggatcgctgaaagggaagtagtagct
gggtcacatgagctgggacaggactacgaacatgtcacgatgcttcaggagcgtttccgt
gagtttgctcgcgacacgggcaacatcggtcaggagcgtgtggacaccgtcaaccagttg
gcggatgagctcatcaactcgggccacaccgacgcggcaacaatcgcggagtggaaggac
gggctgaatgaagcgtgggccgacctgctggagctaatcgacacacgcacgcagatcctg
gcggcttcctttgagctgcataagttctaccatgacgccaaggagatcctcaaccgcatc
ctggacaaacacaagaagctgcctgaggagctgggccgagaccagaacacagtggagacc
ctgcagaggatgcacaccacctttgaacacgacatccaggccctggggacacaggtgagg
acgttgcaggaggatgctgtgcgtctgcagtctgcctacgccggagacaaggctgatgac
atccaaaagagagagggtgaggtgctggaggcctggaggaccctgctggaggcctgcgac
ggccgcagggtcagactgctcgacaccggcgacaagtttcgcttcttcagcatggtgcga
gacctcatgctctggatggaggacgtcatccgcctcatcgaggctcaggagaagcccagg
gacgtgtcgtccgtggagctcctgatgaacaaccaccaaggcatcaaggctgagatcgac
gcccgcaacaacagcttcaccaactgcatcgagctgggcaagtccctgttggcaaggaaa
cactacgcatacgaggagatcaaagagaagttactacagttgacagacaaaaggaaagac
atgattgacaagtgggaggacagatgggagtggctaagattggttctggaggtgcaccag
tttggtagggatgcgggtgtggctgagtcatggctgctgggacaggagccgtacctgtcc
agcagggagatggggcagaacgtggacgaggtggagaaactcatcaagagacacgaggcc
tttgagaagtccgctgccacctgggaggagcgcttctcagcgctggaacggctgactacg
atggaattactggaagtgagaagacagcaagaggaggaagagaggaagaggaatccgcca
cctgcagagacccagacggacgatgcatcgccacagcagagggagggtgagcaggtgtct
cagaacggactgccatcggaccaggactctcctcgggacaacgtagaggaaagtgacatc
gttaatggggttgaggagcccagcccaggcgggtcgcccggtgaagcacgcaaggtcaag
cccagccaggctgccacactcccgcccaagtcccaggacacagacccagccaaccagatg
gaaggctacctgcaccgcaaacacgagtgggagggtcacaacaagaaggcatccagcaga
tcctggcacaatgtgtattgcgtgatcaacaaccgggagatgggcttttacaaagaccat
aagagtgccagccaggggatcccttaccacaaccagatccccatcagcctgaaggatgct
gtgtgtgaggtcgccctcgactacaagaagaagaaacatgtgttcaaactgaaagctaca
gatggcaatgagtatctcttccaagccaacgaggatgaggagatgaactcgtggatgcaa
gccatctccagcgctgcgtcctctgataagacagagatgacccccagcagccatagcacc
cctgcctccagccgagcccagaccctgcccgcctccgtcaccctggcaactgagtccagc
cctggcaagcgtgagaaggacaaagaaaagcgcttcagccttttcagcaaaaagaaatag
DBGET
integrated database retrieval system
