Oncorhynchus kisutch (coho salmon): 109890026
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Entry
109890026 CDS
T09179
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109890026
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109890026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109890026
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109890026
Intermediate filaments
Intermediate filament-binding proteins
109890026
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_13
SOS1_NGEF_PH
CH_2
Motif
Other DBs
NCBI-GeneID:
109890026
NCBI-ProteinID:
XP_020337573
Ensembl:
ENSOKIG00005049096
LinkDB
All DBs
Position
LG4:complement(77561769..77691219)
Genome browser
AA seq
2359 aa
AA seq
DB search
MELQRATSMPGPLSPGHLSPGSHSPGALSPSGPGPSLATSPGPDLGYSAKQAAFNYNQLE
GRFKQLQDEREAVQKKTFTKWVNSHLARMSCRITDLYMDLRDGRMLIKLLEVLSGERLPK
PTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDI
RVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNAILHKHRPDLIDF
DKLKKSNAHHNLQNAFNLAEQHLGIHKLLDVEDISVDHPDEKSVITYVVTYYHYFSKMKA
LKVEGKRIGKVLDNAIETDNMIQKYENLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQ
AFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPRDGKLISDINKAWERLEKS
EHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATK
KHEAIETDIGAYEERVQAVLSVAKELEAENYHDIKRVTARKDNVLRLWEYLLELLKARRI
RLEMNLGLQRVFQEMLHIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAN
RVKAVNNSAQKFAIDAEGYKPCDPQVIRDRMAHMEFCYAELSQLAADRCARLEESRRLWK
FFWEMAEEEGWIREKEQILSSEDCGKDLTGAVRLLSQHRAFEDEMSGRAGHLQQTIKQGE
ELVAADHFGADKIRKRIQDIQAQWAALEGLSAVRKARLEEACNLHQFQADADDIDAWMLD
VLRIVSSADVGHDEFSTQALVKKHKDVAEEITSYRPVIDALHEQSKTLPKEQTGSEEVQG
RLAGIEERYKEVAELTRLRKQALQDALALYKMFNEAAACEVWIDEKEQWLNSMEIPEKLE
DLEVVQHRFESLEPEMNNQASRVAVVNQIARQLIHNGHPSEKEIKAQQDKLNTRWSQFRD
LVDLKKDSLNSALGVQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGME
RDLAAIEDKLGELGKEGECLATEHPDQAQGIMGRLGEITGVWDEMKGTLKNREESLGEAS
KLQQFFRELDDFQSWLSKTQTAIASEDMPNTLTEAEKLLAQHEGIKNEIRNYEEDYQKMR
DMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAHQLFLRDTKQAE
AFLNNQEYVLAHTEMPRTLEGAEGAIKKQEDFMTTMDANEEKIKAVVDTGRRLVSDGNVN
ADRIQEKVDSIDERHKKNRMMASELLCKLKDNRDLQKFLQDCQELSLWINEKMLTAQDMS
YDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGMQLIAEKPETESMVKEKLAALHKMW
DDLESTTQTKAKCLFDANKAELFTQSCADLDKWLVGVDGQIQSDDYGKDLTSVNILLKKQ
QMLESQVEVRQKEVEELQSQAQVLSQEGKDTDEVDGQRRIVEKKFQQLLDPLRKRKGNLM
ASREIHQFNRDMEDEILWVEERMPLAISTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRCD
DIFERSLPVLKDDDDSLGGEGIHQRLADLRRLWAQILEETGKRHGRLEEAHMAQQYYFDA
AEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSQTSRGLTAA
GHPESERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVA
GSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNQLADELINSGHTDAATIAEWKD
GLNEAWADLLELIDTRTQILAASFELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVET
LQRMHTTFEHDIQALGTQVRTLQEDAVRLQSAYAGDKADDIQKREGEVLEAWRTLLEACD
GRRVRLLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEID
ARNNSFTNCIELGKSLLARKHYAYEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLVLEVHQ
FGRDAGVAESWLLGQEPYLSSREMGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLTT
MELLEVRRQQEEEERKRNPPPAETQTDDASPQQREGEQVSQNGLPSDQDSPRDNVEESDI
VNGVEEPSPGGSPGEARKVKPSQAATLPPKSQDTDPANQMEGYLHRKHEWEGHNKKASSR
SWHNVYCVINNREMGFYKDHKSASQGIPYHNQIPISLKDAVCEVALDYKKKKHVFKLKAT
DGNEYLFQANEDEEMNSWMQAISSAASSDKTEMTPSSHSTPASSRAQTLPASVTLATESS
PGKREKDKEKRFSLFSKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atggagctacagagggcgaccagtatgcctggccccttgtccccagggcatctctctcca
gggtcccactccccaggggccctgtccccttctgggcctggcccctctctagccaccagc
cctggccctgatctgggctactccgccaaacaggctgccttcaactacaaccagctggag
ggccgctttaagcagttgcaagatgagcgcgaggcggtgcagaagaagaccttcaccaag
tgggtcaactcccacctagccagaatgtcctgcaggatcactgacctctatatggacctg
agggatggacgtatgctcatcaaactactggaggtcctctccggggagagactgcccaag
cccactaaggggcgcatgcgtatccactgcctggagaacgtggacaaggccctgcagttc
ctcaaggagcagagggtccatctggagaatatgggctcccacgacattgtcgacggcaac
caccgcctcaccctcggcctaatctggaccatcatcctccgcttccagatccaggacatc
agagtggagactgaggacaacaaggagaagaagtctgctaaagatgccctgctgctgtgg
tgccagatgaagactgcaggatatcccaacgtgaacattcacaacttcagcaccagctgg
agagatggcatggccttcaacgccatcctccacaaacacagacctgatctgatagacttt
gacaagctgaagaagtccaacgcccaccacaatctgcagaatgccttcaacctggcagag
caacacctgggcatccacaagctgctggacgtagaggatatcagcgtggaccacccggat
gagaagtccgtcatcacctatgttgtgacctactaccactacttctccaaaatgaaggct
ctgaaggtggagggaaaacgtattgggaaggtgctggacaatgccattgagacagataac
atgattcagaaatatgagaatctggcctctgacctcctggaatggattgaacagaccatc
atcatcctcaacaaccgcaagtttgccaactccttagtgggggtgcagcaacagcttcag
gccttcaacacctaccgtactgtggaaaagccccccaagttcacagagaagggcaacctg
gaggttctcctcttcaccattcaaagtaagatgagggccaacaatcagaaggtctacatg
ccacgggacggcaaactcatctcagacatcaacaaggcctgggagaggctggagaagtct
gagcatgagagggagctggcgctgaggacggagctgattcgtcaggagaaactggagcag
ctggcccgccgcttcgaccgcaaggccgccatgagagagacctggctgagtgaaaaccaa
cgcctcgtctcgcaggacaactttggtttcgacctgcaggcagtggaggctgccaccaaa
aagcacgaggccattgagacggacatcggcgcctacgaggagcgtgtgcaggctgtgctc
tctgtggccaaggagctggaggcggagaactaccacgacatcaagcgcgtgactgcgagg
aaggacaatgtgctgcgtctgtgggagtacctgctggagctgctgaaggcccggcgcatc
cggctggagatgaacctgggcctgcaaagggtctttcaagagatgctccacatcatggac
tggatggacgagatgaagatgctgctgctttcccaggactatgggaaacacctgctggga
gttgaggacctgctgcagaagcatgctctggtggaggctgatatcgccatccaagccaac
cgcgtcaaagccgtcaacaacagcgctcagaagttcgccatcgacgcagagggctacaag
ccctgtgacccccaggtgatccgagaccgcatggcccacatggagttctgctacgcagag
ctgagccagctggccgccgatcgctgcgcccgcctggaggagtcccgccgcctctggaag
ttcttctgggagatggccgaggaggagggctggatccgggagaaggaacagatcctgtcc
tcggaggactgtggcaaggacctgacgggggccgtgcgcctgctgagccagcatcgtgcc
ttcgaggacgagatgagcggtcgagctggccacttgcagcagaccatcaaacagggagag
gagctggtggccgccgaccacttcggcgccgacaagatccgcaaacgcatccaagacatc
caggcgcagtgggcggccctggaggggctgtctgcagtcaggaaggcccggctggaggag
gcctgcaacctgcaccagttccaggctgacgccgatgacattgacgcctggatgctggat
gttctccgcatcgtgtccagtgctgacgttggccacgacgagttctccacccaggccctg
gtcaagaagcacaaggacgtggccgaggagatcaccagctaccgaccagtcatcgacgcc
ctgcacgagcagtccaaaaccctacccaaggagcaaactggctcagaggaggtgcagggg
cgcctggcaggcattgaggagcgctacaaggaggtggctgagctgacccgactgaggaaa
caggccttgcaggatgccctggccctctataagatgttcaacgaggcggccgcctgtgag
gtgtggatcgacgagaaggagcagtggctcaacagtatggagataccagagaaactggaa
gatctggaagtggttcagcacaggtttgagagtctggagccagagatgaacaaccaagca
tcccgcgttgccgtggtgaaccagattgctaggcaactcatccacaacggtcaccccagt
gagaaggagatcaaagcccaacaggacaaactcaacaccagatggagccagttccgtgac
ctagttgacctgaagaaagactccctcaactcagctctgggcgtgcagaactaccacctg
gagtgcaatgaaaccaagtcgtggatccgtgagaagaccaaggttatcgagtccacccag
gagctgggcaacgatcttgccggggtcatggccctacagcgcaaactcaccggcatggag
cgtgacctggctgccatcgaggacaagctgggagaactggggaaggagggggagtgcctg
gcgactgagcaccctgaccaggcccagggcatcatgggtcgtctgggggagatcacaggg
gtgtgggatgagatgaagggcaccttgaagaatcgcgaggagtctcttggcgaagccagc
aagctgcagcagttcttccgggagctggatgacttccaatcatggctgtcaaagacccag
acggccatcgcctcagaggacatgcccaacacactgactgaggccgagaagcttctggcg
cagcacgagggcatcaagaatgagatccgcaactacgaggaggactaccagaagatgagg
gacatgggcgagatggtgacccagggccagacggacgcccagtacatgttcctgaggcag
aggctgcaggccctcgacacgggctggaacgagctgcacaagatgtgggagaaccgtcag
aacctactgtcccagtcccatgcccaccagctgttcctcagggacaccaagcaggctgag
gccttcctcaacaaccaggagtatgtgctggcccatacagagatgcccaggactctggag
ggggcggagggagccattaagaagcaggaggacttcatgactaccatggacgccaacgag
gagaagatcaaagctgtggtggacaccggacgcaggctggtcagcgacggaaatgtcaac
gctgaccgcatccaggagaaagtggactctatcgatgagagacataagaagaaccgcatg
atggccagtgagcttctctgtaagctgaaggataacagagacctgcagaagttcctccag
gactgccaagagctctccctgtggatcaatgagaagatgctcacagctcaggacatgtcg
tacgacgaagccagaaacctccacagcaaatggctcaaacaccaggcattcatggccgag
ctgcagtccaacaaggagtggctggacaagatcgagaaggatggaatgcagctgatagct
gagaagccggagactgagtccatggtgaaggaaaagctggcagcgctccataagatgtgg
gatgacctggagtccaccacccagaccaaggccaagtgtctgtttgatgccaacaaggcc
gagctgttcacccagagctgtgccgacctagacaagtggctggtaggagtggatggacag
atccaatcagacgactacggcaaagatctgaccagtgtcaacatcctgctcaagaaacaa
cagatgctggagagccaggtggaggtgcgtcagaaggaggtggaggagctgcagagccag
gcccaggtcctcagccaggaggggaaggatacggacgaggtggacggccagcgccgcatc
gtggagaagaagttccagcagctgctggaccctctacggaagaggaagggaaacctcatg
gcctcccgcgagatccaccagttcaacagagacatggaggatgagatcctctgggttgaa
gagcgaatgccacttgcaatatcaacagaccacggaaacaacctgcaaacagtccagtta
ctcatcaagaaaaaccagaccctgcagaaggagatccagggccaccagccccgttgtgat
gacatctttgagcggagcctgccggtcctcaaggatgatgacgacagcctcggcggagag
gggatccatcagcggctggccgacctacggcgcctgtgggcccagattctggaggagacg
ggcaaacgccatggacgcctggaggaggcccacatggcccaacagtactactttgatgct
gctgaagccgaggcctggatgagcgagcaggagctctacatgatgtcagaggagaaagcc
aaggatgagcagagctctgtggccatgttgaagaagcaccagatactggagcaggctgtg
gaagactacgctgaaactgtccaccagctgtcccagacaagtagaggcctgacggctgcc
ggacaccctgaaagtgagcggatcggcatgcgtcagtcccaggtggataagctgtacgca
gggctcaaggacctgtcggaggagaggagggggaagctggacgagaggttccgtctgttc
cagctcaacagggaggtggatgacctggagcagtggatcgctgaaagggaagtagtagct
gggtcacatgagctgggacaggactacgaacatgtcacgatgcttcaggagcgtttccgt
gagtttgctcgcgacacgggcaacatcggtcaggagcgtgtggacaccgtcaaccagttg
gcggatgagctcatcaactcgggccacaccgacgcggcaacaatcgcggagtggaaggac
gggctgaatgaagcgtgggccgacctgctggagctaatcgacacacgcacgcagatcctg
gcggcttcctttgagctgcataagttctaccatgacgccaaggagatcctcaaccgcatc
ctggacaaacacaagaagctgcctgaggagctgggccgagaccagaacacagtggagacc
ctgcagaggatgcacaccacctttgaacacgacatccaggccctggggacacaggtgagg
acgttgcaggaggatgctgtgcgtctgcagtctgcctacgccggagacaaggctgatgac
atccaaaagagagagggtgaggtgctggaggcctggaggaccctgctggaggcctgcgac
ggccgcagggtcagactgctcgacaccggcgacaagtttcgcttcttcagcatggtgcga
gacctcatgctctggatggaggacgtcatccgcctcatcgaggctcaggagaagcccagg
gacgtgtcgtccgtggagctcctgatgaacaaccaccaaggcatcaaggctgagatcgac
gcccgcaacaacagcttcaccaactgcatcgagctgggcaagtccctgttggcaaggaaa
cactacgcatacgaggagatcaaagagaagttactacagttgacagacaaaaggaaagac
atgattgacaagtgggaggacagatgggagtggctaagattggttctggaggtgcaccag
tttggtagggatgcgggtgtggctgagtcatggctgctgggacaggagccgtacctgtcc
agcagggagatggggcagaacgtggacgaggtggagaaactcatcaagagacacgaggcc
tttgagaagtccgctgccacctgggaggagcgcttctcagcgctggaacggctgactacg
atggaattactggaagtgagaagacagcaagaggaggaagagaggaagaggaatccgcca
cctgcagagacccagacggacgatgcatcgccacagcagagggagggtgagcaggtgtct
cagaacggactgccatcggaccaggactctcctcgggacaacgtagaggaaagtgacatc
gttaatggggttgaggagcccagcccaggcgggtcgcccggtgaagcacgcaaggtcaag
cccagccaggctgccacactcccgcccaagtcccaggacacagacccagccaaccagatg
gaaggctacctgcaccgcaaacacgagtgggagggtcacaacaagaaggcatccagcaga
tcctggcacaatgtgtattgcgtgatcaacaaccgggagatgggcttttacaaagaccat
aagagtgccagccaggggatcccttaccacaaccagatccccatcagcctgaaggatgct
gtgtgtgaggtcgccctcgactacaagaagaagaaacatgtgttcaaactgaaagctaca
gatggcaatgagtatctcttccaagccaacgaggatgaggagatgaactcgtggatgcaa
gccatctccagcgctgcgtcctctgataagacagagatgacccccagcagccatagcacc
cctgcctccagccgagcccagaccctgcccgcctccgtcaccctggcaactgagtccagc
cctggcaagcgtgagaaggacaaagaaaagcgcttcagccttttcagcaaaaagaaatag
DBGET
integrated database retrieval system
