Oncorhynchus kisutch (coho salmon): 109890032
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Entry
109890032 CDS
T09179
Name
(RefSeq) protein jagged-1b-like isoform X1
KO
K06052
jagged-1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04330
Notch signaling pathway
oki04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109890032
04371 Apelin signaling pathway
109890032
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oki04090
]
109890032
CD molecules [BR:
oki04090
]
Proteins
109890032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_DL_JAG
EGF_2
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
EGF_3
DAG1
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
109890032
NCBI-ProteinID:
XP_020337584
Ensembl:
ENSOKIG00005030677
LinkDB
All DBs
Position
LG1:61047795..61078103
Genome browser
AA seq
1245 aa
AA seq
DB search
MILRLSSICVAFSIHVFLQCMWIKVAVASGHFELQIVSMQNVNGELQTGVCCDGSRNAAD
RKCTRDECDTYFKVCLKEYQLKVSSAGPCSFGTASTPVVGGNTFSLRSMRSDKSRIVLPF
SFAWPRSYTLIVEALDFNNDSSTGSGGGEMIEKAVQSGMINPSRQWQSLKHNGPVGQFEY
QIRVSCDEHYYGFGCNKFCRPRDDFFGHYNCDHNGNKTCLEGWSGLECSTAICRQGCSTE
HGSCKLPGDCKCLYGWQGEYCDKCIPHPGCVHGTCVEPWQCLCDTNFGGQLCDKDLNTCG
TFQPCLNMGTCSNTGPDKYHCACPEGYSGVNCEKAEHACLSEPCFNGGRCVETSQGFECQ
CAPGWSGPSCSINVDECLPNPCGHGGTCQDQVNGFKCTCPSQWSGKTCLIDANECEGDPC
LNANSCRNLIGGYFCECLPGWMGQNCETNINDCLDQCQNGGKCKDMVNGYRCVCPSGFGG
EHCEKDVDECASGPCLNGGRCKDDVNGFQCLCLPGFSGNFCQLDIDYCMPSPCQNRAQCF
NLAIDYFCKCPEDYEGKNCSHLKDHCRTTPCKVIDSCTVSVASNSTPGGVRLISSNVCGP
HGRCRSQAGGQFSCECQEGFTGTYCHENINDCESGPCQNGGTCIDKVSLYQCICAEGWEG
PNCDDNIDDCNTNPCRNRGTCRDLVNDFYCECKNGWKGKTCHSRESQCDEATCNNGGTCY
DEGDTFKCMCAAGWEGATCNIAKNSSCLPSPCENGGTCVVSGDSFTCVCKEGWEGLTCNQ
NSNDCNPHPCYNSGTCVDGDNWYRCECAAGFAGPDCRININECQSSPCAFGSTCVDEING
YRCLCPPGRAGPRCQEVTVRPCVVNSLVAVDGTKWDDDCNTCQCHNGKVTCTKIWCGPKS
CRVHSKSHSDGECPVGQTCVPVRDERCFVKPCPSQGECWSASHSLPPHAKCHPESNCANV
TFTFNKDTMPQGLTVEHICGELRSLYVVRNLSSEYSVSMTCEPSTTTNNEINVAISTEDP
RRGKAPIKEITDKFIDLVSKRNGNSTIITAIVEVRVQRRQTHNPNADYLVPLLVSVVIVI
WLLAVASAFIWCLKRRRKPSTHTGVSTQSTSPATTAEDTNNAVNNVREQLNQIKNPIDKH
GPTNGLPPVKEHPNHYHYEDKNSLTNAKIRTNNSDVGSHHSDDEESEKRLQKARFPRQTP
YTLVDREERSPQPLSTAGKHPNWTNKQDNRDLESTQSLNRMEFIV
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagactgagttcaatctgtgttgccttttctattcatgtcttcttgcaatgc
atgtggattaaggtggctgttgcatctggacacttcgaattgcaaattgtatcgatgcag
aacgtgaatggcgaactgcagactggcgtgtgctgcgatggatctcggaatgccgccgat
cgcaagtgcacgagggacgagtgtgatacctattttaaagtgtgtctaaaggagtaccag
ttgaaggtctcttcggcgggaccatgcagtttcgggacggcttctacacccgtggtcgga
gggaatactttttctttgcggagcatgaggagtgacaagtcgaggattgtattacctttc
agcttcgcttggccgaggtcctatacattgatcgtggaggccttggacttcaacaatgac
tcttctacgggcagtgggggaggcgagatgatcgagaaggccgttcagtcgggcatgatc
aaccccagccgccagtggcagagcctgaagcacaacgggccggtgggccagttcgagtac
cagatccgggtcagctgcgatgagcattactacggttttggctgcaacaagttctgccgt
ccgcgcgacgacttttttggccactacaactgcgaccacaacggcaacaagacctgcctc
gaagggtggtccggactagaatgcagcactgctatttgcaggcaaggctgcagcactgaa
catggttcctgtaaattgcccggagattgcaagtgtctgtacggctggcagggcgagtac
tgtgataagtgcattcctcacccgggctgtgtgcacggaacctgcgtggaaccgtggcag
tgcctctgtgacacaaactttggcggccagctctgcgacaaagacctgaacacatgtggt
acgttccagccctgtttgaacatggggacctgcagcaacactggacctgacaagtaccac
tgtgcctgtcctgaaggctactctggtgtcaactgcgaaaaagcagagcatgcttgtctg
tcggagccctgttttaacggagggagatgtgtggagaccagtcagggcttcgagtgccag
tgtgcccccggctggagtggcccttcctgcagcatcaatgtggacgagtgtttgcccaac
ccctgtggccacgggggcacctgccaggaccaggtcaacggcttcaagtgcacctgtccc
tcccagtggagcggcaagacctgcctcattgacgccaatgagtgcgaaggcgacccctgc
ctgaatgccaactcctgccgcaacctgattggagggtacttctgcgagtgcctccctggt
tggatgggccagaactgcgaaaccaatatcaatgactgcctggaccagtgtcaaaatggg
ggaaaatgcaaggacatggtgaatgggtaccgttgcgtttgtccgtcgggcttcggcggc
gagcactgcgagaaggacgtagacgagtgcgccagtggcccgtgcttgaacggcggccgt
tgcaaggacgacgtcaatggcttccagtgcctgtgcctgcccggtttctctggcaacttc
tgtcagttggatatcgactactgcatgccgagcccatgtcaaaacagggcccagtgtttc
aacctggctattgattacttctgcaaatgtccagaagactacgagggcaagaactgttcc
catttgaaggaccactgtcggaccacaccatgcaaagtgattgacagctgcacggtttcc
gtggcatccaacagcacccctgggggcgtgcgtctgatttcgtccaacgtgtgcgggccc
cacgggcgctgccggagccaggctgggggccagttcagctgcgagtgccaggagggcttc
accgggacatactgccatgagaatataaatgactgtgaaagtggcccatgtcagaacggg
ggaacgtgtattgacaaagtcagcctgtaccagtgcatctgtgccgagggctgggaggga
cccaactgtgacgacaacattgatgactgcaacaccaacccatgtcgcaaccgcggcacg
tgccgagacctggtgaacgacttctactgcgagtgtaagaacggatggaagggcaagaca
tgtcactcaagagagagccagtgtgacgaggctacgtgcaacaatggcggaacgtgctac
gatgaaggggacaccttcaaatgcatgtgtgccgccggatgggagggtgccacctgtaat
atagctaagaacagcagctgtctgcctagtccttgtgagaacggaggcacctgtgtagtc
agtggagactctttcacctgcgtctgcaaagagggctgggagggcctgacctgcaaccaa
aattccaacgactgcaatccccacccttgctataacagtggaacctgtgtggatggagat
aactggtaccggtgtgagtgtgccgcgggatttgccggaccagactgccggattaacatc
aacgagtgccagtcgtcgccctgcgcattcggctccacctgcgtagacgagatcaacggc
taccgctgcctgtgtccaccagggagggctggccccaggtgccaggaagttactgtgaga
ccctgtgttgtcaacagtctagtggctgtggatgggaccaaatgggatgacgattgcaac
acctgccagtgccacaatgggaaggtcacctgtacaaagatctggtgtggtcccaaatcc
tgccgggtccacagtaaaagtcacagcgatggcgagtgcccagttggtcagacgtgtgtg
cccgtcagggacgagcgctgttttgtcaagccatgccccagccagggcgagtgctggtcg
gcctcccacagtctcccgccccatgcgaagtgccaccccgagagcaactgtgccaatgtc
acattcaccttcaacaaggacaccatgccacagggcttgactgttgagcacatctgcggt
gagctaaggagtctgtatgtggtgaggaacctctcgtcggagtactcggtgtccatgaca
tgcgagccatcgaccaccaccaacaacgagatcaatgtagccatttcaacggaggacccc
agacgaggcaaggcccctatcaaggagatcacggacaaattcatagacctggtcagcaag
cgaaacggaaacagcactatcatcacagccattgttgaagtccgtgtccagaggaggcag
acccacaaccccaatgcagactacttggtccccttgctggtgtccgtagtcatcgtcatc
tggctcctggctgtggcctctgcgtttatctggtgcctcaagcggcgccggaagcccagc
acccacacgggtgtcagcacccagtcgacgtcccctgcgacaaccgccgaagacaccaac
aacgcagtcaacaacgtgcgtgagcagctcaaccagatcaagaaccccatcgataaacac
ggtccgaccaacggcctacccccagttaaagaacaccccaaccactatcactacgaggac
aagaactctcttaccaacgccaaaattagaacaaacaactcagacgtgggtagccaccat
tcggatgacgaggagtctgagaagaggcttcagaaggctaggttccccaggcagacgccg
tatactctagtggaccgggaagagcggagcccacagccactcagcacggccggcaaacac
cccaactggactaacaaacaggataacagagacttggagtcgacgcagagcttaaaccga
atggaattcattgtatag
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