Oncorhynchus kisutch (coho salmon): 109890035
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Entry
109890035 CDS
T09179
Name
(RefSeq) atlastin-2 isoform X3
KO
K17339
atlastin [EC:3.6.5.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109890035
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
109890035
Autophagy
ER-phagy
ER-phagy recepters
109890035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
Motif
Other DBs
NCBI-GeneID:
109890035
NCBI-ProteinID:
XP_020337586
Ensembl:
ENSOKIG00005020388
LinkDB
All DBs
Position
LG4:complement(78190568..78213703)
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AA seq
615 aa
AA seq
DB search
MAEVSGLRKRNHFEQNRKRHVFDEGAGGVEDVPLSLPDRKPPPRMAPRAEADSETDEEWE
QAPELTAAYQSPVKEQPVEEVVVEEKARPIQIVLAHEDDHKFELDTAALEKLLLQEDVRD
LNVVVVSVAGAFRKGKSFLLDFMLRYMLNQQQQQSDSWVGADDEPLTGFSWRGGCERETT
GIQVWSQVFVVNKPDGSKVAVLLVDTQGAFDSQSTIKDCATVFALSTMTSSVQVYNLSQN
IQEDDLQHLQLFTEYGRLALEEIYLKPFQSLMFLIRDWSYPYEHNYGLEGGKRFLEKRLQ
VKQNQHEELQTVRKHIHSCFSNIGCFLLPHPGLKVATNPMFDGRLKDIDGDFKEALGNLV
PLLLAPENLVEKEIGGAKVTCRDLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLTAVA
GGKDTYSKSMEMVCGGDKPYIAPADLERCHEEFKECSVRQFRSVKKMGGEDFCKKYQEQL
EGELDEAYSNFHKHNEGKNIFYAARTPATLFVVMFTTYIVSGLTGFIGMNTIAVLANLVM
GVALITLCMWAYVKYSGEFRDVGTIIDLLAETLWEQVLKPLSAQYMEDNVRQTVVNSIRA
SLTEQATQHAKLKSH
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggttagcgggctgaggaaacggaatcatttcgaacaaaaccgcaaaagacac
gtctttgacgaaggtgcgggtggtgtggaagatgttcctctgtccctgccagatcggaag
cctcctcccaggatggcgcctcgggcagaggcggatagcgagacagacgaggagtgggaa
caggccccagagctgactgctgcctatcagagtcctgtcaaggagcaacctgtagaagag
gtggtggtggaggagaaggctcggcccatccagattgtcctggctcacgaagacgaccac
aaatttgagctggacacggcggctctggagaagctcttactgcaggaggatgtcagagac
cttaatgtggtggtggtgtcagtggctggggccttccgtaagggcaagtccttcctgctg
gatttcatgctccgatacatgctcaaccagcagcagcagcagtcagactcatgggttggg
gctgatgatgagccactgacagggttcagctggagaggaggctgtgagagggagaccaca
gggatccaggtctggagtcaggtgtttgtggtcaacaagccggatgggagcaaggttgct
gttctgctagtggatacacaaggagccttcgacagccagtctaccataaaggactgtgca
acggtttttgccttgagcaccatgaccagctctgtacaggtgtataacttgtcccagaat
attcaggaggatgatcttcagcatctccagctcttcacagaatacggccggcttgctttg
gaggaaatctatctaaaacccttccagtctctcatgttcctcatcagagactggagctat
ccatatgagcacaactatggactggagggaggtaaacgctttctagagaagagactgcag
gtgaaacagaaccagcacgaggaactgcagaccgtgaggaaacacatccactcctgcttc
tccaacatcggttgcttcctactgccccaccccggcctcaaagtggccaccaaccccatg
tttgacggcagattaaaagacattgatggtgactttaaggaggcactgggtaatctggtg
cccttactgctggctcctgagaacctggtggagaaggagattggaggggctaaagtgacc
tgcagagatctagtggagtactttaaggcctatataaagatctatcaaggggaggagctt
cctcatcctaaatcaatgttacaggcaacggctgaagccaacaaccttacagcagttgct
ggaggaaaagacacttacagcaaaagcatggaaatggtgtgtggaggggacaagccctac
atcgcccctgcagacttggaacgctgccacgaggagttcaaggagtgctcggtgcgtcag
ttccgctctgtgaagaagatgggaggggaggacttctgcaagaaataccaggagcagctg
gagggcgagctggatgaggcctattccaacttccataagcacaacgagggcaagaacatc
ttctacgctgcacgcacacccgccacgctcttcgttgtcatgttcaccacctacatcgtc
tcagggctgaccggcttcattggaatgaacactattgccgtgctggccaacctggtcatg
ggcgtggctctcataactctctgcatgtgggcctacgtcaaatactcaggggagttcaga
gatgtgggcaccatcatagacctgttggcagagacactctgggaacaggtgttgaagcca
ctgagtgcacaatatatggaggataacgttagacagactgtggttaactccatcagagcc
agtctgacggaacaagccacacagcacgcaaaattaaagtcacactga
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