Oncorhynchus kisutch (coho salmon): 109890036
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Entry
109890036 CDS
T09179
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like isoform X3
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109890036
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
109890036
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_3
Motif
Other DBs
NCBI-GeneID:
109890036
NCBI-ProteinID:
XP_020337589
Ensembl:
ENSOKIG00005020737
LinkDB
All DBs
Position
LG4:complement(78227139..78293686)
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AA seq
547 aa
AA seq
DB search
MSLVEEYEEGEYGRAPKRLKTAEVEEGEELEEGEDSDSESAGLLGDVENVGAEKKALWTT
TKYGPARRDSGEDSHRIAQSPVVHVRGLCEAVVEADLVEALEKFGPICYVMMMPFKRQAL
VEFEMVESADKCVACGSSEAVYIAGQQAFFNYSTSKRITRPTNSDNPNSGNKVLLLSIQN
PLYPITTDVLYTVCNPIGSVMRIVIFKRNGIQAMVEFESIECAQKAKAALNGADIYAGCC
TLKIEYARPTRLNVIRNDNESWDYTKPYLVRRDVSERGKGRQAILGEHPSSYGDNGYGSH
CPLLPLPGNSRYKLSSHDIPEVVAYPLPQSSSYNNHGSSSVAMVSGLHPTKMNCTRIFNL
FCLYGNIEKVKFMKSVPGTALVEMGDEYAVDRAITHLNSIKVFGKRLNVCVSKQHAVIPS
QVFELEDGSSSYKDFAMTRNNRFTSQGQASKNIIQPPSCVLHYYNVPPCISEDQLLRLCS
EHDVPGFTKFKMFDAKPSSKTISGLLEFDSKTHAVEVLTVLNHYQIRIPNGSNPYTLKLC
FSTSSHL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttgttgaagaatacgaggaaggggagtatgggagagcgccgaagcgactgaag
acggcagaggtggaggagggcgaggagctggaggagggagaggactcagactcggagtct
gcagggctgctcggagatgtagagaatgtaggagccgagaaaaaagccctgtggaccaca
acgaaatacggacctgcaagacgggacagtggggaggactcccacaggattgcacagtcc
ccagtcgtccatgtcagggggctgtgtgaggctgtggtggaggctgacctggtggaggcc
ctggagaagtttggacccatatgctatgtgatgatgatgccctttaagcggcaggcgctg
gtggagtttgagatggtggagagtgctgataagtgtgtggcgtgtgggagtagcgaggcc
gtctacatcgcaggccagcaggccttcttcaactactccaccagcaagaggatcactcgc
cccaccaactcagacaaccccaacagtggcaacaaagtcctgctcctgtctatccagaat
cccctctaccccatcaccacggacgttctctacaccgtctgcaaccccatcggcagtgtg
atgcgcatcgtcatcttcaaacgcaacggcatccaggccatggtggaatttgagtccatc
gagtgtgctcagaaagctaaggctgctctcaatggagccgacatctatgccggctgctgc
accttaaaaatcgaatatgcaaggccaactcgcttgaacgtgatcagaaatgacaacgag
agctgggactacacaaagccttacctggtccgaagagatgtttcagagcgtgggaagggc
aggcaggccatactgggggagcacccgtcctcttacggagacaatggatacgggtcacac
tgccccctgctgcctctcccagggaacagcaggtacaagctgagctcccacgacatccca
gaggtggtggcttaccccctgccccaaagctcctcctacaacaaccacggctctagctct
gtcgccatggtgagcggcctgcaccccaccaagatgaactgcacccgcatcttcaacctt
ttctgtctctatggcaacatcgaaaaggtgaagttcatgaagagtgtcccgggcactgcc
ctagtagagatgggggatgagtatgcagtggacagggccatcactcacctcaacagcatc
aaggtgtttggcaagcggcttaatgtctgtgtgtccaagcagcatgcggtcatacccagt
caggtgtttgaactggaggacggcagcagcagctataaggactttgccatgaccaggaac
aaccgcttcaccagccaaggccaggcctccaagaacatcatccagccaccctcctgtgtg
ttgcactactacaacgttcctccctgcatctcagaggaccagctactgaggctatgctca
gagcatgatgtgccgggtttcaccaagttcaagatgtttgatgcaaagccctcctccaaa
actatctctgggttgttagaatttgactccaagacgcacgcggttgaggtcttgaccgtc
ctaaaccactaccagatcagaataccaaatggctctaacccctacaccctgaagctgtgc
ttctccacttcctctcacctctga
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