Oncorhynchus kisutch (coho salmon): 109890174
Help
Entry
109890174 CDS
T09179
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oki00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
oki01100
Metabolic pathways
Module
oki_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
109890174
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
109890174
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109890174
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
109890174
Glycosyltransferases [BR:
oki01003
]
O-Glycan biosynthesis
Glycosaminoglycan
109890174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
109890174
NCBI-ProteinID:
XP_031687703
Ensembl:
ENSOKIG00005001138
LinkDB
All DBs
Position
LG1:71670249..71805063
Genome browser
AA seq
969 aa
AA seq
DB search
MVGGSCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEERENGGGGASNMREKRDR
VGGGGYKGSSEYMKREVQLQHHPPQGKGTVRHIQQPDGYYSHRPKEKVRVDSNNENSVPK
DFENIDNSNFGARSQPQRQPPGGADSNKRRERLQEKAHAEQATWKDNVPIFSRSSNEVLQ
YGRAVAQNGSLPVGPKAVGAGVGSRNHHSRSSQPQSQGQAQTYPQSQSHPQTQHRHQHQH
QTRKQATAAPLEVVYDQPPKCEISGKEAISALSRAKTKECRQQIAEVYCRHKEGQLMPEK
VTRYCPIEGKANANVAWEEDSSEGPPSAPVRIAFVLVVHGRASRQFQRLFKAIYHTSHYY
YIHIDQRSNYLHRQVQALASQYPNVRVTPWRMATIWGGASLLTMYLRSMADLITMTDWSW
DFFINLSAADYPIRTNSQLVAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMW
RLGDRKIPEGISVDGGSDWFLLNRPFVEYVINSQDDLVTNMKRFYTYTLLPAESFFHTVL
ENSAHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTSRPTFF
ARKFEASVNQEIVNQLDGYLFGPMPQGTPGLQAYWESAFDEADGVATLSDTQLTLYHAFA
RMGLARAAASLQGDPKDDSCRYFPMGHPVSVHLYFQSDQFQGYLVKHHATNLATSKLETL
ETWVMPRKTYKVASPPSTFTRLQFAEIGTEWDAKERMFRNFGGLMGPMDETVGMQRWSKG
PNVTGTVVWIDPTNVIAATYDILIDASAEYTHYRPPLNQPLRPGVWTIRVLHHWSPVAET
RFLISPLAYMKHQPIRQEDTLKLHNGPAKNSYMEQSFHGLNPVLNIPVHLGQVEQAKRNA
ALTGPALEHWVDGLVGAMWEAGDVCSTSMTGGPGTSCPVMQTCAKTPWSSLSPDPKSQLV
PPHADGRIR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggctcgtgcgctcgcaggttggcccgccgctcgcgttccgccttgatagcg
gctctcaccgtgctgctggtccagacgctgatagtgtggaacttcagtagcctcgattcc
ggggaagaacgggaaaacggcggcggtggcgcgtcgaacatgagggagaagagagaccgg
gtcggcggcggtggctacaaaggcagcagcgagtatatgaagcgcgaggttcagctacag
caccatcctccacaagggaaaggaacggttcgtcacatacagcagccggatggctactat
tcccaccgccccaaggagaaagtcagagtggacagcaacaatgagaactctgtgcccaaa
gactttgagaacatagacaatagtaactttggcgcccgttcgcagccccagcgccagcct
ccagggggcgctgacagtaacaaacgcagggagaggctgcaggagaaggcccatgccgaa
caggcaacctggaaggataacgttccaattttcagccggagctccaacgaggtcctccag
tacggacgagccgtagcccagaatggctcacttcctgtgggcccgaaagcggttggagcc
ggggtgggctccaggaaccaccacagccgctcttcacagccacagagccagggtcaggct
cagacttacccacagtcgcagtcccacccccagactcaacatagacaccaacatcagcat
caaaccaggaagcaggcgactgcggctccattggaggtcgtttacgaccagccgcccaag
tgtgagatcagtgggaaggaagcaatttcggctctgtccagagccaagaccaaggagtgc
cggcagcagatagctgaagtgtactgcagacacaaggagggtcaactgatgcctgagaag
gtcacccgctactgtcccatagagggtaaggccaatgccaacgtggcgtgggaggaggac
tcgtcagagggcccaccgtcggcccccgtcaggatagccttcgtcctggtggtccacggc
agagcctcacgacagttccagagacttttcaaggccatctaccacacctcacactactac
tatatacatatagaccagcgctccaactaccttcacagacaggtgcaggccctggcctcc
cagtaccccaatgtgagggtgacaccctggaggatggctaccatctggggcggtgccagc
ctgctcaccatgtacctccgcagcatggcagacctcatcaccatgaccgactggagctgg
gacttcttcatcaacctcagcgctgcagactaccccatcagaaccaacagccagctggtg
gccttcctgtccaagtacagagacatgaacttcatcaagtcccacggcagagacaacgcc
aggtttatccgcaaacaaggtctggaccggcttttctttgagtgcgacacccacatgtgg
cgacttggcgaccgcaaaatcccagaaggcatttctgtggacggcggttctgattggttc
ctgctcaatcgtccgttcgtggagtacgttataaactcccaagacgacctggtcaccaac
atgaagcgcttctatacctacacactgctgcccgccgagtcgttcttccatacggtgctg
gagaacagtgctcactgtgagagcatggttgacaacaacctgcgcatcacgaactggaac
aggaagctgggctgtaagtgtcagtacaaacacatagtggactggtgcggctgctccccc
aatgactttaaacctgccgactttcaccgcttccagcaaacgtcccgtcctacgttcttc
gccaggaagtttgaagccagtgttaaccaggagatagtgaaccaactagatggctacctg
tttggacccatgccccaggggacccctggcctccaggcctactgggagagtgcgtttgac
gaggcggatggggtcgcaaccctgagcgacacacagctcacactctaccatgcgtttgct
cgtatgggcctggccagggcggcagcatcgctgcaaggagatcctaaggatgacagctgc
aggtatttccccatgggccacccggtgtcagtgcatctctacttccagtcggaccagttc
caaggctacctggtcaagcaccatgccactaacctggcaaccagcaagctggagaccctg
gagacctgggtgatgcccaggaagacctacaaggtggcttcccctcccagcaccttcacc
aggctgcagttcgctgagatcggcacagagtgggatgccaaagagcgcatgttccgtaac
ttcggtggtctgatgggtcccatggacgagacagtcgggatgcagcggtggtccaagggc
cccaacgtgaccggcaccgtggtgtggatcgaccccaccaacgtcatcgctgccacctac
gatatcctgatcgacgccagcgcagagtacacccactacagaccccccctgaaccagcct
ctcaggcctggggtgtggaccatacgggtgttgcatcactggagccccgtggccgagaca
aggtttctgattagtccgctggcttatatgaagcatcagcctataagacaagaggacacg
ctgaagctccacaatggaccagccaagaacagttatatggagcagagcttccacggcctc
aaccccgtgctcaacatccctgtacacctgggtcaggtggagcaggctaagcgcaacgcc
gccctgactggccccgccttggagcactgggtagacggcctggtgggtgcgatgtgggag
gctggggacgtgtgttccacctccatgacagggggacctggaacatcctgccccgtcatg
cagacctgcgccaagaccccatggagctcgctcagcccggaccccaagtcccagctggtc
ccgccgcacgccgacgggcgcatcaggtag
DBGET
integrated database retrieval system
