Oncorhynchus kisutch (coho salmon): 109890178
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Entry
109890178 CDS
T09179
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109890178 (traip)
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109890178 (traip)
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109890178 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_11
zf-RING_Vps41
zf-C3HC4_4
zf-RING-like
Gp58
RING_XB3-XBAT31
WEMBL
zf-RING_16
Zn_ribbon_8
MAD
Uds1
Crescentin
Fez1
zf_RING_Vps8
KxDL
T3SSipB
RINGv
Aminoglyc_resit
Baculo_PEP_C
ATG14
zf-Nse
SLX1_C
AAA_13
Motif
Other DBs
NCBI-GeneID:
109890178
NCBI-ProteinID:
XP_020337742
Ensembl:
ENSOKIG00005000674
UniProt:
A0A8C7CAU2
LinkDB
All DBs
Position
LG5:34551151..34556184
Genome browser
AA seq
455 aa
AA seq
DB search
MPIRAYCTICSDFFDHSRDVAAIHCGHTFHYECLLQWFQTAPNKTCPQCRKQVSTRHIIN
KLFFDIGGEGEGSSADPECLQNELDRMKAVLSTKERDWRDRLKMVEGLKETVDRQKKDLD
IVRKEIGEKDMLCSVLRKQMKYLENQQSETQAAKEEARRLRTKMKTYESLDVVLQGQRAE
VESMISDMGVGQAAMEELSIYCISLKKEYENLKGSLRYSNEMSEKLKREVFASNNKLQKA
TMEMNRTNDDMKAVQNDLTNADKEITSLKKKVEILQKTLSTPTRTNEALSRLVFESPAPV
ALQQPRLHQPANSEDIDLNMTFDITTPDLVGKRASQVPSKKMRLDPATLSSTPSKHRDSA
SFGSKAREEEVPMGTFFRNSILFRKKTFGSMLDPQRSKLGAVRSGYDGLGGRTKFFQPSP
LSDIRPLMMKAKRKKVSRPAPPKISTCLTLDSYLE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcctattcgtgcctactgtaccatctgttcagatttcttcgatcactccagagatgtg
gctgccatccactgtgggcacaccttccactatgaatgtcttcttcagtggtttcagact
gcccccaacaagacatgtccacaatgtagaaaacaggttagcaccagacacattatcaac
aagttgttctttgacattggtggtgaaggagagggatcttctgcggatccagagtgtttg
cagaacgagctcgatagaatgaaagctgttttaagtaccaaagagagagactggagggac
agactgaagatggtagagggcttgaaggagactgtggacaggcagaagaaagacctggac
attgttaggaaggagattggcgagaaagatatgctctgctcagttctcaggaaacagatg
aaatacctggagaaccagcagagtgagactcaggctgctaaggaggaggcccgacgactc
aggaccaaaatgaaaacatatgagagtctggatgtggtgttacagggtcagagggctgag
gtggaatccatgatcagtgacatgggtgttggccaggctgccatggaggagctctccatc
tactgcatctctctcaagaaagaatatgagaatctaaaagggagcctcagatattcaaat
gaaatgtctgaaaagctcaaaagggaggtgtttgcttcaaacaacaagttgcagaaagcc
acaatggagatgaataggaccaatgatgacatgaaagctgtccaaaatgacttgaccaac
gcagacaaagagatcactagtctgaagaaaaaagttgagattcttcaaaagaccctgagc
acaccaacccgcactaacgaagccttgagccgactagtcttcgagagccctgccccagtg
gcgctgcaacagccccgtctccaccagcctgccaacagtgaggacattgaccttaacatg
acctttgacatcaccacacctgatctggtgggtaagagggcgtcacaggtcccatctaaa
aagatgcgtctggatccagccacgttgtcgtccacgccatccaaacaccgtgacagcgcc
tcgtttggaagcaaggccagagaggaggaggtgccaatgggtacattcttccgtaactcc
attctgttcaggaagaagacctttggcagcatgctggacccccagaggagtaaactggga
gctgtcagaagtggttatgatggacttggagggagaaccaaattcttccaaccttctcct
ttgtcagatattcgcccactcatgatgaaggcaaagagaaaaaaggtttcccgaccagct
cctcccaagatctccacctgtcttactctggacagttatctggagtga
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