Oncorhynchus kisutch (coho salmon): 109890209
Help
Entry
109890209 CDS
T09179
Symbol
pex6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
109890209 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109890209 (pex6)
Membrane trafficking [BR:
oki04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
109890209 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
DUF815
AAA_22
AAA_33
AAA_5
RuvB_N
TIP49
nSTAND3
RNA_helicase
AAA_7
Vps4_C
TsaE
AAA_25
Mg_chelatase
AAA_24
NPHP3_N
Parvo_NS1
IstB_IS21
AAA_28
AAA_14
AAA_2
Wza_C
Motif
Other DBs
NCBI-GeneID:
109890209
NCBI-ProteinID:
XP_020337786
Ensembl:
ENSOKIG00005025410
LinkDB
All DBs
Position
LG1:59942659..59957367
Genome browser
AA seq
1089 aa
AA seq
DB search
MAAQVELSCLDTFPTHLNPLHVLVIKSQFRYAFPSCNEPTSTLLFTSRKLQTLGKTAVLL
CAHSTEETSGWGSDGNDTTLKLYTSKIFLKHYGLQDDIRGVVRSLSPFSLRKVVIGARTR
QSFKWANSDKFSNGLLVLASCQGQPLLARQGDSLSLPYHPLLGDDISQVQHSLFDLVVLE
CTPITQGMITINTTVVVTDCRDIAQHGALETSNALATRNLTSLFVSDFAHYANSLGGGSS
LLDNRQVLDSSLSAFLQALECRLDVRIVDIRRLYGQGRIVLVEKGDAKIDLDSTVFVSKQ
LLLKLGLFNREWVVVSRFNCSSEMTKTSYRGESLPSPGQADDNAPGKEPSKGTEMVNLGS
VVVADFSKCAELDLQDNVGFISPTHWFNLSNGEPVPVSSRAVKIKRWNRVISQSGLQLSE
SLSRSASPLLAKELHIDAVISPEYSSHGPFDSILCEHFTIPRLVQLGGVLGIPSEGHPEV
LESNSEGITRWPVVYFKVKKVCGSTEEEDQGPYLADTVHTSLYMGGSTNSLAPCSLVGEE
PSLWTSLSPPGLSSTVDQFSTIIQPHMNESSAALMSGCTILLLGQSGSGKFSSVRAACRR
LHLHLVKVDCVTLCADTAASCEAKMKSVFQRAEAHRPCILLLRNLQLLGQPRDGAEEDAR
VIAALCQFIAHAPASVVVVAAVSKPRELSSDVMAAFIHQVSIESPSEEQRRAMLASLSEC
MPLGRDVNLARLAKHTAGFLLGDLSALLTQAGKSAHARILQSCFPEGASVQEEEDLCACG
VTVLAQDFTNALETLQDAHSQAIGAPKIPSVRWQDVGGLQQVKREILDTVQLPLERPELL
SLGLRRAGLLLYGPPGTGKTLLAKAVATECSMTFLSVKGPELINMYVGQSEENVREVFSK
ARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRP
DLLDQSLLRPGRFDKLVYVGINEDKESQLQVLKAIVRKFKVDPSVSLQDIVERCPPQLTG
ADIYALCSDAMMSAIKRKIARVTDGLDTEDTPLILSAEDFNQALDCLKPSVSEQELLKYK
LIQQKLTAK
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcaggtagaactgtcatgtttagatacatttccaacgcacttaaatccttta
cacgtgcttgttatcaagtcacaatttagatatgcgtttccaagttgcaatgagcctact
tcgacccttttattcacctcacggaagcttcagacactcgggaaaactgccgttttgctc
tgcgcgcactcaacagaggagacgtcaggttggggatcggatggaaacgacacaacttta
aaattgtacacaagtaagatctttctcaaacactatggtctccaggatgatataagggga
gttgtacgctcactatcaccgttttcccttcgaaaagttgttataggggcacgaacaaga
cagagtttcaagtgggcaaactcggataagttttccaatggacttctcgtactggcttcg
tgccaaggtcaaccactattggcacgacaaggggactcgctatcacttccctatcaccct
ttacttggagatgatatatctcaagtgcaacactctctgtttgacttagttgtgttggag
tgtacacctataacgcaggggatgataacaatcaacacaacagtggtggtcaccgactgc
cgagacattgcgcaacatggtgcactggagacctcgaatgctttggctactagaaatttg
acctcgctatttgtctctgattttgcacactacgcgaatagtcttggcgggggaagctct
ttacttgacaacaggcaagtattggactcgagtttatccgcttttttgcaagcactggag
tgtaggctggatgtcagaatcgtggatattcgtcgcttgtacggtcaagggagaattgta
ctagtggagaagggcgatgctaaaatcgatttagacagtactgttttcgtaagcaaacag
ttgctgctcaaactcgggttattcaaccgtgagtgggtagtggtgtctaggtttaactgc
tcatcagaaatgacaaagacgtcctacagaggcgagtccctgccaagtcccgggcaagcc
gatgataacgcacctggcaaagagccatctaagggcactgaaatggtcaacctcggctcg
gttgttgtggcagatttcagcaagtgtgcagagttggaccttcaagacaacgttggcttc
atatcgccgactcattggttcaacttgtcgaacggagagccagtgccagtcagtagcagg
gctgtgaaaataaagagatggaaccgggtcatttctcagtcaggtcttcagctttctgag
agcctctctcgatcagcatcaccgctgttagccaaagaactccacattgatgctgtcatc
tccccagaatacagttctcatggtccctttgacagtatcctctgtgagcactttaccata
ccaagacttgtgcagctgggcggtgttttgggcatcccatctgaagggcatcctgaagtc
ttggagagcaactctgagggaatcacaaggtggccggttgtgtatttcaaagtgaaaaag
gtttgtggctctacagaggaggaagaccaaggtccttaccttgcagacactgtccacaca
tctctatacatgggcggctccaccaatagcctggctccctgttcccttgttggcgaggag
ccttccctctggactagcttgtctccccctgggctctccagcaccgtggaccaattctcc
actatcatccagccccacatgaatgaaagctctgctgctctgatgagcggctgcaccatc
ctcctcctgggacagagtggcagtggaaaattcagctctgtcagagctgcatgccgtaga
ctccatctgcacttagtgaaggtggactgcgtgaccctctgcgccgacacagccgcctcc
tgtgaggcgaagatgaagtctgtcttccagcgagctgaggcccaccggccgtgcatcctg
ctgctcaggaacctgcagttgctgggccagcccagggatggcgccgaggaggatgccagg
gtcatagccgccctgtgccagttcattgcccacgcccctgccagcgtggtcgtggtggcg
gctgtaagtaaaccccgggagctgtcgtctgacgtgatggcagccttcatccaccaggtg
tcgatagagagccccagtgaggagcagcgccgggccatgctggccagcctcagcgagtgc
atgcccctgggaagggacgtcaacctggccaggctggccaagcacactgcgggctttcta
ttgggggacctcagtgcactgctgactcaggctggtaaatccgcccacgcaaggatactc
caatcctgtttcccagagggggccagtgtgcaggaggaagaggacctctgtgcctgtggg
gtaaccgtcctggcccaggacttcaccaatgccttggagaccctccaagacgcccactct
caggccatcggagccccgaagatccccagtgtgcgctggcaggacgttggcggcctgcag
caggtgaagcgggagatcctggacacggtgcagctgcccttggagaggcccgagctgctg
tccctgggcctgcgccgcgccggcctgctcctctacgggcctcccggcacgggcaagacc
ctgctggccaaggctgtggctacagagtgctccatgaccttcctcagtgtcaaaggcccg
gaactcatcaacatgtacgtgggtcaaagcgaggagaacgtgagagaggttttctccaaa
gctcgagcggcggccccttgtatcatcttctttgacgagctggactctctagcgcccaac
agagggcgcagtggagactctggtggagtcatggacagggtggtctctcagctcctggct
gagcttgacggacttcactcctctggggacgtgtttgtgattggagccaccaaccggcca
gacctgctcgatcaatcattgctcagacctggcaggtttgacaaattggtgtatgttggg
atcaatgaagacaaagagtctcagctgcaagttctgaaggccatagtcagaaagttcaag
gtggaccccagcgtcagtctccaggatatagtggaacgctgccctcctcagctcacaggg
gcggacatatatgctctctgctctgacgccatgatgtctgccattaagaggaagattgca
cgtgtcaccgacggtctggacaccgaggatactcctctcatactctctgccgaagacttt
aaccaagcattggattgcctcaaaccgtccgtctctgaacaagagctgctcaaatataaa
ctcattcagcagaaactcactgcaaaataa
DBGET
integrated database retrieval system
