Oncorhynchus kisutch (coho salmon): 109890265
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Entry
109890265 CDS
T09179
Name
(RefSeq) sodium/calcium exchanger 1-like isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04260
Cardiac muscle contraction
oki04261
Adrenergic signaling in cardiomyocytes
oki04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
109890265
04020 Calcium signaling pathway
109890265
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
109890265
04261 Adrenergic signaling in cardiomyocytes
109890265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109890265
00536 Glycosaminoglycan binding proteins [BR:
oki00536
]
109890265
Transporters [BR:
oki02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
109890265
Glycosaminoglycan binding proteins [BR:
oki00536
]
Heparan sulfate / Heparin
Others
109890265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
109890265
NCBI-ProteinID:
XP_020337845
Ensembl:
ENSOKIG00005024955
LinkDB
All DBs
Position
LG1:complement(59665828..59715522)
Genome browser
AA seq
973 aa
AA seq
DB search
MGQTGTSSFLFCTLQLTVLLAVFSSEITFVTAVNSNPSLGTNSSIGNQTNKKCDSLGTEC
KVGVILPIWLPENPSFGDKLARATVYFVALFYMFLGVSIIADRFMASIEVITSQEREITI
KKPNGEKVTTTVHVWNETVSNLTLMALGSSAPEILLSVVEVCGHNFDAGDLGPNTIVGSA
AFNMFVIIGLCVSVIPDGEHRKVKHLRVFFVTATWSIFAYTWLYLILAVISPGIVQVWEG
LVTLFFFPLCVGMAYIADRRLLVYKYMYKRYRAGKRRGVIIETEGEAQLPSKMDIEMDGK
MLNSEGFMDVAMGFDAKDLDEEEARKEMARILKELKQKHPEKETEQLIELANYQVLTQQQ
KSRAFYRCQATRIMTGAGNVLKKHAADQARKAVGAYEIRSDVSENDFSSKIFFDPCTYQC
LENCGTVALNVVRLGGDLTNTVSVEYRTEDGTANAGSDYQFTEGVVVFKPGETEKEIRID
IIDDDIFEEDEHFLVHLSNVKVISEGTGYGQPRANHVDTLAGLGLPCSATVTIFDDDHAG
IFTFEEPVMTVSESIGMMEVKVLRTSGARGLVVVPYKTIEGTAKGGGEDFEDMHGALEFQ
NDEIFKTIQINIIDDEEYEKNKNFFLEMGEPQLLEMSERKAVLLQEIGGFVKTDKRLYGR
DVYRKVQGRDNPVPATIISIADEGDEEALSKKEEEERRIAEMGRPTLGEHVKLEVVIEES
YEFKNTVDKLIKKTNLALLIGTNSWRQQFMEAITVSSGDDDEDECGEEKLPSCFDYVMHF
LTVFWKLLFAFVPPTDYWNGWACFVVSISMIGLLTAFIGDLASHFGCTVGLKDSVTAVVF
VALGTSVPDTFASKVAAIQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHNSKGNDF
RVDPGTLAFSVTLFTIFAFVAVAVLMYRRRPEIGGELGGPRGPKIATTCLFFSLWLMYIV
FSSLEAYCHIKGF
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaactgggacatcatctttcctcttctgcactcttcaactcacagtgttgttg
gcagttttttcatctgaaattacatttgttacagcggtgaattcaaacccaagcctcgga
acaaactcttccattggcaaccagactaacaagaagtgtgattcactgggtactgaatgc
aaagtgggtgtcattctgcccatatggttaccagagaacccatcctttggagataaactg
gcaagagccacagtttactttgtggccttgttttacatgttcctgggggtctctatcatt
gcggatcgcttcatggcatccatcgaggtaattacatcacaagagagggagatcaccatc
aagaaaccaaatggtgaaaaagtgacaaccactgtgcatgtatggaacgagacagtgtcc
aacctgacccttatggccctgggttcctccgccccggagatcctactgtccgtcgttgag
gtgtgcggtcacaactttgacgcaggtgatctgggcccgaacaccatcgttggtagtgct
gccttcaacatgttcgttatcattggactctgtgtttctgtcattcccgatggagagcac
cggaaagtcaaacatttgagggtattttttgttaccgccacctggagtatattcgcgtac
acctggctttatctcatcttggctgtcatctcaccgggcatcgtacaggtgtgggagggc
cttgtcacactgttttttttcccgttgtgtgtagggatggcttacattgcggatcgcaga
cttcttgtctataagtacatgtacaagcgctaccgcgcagggaagcgtaggggggtgatc
attgagacggaaggggaggctcaacttccttcaaagatggacattgaaatggatgggaaa
atgctcaactcagagggcttcatggacgtagcgatgggttttgatgcgaaggacctggat
gaggaggaggccaggaaggaaatggcccggatcctgaaggaactgaagcagaagcatcca
gagaaggagacggagcagctgatagaactcgccaactaccaggtattgacacaacagcaa
aagagtcgcgctttctaccgatgccaggctaccaggatcatgacgggagcagggaatgta
ctgaagaagcatgcagcagaccaagccaggaaagctgttggtgcgtacgagatccgctcc
gatgtttcggagaatgacttttcgtcaaagatcttttttgacccctgtacataccagtgc
ttggagaactgcggtacagtggccttgaatgtagtacgccttggtggggacttgactaac
actgtttcagtggaataccgtaccgaagacggcacagccaatgctggctcggactaccag
ttcactgagggcgttgtggtgtttaaacctggtgagactgagaaggagatccggatagac
attattgacgatgacatctttgaggaggatgagcattttctggtccaccttagcaatgtg
aaggtcatatccgagggcactggctacggacaaccaagggctaatcacgtggacactttg
gcgggccttggcctgccctgctcagccactgtgacgatctttgacgatgaccatgccggg
atctttacttttgaagaaccggtaatgaccgtgagcgagagtatcggcatgatggaagta
aaggttcttcgtacctcaggagcgcggggactagtggtcgtaccctacaagaccattgag
ggtacagcaaaaggagggggagaagactttgaagatatgcacggagcgctggaattccag
aacgatgagatcttcaaaactatacagatcaatataatcgatgacgaggaatatgagaaa
aacaagaacttcttccttgagatgggagagcctcagctgctggagatgagtgagaggaaa
gctgtgttgcttcaagaaattggtggattcgtgaagacagacaaaaggctttatggcagg
gacgtctaccggaaagtgcagggtagggataaccctgtccccgccaccattatcagcatt
gcagatgaaggggacgaggaagctctctccaagaaggaggaggaggaacgccgcatcgct
gagatgggccggcctaccctcggggagcacgtcaaactggaagttgtcatcgaggagtcg
tatgagttcaagaacacagtggataagctgattaagaagaccaacttggctctattgatt
ggaaccaatagctggaggcagcagtttatggaagctatcacagtcagctctggcgatgat
gatgaggacgagtgcggcgaggagaagctgccctcctgctttgattacgtcatgcacttt
ctcaccgtcttctggaagctcctgtttgcctttgtgccgcccaccgactactggaacggc
tgggcctgcttcgtggtctccatcagtatgattggcctgctcaccgccttcattggagac
ctggcctcccactttggctgtaccgtgggcctcaaggactccgtgaccgccgtggtgttt
gtggcgctcgggacgtctgtgccagacacgtttgccagcaaggtagctgcaatccaggac
cagtacgccgacgcctccatcggcaacgtaacgggcagcaatgccgtcaacgtcttcttg
gggatcggcgtggcctggtccatcgccgccatctaccacaattccaagggaaacgacttc
cgggtggatccgggcaccctggccttctccgtcaccctattcaccatcttcgcctttgtc
gccgtggccgtgctgatgtaccggcgccggcctgagattgggggcgagctgggtgggccc
cggggccccaaaatcgcgaccacctgtctcttcttcagcctgtggctcatgtacatcgta
ttctcctccctggaagcttattgccacatcaagggcttctaa
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