Oncorhynchus kisutch (coho salmon): 109890362
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Entry
109890362 CDS
T09179
Name
(RefSeq) guanine nucleotide exchange factor DBS-like isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109890362
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109890362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
hSH3
SH3_2
CRAL_TRIO
PH_10
Motif
Other DBs
NCBI-GeneID:
109890362
NCBI-ProteinID:
XP_031680003
Ensembl:
ENSOKIG00005016350
LinkDB
All DBs
Position
LG5:complement(3885246..3952472)
Genome browser
AA seq
1235 aa
AA seq
DB search
MRTGESDENMKEKEEKMGARDEMEVRLQSSGHGRGGGGCVHISLEEVKSFYRFSQSCQRL
HNDIMQQESDRLFAADIDPDLRKRFAFLSGGRAENGSPIIVFPEFPAFGELQEEEFHNVL
TYLTSVPSVTASGVGFILVIDRRQDRWTAVKGTLLRIAGSFPVHLQLVLVLRPSTLFQRT
LSDIFFKFNRDEFKMKVPVVMLSSVTELHAYIDRTQLPQELGGTQDYCHDTWISHRTAIE
AFALMVKTTAQTLQSFGTELAETELPNDAQATSNLLATHTEKKGQMKEDLCVALGQGGRL
LESINEPLQREPDYKMNQDELENLATVQRLLGQLDETETAFDDFWERHQTKLEQCLQLRH
FEYYFREVRAQLDVVSERVEAFSEVGISPAHAEHILRELNSQEEKACDVLDWALSLAAEG
DGLIESAHYAEDSILPKCSELRAVCDEVTSFLKTKKVLLLRAMELHHCLEKASRWCEEGI
YLLASQPVDRCQSQDGAEAALQELEKYLDTAAQHQITDLKSIWRDYDSILNPELREQVEK
VFQKQVSMQEMFEKRRVSLKKLAAKQTRPVQPVAPRPEAIIKFPMSPPAHRSQESRNADD
NILNVENCRIVEVQVQNDGSRHGSLSEEEENLAVLRRHVMNELLETERAYVEELLCVLQG
YAAEMDNPAMAHLLPSALLNRKDVLFGNMPEIYQFHKRTFLRELETYTDVPELVGRCFLE
RMGDLQIYEKYCQNKPRSESLWRQCSDCAFFQECQRKLEHKLGLDSYLLKPVQRITKYQL
ILKELLKYSKGCEGSEDLQEALSSILGILKAVNDSMHLIAITGYEGSLTELGRLLMQGSF
NVWTEHKKGHAKVKDLARFKPMQRHLFLHEKALLFCKRREENGEGYEKAPSYSFKHSLNM
SVVGITESAKGDNKKFEIWCNSREEVFIVQAATPEIKTSWLNEIRKVLTGQLKACRESSQ
KKASDTMSPSPTSNSPPIGLSPFRNCQKSVKKGEEKKTDAVNSDPNSPSSPKYKEETVTS
PTTDRASVAKKRFTLQGFSHLKSQKGSLLSPDHKAKSHEIKSDPTPFGCKEPGQTPHITL
SRAKWLSTSSLLQAKRRGWNKASFSMDVPEVQDGYSSAEDPMNSDPEDEGGRKLAVGDRF
TVVADYEKEKGGPQDLSVKSGDMVQLIKEGDDGQWFVRNLGSNKDGWVAAANLLTLITEF
KSSQSLCSSEGSVTGNLSTSSSCSETYTSFSDIKP
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgggagagagtgatgagaatatgaaggaaaaagaggagaagatgggagcgagg
gatgagatggaggtgcgcttgcagtccagcggacacggaagaggaggaggaggatgtgtc
cacatctctctggaggaagtgaagagcttctaccggttctcacagagctgtcagcgcctg
cataatgacatcatgcagcaggagagtgatcgtctgtttgctgcagacattgatcctgac
ctcaggaaacggtttgctttcctctcagggggccgagctgagaacggcagtcccatcatc
gtgttcccagaattccctgcgtttggcgagctccaggaggaagagttccacaacgtgctg
acctacctgaccagtgtgcccagtgtgacagcgtctggagtgggcttcatcctggtcatc
gaccgccgccaggacagatggaccgccgtcaaggggaccctgctacgcattgcaggctca
ttcccagtacatttacagctggttctggtcttgcggccctccaccttattccagcggacg
ctctccgacatcttcttcaagttcaacagggatgagttcaagatgaaggtgccggtggtg
atgctgagctctgtgactgagctccatgcctacatcgaccggactcagctgccccaggag
ctgggaggaacccaggattactgccatgatacctggatctcacaccgcaccgctatcgag
gcctttgctctgatggtgaagaccacggcacagaccctgcagtcgtttgggacggagctg
gccgagaccgagctacccaacgacgcccaggccacgtccaacctgctggccacacacacc
gagaagaagggacagatgaaggaggacctgtgtgtggcactgggccagggaggccggctc
ctggagagcatcaatgagcccctgcagagagaacccgactataaaatgaaccaggacgag
ctggagaacctggccaccgtgcagagactgctgggccagctggatgagacagagacggcg
tttgatgatttctgggagagacaccagaccaagctggaacagtgtctgcagctccgccat
tttgaatactacttccgtgaggtgcgtgcccagctggatgtggtgtcagagcgggtagag
gcgttctcggaggttggcatcagtcccgcccatgcagaacacatcctacgagaactcaac
agccaggaggagaaagcctgtgatgtgttggactgggctctgtccctggccgctgagggg
gatgggctgattgagagtgctcactatgctgaggactccatcctgccaaagtgcagtgag
ctgagggccgtgtgtgatgaggtcacctccttcctcaagaccaagaaggtccttctcctg
agggccatggagctgcaccactgtctggagaaggcatcgaggtggtgtgaggaagggatc
tacctccttgcctcccagccggtagatagatgtcagtctcaagacggggcggaggccgcg
ctgcaggagctggagaagtacctggacacggccgcccaacaccagatcaccgacctcaag
tccatctggagggactatgactccatcctcaacccagagcttagggagcaggtggagaag
gtgtttcaaaagcaggtgtccatgcaggagatgtttgagaagaggagggtcagtctgaag
aagctggcagccaaacagacacggcccgttcagccagtggctcccaggcctgaagccatc
atcaagttccccatgtcccctcctgctcacaggagtcaagagtcaaggaatgcagacgac
aacatcttgaacgtagaaaactgcagaatagtggaggtccaggtgcagaacgatggcagc
agacacggctctctgtctgaggaggaggagaacctggctgtgctccgacgacatgtaatg
aacgagctgttggagactgagagggcgtacgtagaggagcttctctgtgtactgcagggt
tatgctgcagagatggacaacccagccatggctcacctcctccctagtgctctgctcaac
aggaaggatgtcctgtttggcaacatgccagagatctaccagttccacaagaggacattc
ctcagggagctggagacctacacagacgtccctgagctggtgggacgctgtttcctggag
aggatgggcgacctgcagatctatgagaagtactgtcagaacaaacctcgatccgagagc
ttgtggagacagtgctccgactgcgccttcttccaggagtgccagagaaagttggaacac
aaactggggttggactcgtacctcctcaagccagtccagaggataaccaaataccagctg
atactgaaggagttactgaagtacagtaagggctgtgagggttcagaggacctgcaggag
gcgctgtcctccatcctggggatcctgaaggccgtcaacgactccatgcacctcatcgcc
atcacaggatatgaggggagcctgacggagttgggcaggctgctgatgcaggggtcgttc
aacgtgtggacggaacacaagaaaggtcacgctaaggtcaaggacctggcccgctttaag
cccatgcagagacacctgttcctgcatgaaaaagccctgctcttctgtaagagacgggag
gagaatggggagggttacgagaaagccccgtcctacagctttaaacactccctcaacatg
agtgtggtgggcatcacggagagcgccaagggtgacaacaagaagtttgagatctggtgt
aattccagagaggaggtgtttatcgtccaggctgcgacacctgagatcaaaacatcttgg
ttgaacgagatcaggaaggttctgactggccagctgaaagcttgcagggaatctagtcaa
aagaaggcgtcagacacaatgtctcccagtccaaccagcaacagcccacctatcggtctc
agtccatttaggaactgtcagaagagcgtgaagaagggagaagagaagaagacagatgct
gtcaactctgaccctaactccccctcctccccaaaatacaaagaggagacagtcaccagt
cccaccactgacagggcatcagtggctaaaaagcgttttacccttcaaggcttcagccat
ctgaagagtcagaaaggatccctccttagtcctgaccataaggccaaaagccacgagatt
aagagtgacccaactccctttgggtgtaaagagcctggtcagactcctcacatcactctg
agcagggccaagtggctcagcacctctagtctcttacaggccaaaaggagaggttggaac
aaggcctctttctccatggacgtgccagaagtgcaggatgggtactccagcgccgaggac
cccatgaactctgaccctgaggatgagggaggcaggaagctggctgtcggcgacaggttc
acagtggtggcggactatgagaaggagaaaggagggcctcaggacctgtcagtaaagagt
ggagacatggtgcagctcattaaagagggagatgacggacagtggtttgttagaaacttg
gggagcaacaaagatggctgggtagcagcagccaaccttctcaccctcatcacagagttc
aagtcctcgcagtccctctgcagctcagagggcagtgtaactggcaacctcagcacctcc
tccagctgcagtgaaacctacacaagtttctctgacatcaagccctaa
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