Oncorhynchus kisutch (coho salmon): 109890398
Help
Entry
109890398 CDS
T09179
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109890398
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109890398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
zf-CCCH_4
zf-CCCH_2
23S_rRNA_IVP
Motif
Other DBs
NCBI-GeneID:
109890398
NCBI-ProteinID:
XP_031680165
LinkDB
All DBs
Position
LG5:6491493..6504461
Genome browser
AA seq
780 aa
AA seq
DB search
MGLKDHPEEDRAGSILDLGLVLEYLHIECSVSRQAGADTGPSMEPGEEEEEACEGSGSCS
LSTPGGKEGEVVGEESAGFDSDPEPARKSTCSNPAGGVSVSDLDGVPVPNTHQPLCRTPC
VDLGSEGPPDPPSGEPSSGEALREYQSKLEFALKLGYAEELVRLVLAKLGPYTLINDILG
ELVKLGRKVETNQQLTGSTASQPIPSSSCSSSSTCGYVEAVEAQQGRTDCPYQTDLLLGD
KDNLRPVVLDGSNVAMSHGNKEVFSCYGIQLAVDWFLERGHRDITVFVPSWKKEQSRPDA
LITDQDILRRLEKDKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLAS
EKPEWKKLIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPIMPEHKKQPCPYGKK
CTYGHKCKYYHPERSAQCQRSVADELRASAKTSATSTSAKGQASEAGLVKSHSVPNNVAM
GTKRGSAPKRQCDPSIRALSYGEAEDKLRHAEKCNSLSSSSGSSCCSGSVTLSPAPGGPP
SSALSDPQEQPPSLGRDTPYMTLPHPHPDPYSSSCDPPDLSYYSVTPAHSGLAARRNPES
HFPLDTDLRLLGSSDCVSSGCDSYGERASCLCCPGPLLDKYTHHQHHQHNRLYSQHSAPL
LEPHHPSPHASVLYGYYQSLARGHSFPHDEPPDPHLKRPLYPPPPSPPAPGRRRPLQLPW
RLPLCVPVRPLPCWLPSGPLPGQHAAGDPVRLPAVRTLSAAPQESLLLGSLLQPTPSVLL
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatccggaggaggatagagcaggcagcatccttgacctggggctg
gttttagagtacctccacatcgaatgctctgtcagcaggcaggctggcgccgatacaggg
cccagtatggagccgggcgaggaggaggaagaggcctgcgagggcagcggcagttgcagc
ttgtccacgcctggggggaaggagggggaggtggtgggggaggagagcgctgggtttgac
agtgacccggagccagcccgaaagagcacctgttctaacccggctggaggagtgtccgta
tctgatctagatggtgtgcctgttcccaacacccaccaacctctatgcaggactccctgt
gtggacctggggtccgaggggcctcctgaccctccgtcaggggagccttcatccggggaa
gccctgagggagtaccagtccaagctggagtttgctctgaagctgggctacgcagaggaa
ctggtgcggctggtgctggccaagctggggccgtacacgctcatcaacgacatactggga
gagctggtcaaactgggccgtaaggtcgagacaaaccaacagctgactgggtccacggct
tcacagcccatcccctcatcctcctgctcctcctcttccacctgtgggtatgtggaggca
gtggaggcgcagcaggggaggacagactgcccctatcagacagacctcctcctgggggac
aaggacaacctgcggcccgtcgtcctggacggtagcaacgtggcaatgagccatggcaat
aaggaggtgttctcctgctacggcatccagctggctgttgattggtttctggagcgaggt
caccgtgacatcactgtgtttgtgccttcctggaagaaagagcagtcccgccctgacgcc
ctcatcacagaccaggatattttacgtcgtctggagaaggacaagatcttggtgttcact
ccgtctcgtcgggtccagggtcgccgggtggtctgctatgacgaccgtttcattgtcaag
ctggcctacgagtccgacggcatcatcgtctccaacgacaactaccgcgacctggccagt
gagaagccagagtggaagaagttaattgacgagcggctgctcatgtactcgtttgtcaac
gacaagttcatgcctcctgatgaccctctaggtcgtcatggtcccagtctggagaacttc
ctgaggaaacgtcccatcatgccagagcacaagaagcagccctgtccttacggcaagaag
tgcacttacggccacaagtgtaagtactaccacccggagaggagtgcccagtgccagcgc
tcggtggcagacgagctgcgtgccagtgccaagacctctgccacctctactagcgccaag
ggccaggctagcgaggccgggctggtgaagagccacagcgtgcccaacaatgtagcgatg
ggtaccaagagaggttctgcccccaaaaggcagtgtgaccccagcatccgggcgctgtcc
tacggcgaggcagaggacaagctgagacacgctgagaaatgcaacagcctcagtagtagt
agtgggagtagttgttgtagtgggagtgttactctgtcccctgcccctggaggacccccc
tcctctgccctcagcgacccccaggaacaaccaccgagcctgggcagggacacaccctac
atgaccctgccgcacccccaccctgacccctactcctccagctgtgaccctccagatctg
agctactactcagtgacgccggcccactctggcctggcagcacggaggaatccggagtcc
cacttcccgctggacaccgatctgcgtctgctgggctcgtcagactgtgtcagcagcgga
tgcgactcgtacggagagcgagcctcctgtctgtgctgcccaggccctctgctggacaaa
tacacccaccatcagcaccatcaacacaaccgcctatactctcaacactctgcccccctg
ctcgagccacaccacccctccccccacgcctctgtcctctatggctattaccagagcctg
gcacggggccacagcttcccccatgacgagccccctgacccccacctgaagcgccctctg
taccccccccccccctcccctccagcaccaggccgtaggcgcccgctccagctgccctgg
agactacccctctgtgtcccagtccggcccctaccctgctggctcccctctgggccgctg
cctggccaacacgcggctggagaccctgtcagactcccggctgtacgaacgctctccgcc
gccccccaggaaagccttctcctgggatccctactgcagccaaccccctcagtcctgcta
tga
DBGET
integrated database retrieval system
