KEGG   Oncorhynchus kisutch (coho salmon): 109890424
Entry
109890424         CDS       T09179                                 
Name
(RefSeq) serum response factor isoform X1
  KO
K04378  serum response factor
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04010  MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109890424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oki03000]
    109890424
Transcription factors [BR:oki03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box responders to external signals
    109890424
SSDB
Motif
Pfam: SRF-TF
Other DBs
NCBI-GeneID: 109890424
NCBI-ProteinID: XP_020337959
Ensembl: ENSOKIG00005020648
LinkDB
Position
LG1:59220841..59248059
AA seq 529 aa
MLGGNGAGLGTRAGGARPGNGTGLTALQVNNPGTNMSGAEGGRFDDRIREYSAEVVYSGS
EPESDSGDDDDTMGSAGDRRGVKRERAEMEVAASTTSMGQPPGGYGGVTGGATGAKPGKK
TRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFAT
RKLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSEGDSCAEP
PKDMMKPTFTMANLAAGVNTQPTSTSSSSTSSSSVAMHLQNSIPATCWQVSAGINTHSAT
SSANGTVLKTSATSTSVMLPGGFTLMSGATLPPGTHTIPLSHLQALQGPLAQTSITTATA
GHTQQGQQTTLLRLPATVSLTGGGMGQQLQAIQVHPSSQQSSVSHSDLSHITSSSTVSLP
TTIVTSSVPSSMGGHMMYPGAHTVMYATPTTSLGDGSLTVLNTFPQTAHTQSHDPGAVSQ
VFLTGHPGTVQIPVSAVQLHPMLIGQQSSSSNLTELQVVNLDAHHSKDD
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgttggggggaaacggggcaggattaggtacaagagcagggggcgcacgacctggaaat
gggactgggttgacagctctgcaagttaataacccaggaacgaacatgagtggtgccgaa
ggtggaaggtttgacgaccgaatcagagaatactcagccgaggtggtgtacagcggctct
gaaccagagtccgactccggggatgatgatgataccatgggttcagccggggaccgaaga
ggggtgaaacgagagagagctgagatggaagtcgctgcatcgacgacgtctatggggcaa
cccccgggaggttatggtggtgtcacgggaggtgcaacaggggcaaagccaggcaagaaa
acccgcggacgagtcaagatcaaaatggaatttatagacaacaaacttcggcggtacaca
acttttagcaagaggaagactggcattatgaagaaggcctacgagctctccactctaacg
ggcacccaggtcctcctcctggtggccagcgagacgggccacgtctacacgtttgccacg
cgcaagctccagcccatgattaccagtgagacgggcaaggcgctcatccagacgtgcctc
aactcgcccgattcgccgccccgcaacgacccgtccaccgaccagcgcatgagcgccaca
ggcttcgaggagacggacctcacctaccaggtgtcggagggtgacagctgcgcggagccc
cccaaggacatgatgaagccgacgttcaccatggccaatctggctgccggtgtcaacacc
caacccacgtcgacctcctcatcctccacttcctcctcctctgtggccatgcacttgcag
aacagcatccctgccacctgctggcaggtctcggcgggcatcaatactcacagtgccacc
agcagtgccaacggcacggtgctgaagacctcggccacgtcaacgagcgtcatgctaccc
ggagggttcaccctcatgtccggcgcaacgcttccccctggcacgcacaccattcctctc
agtcacctgcaggccctccagggccccttggcccagaccagcatcaccaccgctaccgca
gggcacacacagcagggccagcagaccaccctgctccgcctacctgcaactgtctcgctc
acaggtggagggatgggccagcagctgcaggccattcaggttcaccccagcagtcagcag
agctctgtgagccacagtgacctctcccacatcacaagcagctccacggtgagcctcccc
accaccatcgtcacgtcctcggtgccctcatcgatgggtggtcacatgatgtaccccggc
gcccacactgtcatgtacgccacacctacgacctcgttgggcgacggcagtctgaccgtg
ctcaacaccttcccacagacagcccatacgcagtcccatgaccccggtgctgtatcgcag
gtgttcctcacaggacatcctgggacagttcagatccctgtgtcggcagtgcagctccac
ccgatgctgattggtcagcagtcaagcagcagcaacctcacagagcttcaagtggtcaac
ctggatgcccatcactcaaaggacgattga

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