Oncorhynchus kisutch (coho salmon): 109890424
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Entry
109890424 CDS
T09179
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109890424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109890424
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
109890424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
109890424
NCBI-ProteinID:
XP_020337959
Ensembl:
ENSOKIG00005020648
LinkDB
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Position
LG1:59220841..59248059
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AA seq
529 aa
AA seq
DB search
MLGGNGAGLGTRAGGARPGNGTGLTALQVNNPGTNMSGAEGGRFDDRIREYSAEVVYSGS
EPESDSGDDDDTMGSAGDRRGVKRERAEMEVAASTTSMGQPPGGYGGVTGGATGAKPGKK
TRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFAT
RKLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSEGDSCAEP
PKDMMKPTFTMANLAAGVNTQPTSTSSSSTSSSSVAMHLQNSIPATCWQVSAGINTHSAT
SSANGTVLKTSATSTSVMLPGGFTLMSGATLPPGTHTIPLSHLQALQGPLAQTSITTATA
GHTQQGQQTTLLRLPATVSLTGGGMGQQLQAIQVHPSSQQSSVSHSDLSHITSSSTVSLP
TTIVTSSVPSSMGGHMMYPGAHTVMYATPTTSLGDGSLTVLNTFPQTAHTQSHDPGAVSQ
VFLTGHPGTVQIPVSAVQLHPMLIGQQSSSSNLTELQVVNLDAHHSKDD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttggggggaaacggggcaggattaggtacaagagcagggggcgcacgacctggaaat
gggactgggttgacagctctgcaagttaataacccaggaacgaacatgagtggtgccgaa
ggtggaaggtttgacgaccgaatcagagaatactcagccgaggtggtgtacagcggctct
gaaccagagtccgactccggggatgatgatgataccatgggttcagccggggaccgaaga
ggggtgaaacgagagagagctgagatggaagtcgctgcatcgacgacgtctatggggcaa
cccccgggaggttatggtggtgtcacgggaggtgcaacaggggcaaagccaggcaagaaa
acccgcggacgagtcaagatcaaaatggaatttatagacaacaaacttcggcggtacaca
acttttagcaagaggaagactggcattatgaagaaggcctacgagctctccactctaacg
ggcacccaggtcctcctcctggtggccagcgagacgggccacgtctacacgtttgccacg
cgcaagctccagcccatgattaccagtgagacgggcaaggcgctcatccagacgtgcctc
aactcgcccgattcgccgccccgcaacgacccgtccaccgaccagcgcatgagcgccaca
ggcttcgaggagacggacctcacctaccaggtgtcggagggtgacagctgcgcggagccc
cccaaggacatgatgaagccgacgttcaccatggccaatctggctgccggtgtcaacacc
caacccacgtcgacctcctcatcctccacttcctcctcctctgtggccatgcacttgcag
aacagcatccctgccacctgctggcaggtctcggcgggcatcaatactcacagtgccacc
agcagtgccaacggcacggtgctgaagacctcggccacgtcaacgagcgtcatgctaccc
ggagggttcaccctcatgtccggcgcaacgcttccccctggcacgcacaccattcctctc
agtcacctgcaggccctccagggccccttggcccagaccagcatcaccaccgctaccgca
gggcacacacagcagggccagcagaccaccctgctccgcctacctgcaactgtctcgctc
acaggtggagggatgggccagcagctgcaggccattcaggttcaccccagcagtcagcag
agctctgtgagccacagtgacctctcccacatcacaagcagctccacggtgagcctcccc
accaccatcgtcacgtcctcggtgccctcatcgatgggtggtcacatgatgtaccccggc
gcccacactgtcatgtacgccacacctacgacctcgttgggcgacggcagtctgaccgtg
ctcaacaccttcccacagacagcccatacgcagtcccatgaccccggtgctgtatcgcag
gtgttcctcacaggacatcctgggacagttcagatccctgtgtcggcagtgcagctccac
ccgatgctgattggtcagcagtcaagcagcagcaacctcacagagcttcaagtggtcaac
ctggatgcccatcactcaaaggacgattga
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