Oncorhynchus kisutch (coho salmon): 109890454
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Entry
109890454 CDS
T09179
Symbol
gart
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3 isoform X1
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00230
Purine metabolism
oki00670
One carbon pool by folate
oki01100
Metabolic pathways
Module
oki_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
109890454 (gart)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
109890454 (gart)
Enzymes [BR:
oki01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
109890454 (gart)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
109890454 (gart)
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
109890454 (gart)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
RimK
Dala_Dala_lig_C
ATP-grasp_2
Motif
Other DBs
NCBI-GeneID:
109890454
NCBI-ProteinID:
XP_031680457
Ensembl:
ENSOKIG00005023156
LinkDB
All DBs
Position
LG5:complement(16021009..16045813)
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AA seq
1021 aa
AA seq
DB search
MAVRLLVIGSGGREHTLAWKLAQSPHIQQVLVAPGNAGTANCGKISNSEVSVSNHSILAQ
FCKEHSVGLVVVGPEVPLAAGMVDDLQAAGVPCFGPSAKAAQLEASKSFSKAFMDRHGIP
TANWCSFTDPQEACSYIRTASFPALVVKASGLAAGKGVIVAKDQEEACQAVLDIMKDKTF
GSAGETVVVEELLEGEEVSCLCFSDGCSVSPMPPAQDHKRLQDGDLGPNTGGMGAYCPTP
QVSQELLQQIRETVLQKTVDGMKEEGTPYVGVLYAGLMLTKQGLKVLEFNCRFGDPECQV
LMPLLKSDLYEVLQSTLEGKLASSPPEWHQDRSAVTVVMASPGYPGSYKKGVAITGLSQV
EETGVQVFHAGTSLKEGGVVSSGGRVLTVTAVRSSLEMALHAANRGVAAVGFPGAVYRSD
IGHRGIAHLTQHSRGLTYKDSGVDIAAGNRLVDMIKPFAKATSRSGCNAELGGFAGLFDL
KAAGFIDPILVSGTDGVGTKLTIAQACQQHSTLGQDLVAMCVNDVLAQGAEPLFFLDYFS
CGRLDVGVASAVIRGVAEACGLAGCALLGGETAEMPGVYGPGEYDLAGFCVGAVERGALL
PRLGDICEGDLLIGVASSGVHSNGFSLVRKVLERAGVTYSSPAPFGKPGQTVGEVLLTPT
KIYSRLLLPILRSGAIKAYAHITGGGLLENIPRVLPQELSVDLDASRWIIPPVFSWLQEE
GGLCEEEMGRTFNCGLGAVLVVAFPDAQSVLRKLQAHEDAWIVGSLAHKQPGAEPVVIRN
LKHSLRLGPSPCVVDLGPMQNGASQGDSSSTVPRKRTRVGVLISGTGTNLQALMEQTKRT
SSSAEIVVVISNQPGVLGLKRASLAGIQTRVVDHKLYGSRAEFDGTIDHVLEEFDVEVVC
LAGFMRILTGSFVRKWNGKLLNIHPSLLPSFKGVNAQKQALQAGARVSGCTVHFVAEEVD
AGAIIAQEAVPVLMNDTEESLSDRIREAEHRAFPAALELVAGGGVRLGDDGRIIWNPNAQ
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcggttgctggtgattggcagtggtgggcgggaacacaccttggcatggaag
ctggcacagtcaccacacatccagcaggtcctggtggcaccagggaacgctggcactgcc
aactgtggaaagatctccaactctgaggtgtctgtgagtaatcactccatcctggctcag
ttctgtaaggagcatagcgtggggctggtggtggtagggcccgaggtgcctctcgcagca
ggcatggtagatgacttgcaagcggccggagtcccgtgtttcggcccctcagcgaaggct
gcccagctggaggccagtaagagtttctccaaggcctttatggaccgtcacggcatcccc
acagccaactggtgctccttcaccgacccccaggaggcctgcagctacatccgcacggcc
agttttcctgctctggtggtgaaggccagcggcctggctgcagggaagggtgtcattgtg
gccaaggaccaggaggaggcctgccaggctgtgctggacataatgaaggacaaaacgttc
ggctctgccggggagactgtggtggtggaggaactactggagggagaagaagtgtcttgt
ctgtgtttcagtgatggctgcagtgtgtcccccatgcccccggcccaggaccacaaacgc
ctgcaggacggggacctgggccccaacacaggcggcatgggggcctactgccccaccccc
caggtgtctcaggagcttttgcagcagatcagagagactgtcctccagaagactgtggat
ggcatgaaggaggagggaaccccctatgtgggtgtgctgtatgctgggctgatgttgacc
aagcaggggctgaaggtcctggagtttaactgtcgcttcggcgacccagagtgtcaggtg
ctgatgcccttgctgaagagtgacttgtatgaggtgctccagagcaccctggaggggaag
ttggcatccagtccacctgagtggcaccaggacaggtctgcagttactgtggtcatggcc
agccctggctaccccggctcctataagaaaggtgtcgcaatcactggtctgtctcaggtg
gaggagacaggggtgcaggtgttccacgccggcacgtcgctgaaggaagggggtgttgtc
tccagcggggggcgtgtcctcactgtcaccgctgttaggtcgtctctggagatggccctg
cacgcagccaatcggggtgtggccgccgtgggtttcccgggagccgtgtaccgaagtgac
atcggtcaccgaggcatcgcccacctcacccagcacagcagaggcctaacttataaggac
agtggagtggacatcgccgcgggaaatcgactggtagacatgatcaagccatttgccaag
gccacctctcgctcagggtgtaacgccgagctggggggcttcgccgggctctttgatctc
aaagctgcaggcttcatcgaccccatcctggtgtctgggacagacggagtagggaccaag
ctcacgattgcccaggcatgccagcagcacagcaccctgggacaggacctggtggccatg
tgtgtcaacgacgtgctggcccagggggcggagcctctcttcttcctggactacttctcc
tgtggccgtctggatgtgggcgtggcctccgctgtgatcaggggcgtggccgaggcctgc
gggttggcgggctgtgctctgctgggcggggagactgcggagatgcctggcgtgtacggc
cccggcgagtacgacctggcagggttctgtgttggggcggtggagaggggcgccctgcta
cccaggctgggggatatctgcgagggggacctactcatcggggtggcctcctcgggggtg
cacagcaacggattcagcctggttcggaaggtcctggagagggcaggagtcacctacagc
tcccctgcacctttcgggaaacctggacaaaccgtgggcgaggttctcctgacgcctact
aagatctacagccgcctgctcctgccaatcttgcgcagcggcgccatcaaggcctatgcc
cacatcactgggggcggcctattggagaacatcccccgagtgctgcctcaggaactgtcg
gttgacctggacgcctcccgttggatcatccctcctgtgttctcatggctccaggaggag
gggggcttgtgcgaggaggagatggggcgcaccttcaactgtggccttggggccgtgctg
gtggtggcctttccggatgcccagagtgttctgaggaagctccaagcccacgaggatgcg
tggatcgtgggctcgctggcccacaagcagcctggggccgagccggtggtgatcaggaac
ctcaagcacagcctgcgtttaggcccctctccctgtgtagtagacctggggcccatgcag
aacggagcatctcaaggggacagcagtagcaccgtcccccgcaagaggaccagggtgggc
gtcctcatctcaggcacaggcaccaacctgcaggctctgatggagcagaccaagagaacg
tccagctcagcagagatcgtggtggtgatctccaaccagccgggggtcttgggcctcaaa
agggcctctctggctggcattcagacacgggtggttgaccataagctgtacggtagccgg
gcagagtttgacggcaccattgaccacgtgctggaggaatttgatgtggaggtggtgtgt
ctcgccggcttcatgaggatcctcacagggtccttcgtcaggaagtggaacggaaaactg
ctgaacatccatccgtccctgctgccctcattcaagggggttaatgcccagaagcaggct
ctgcaggcgggggcacgggtctctggctgcaccgtccactttgtggctgaagaggttgat
gccggggccatcattgctcaggaggcagtgccggtgttgatgaatgatactgaggagagt
ctatcagatcgcatccgggaggcagagcaccgggccttccctgccgccctggagctggtg
gccgggggtggcgtgaggctgggggatgacggacgcatcatttggaaccccaacgcacag
ggctaa
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