Oncorhynchus kisutch (coho salmon): 109890611
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Entry
109890611 CDS
T09179
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
oki04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109890611
04082 Neuroactive ligand signaling
109890611
04519 Cadherin signaling
109890611
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109890611
Ion channels [BR:
oki04040
]
Ligand-gated channels
GABA-A
109890611
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
109890611
NCBI-ProteinID:
XP_031680211
Ensembl:
ENSOKIG00005028726
LinkDB
All DBs
Position
LG5:complement(9330801..9388269)
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AA seq
539 aa
AA seq
DB search
MEPDETHRGMNMYLWWILLQGFWSVYGELPFIADNNAAMLVNWNAVDGNKKLFAIYDTSV
NEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYF
QQYWRDKRLAYLGIPLNLTLDNRVADSLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGT
VLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDNAVTGVTRIEL
PQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN
YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYAFVN
YIFFGRGPQMQKKLAEKAERANNERAAKYDTNRSPQEGGKTSSLKLTKQPNRAKTLRVSQ
SAESHGNILLTTLEIHNEVAGNEVTTSLADSRNSSVMGFDNTSTGTGVQCRKASRSSGPR
HSLDRHAQLKRHKLRRRSSQLKIKIPDLTDVNAIDRWSRIIFPSVFSLFNLIYWMYYVN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgatgagactcatagaggaatgaacatgtacctttggtggattttactgcaa
ggattctggagcgtttatggggaacttccatttattgcagacaataacgcagccatgttg
gtcaactggaatgcagtcgatggaaacaagaagttgtttgcaatctatgataccagcgtg
aatgaaccagggaacatgtcttttgtgaaagagacggtggacaaactactaaaaggatat
gatattcgtcttcgaccagactttggaggggcccctgttgcagttggcatgagtatagat
gtggcgagcatagacatggtatccgaagtcaacatggactacactttaaccatgtacttc
cagcagtactggagggacaagaggctggcgtacttagggatcccactgaacctcaccctg
gataaccgggtagcagattcactctgggtccctgacacctacttcctgaatgacaagaag
tccttcgtccacggtgtgacggtcaagaaccgcatgatccgcctccacccggatggaaca
gtgctctacggcctgaggatcacaaccacggcagcctgtatgatggacctgaggaggtac
cctctggacgagcagaactgcactctggagatcgagagctatggatacacaacagatgac
attgagttctactggaagggaggagacaatgcggtgacgggggtgacacgcattgagctg
ccacagttctccatagtggactacaagctggtgtccagaaatgttgtcttttccacaggt
gcctacccacgactgtctttgagcttcaagctaaagaggaacatcggctactttatcctg
cagacctacatgccctccatcctgatcaccatcttgtcctgggtctccttctggatcaat
tacgatgcctcggctgcaagagtggcattagggatcaccactgtgctcaccatgaccacc
atcaacacccatctgagagagacgctccccaagatcccctacgtcaaggccatcgacatg
tacctgatgggctgcttcgtcatggtcttcctggccctgctggagtacgccttcgtcaac
tacatcttcttcggccgaggaccacaaatgcagaagaagctggcagagaaagccgagagg
gccaacaatgagagggcggccaaatacgacaccaatcggtctcctcaggaaggaggtaaa
acgtcatctcttaagctgactaagcagcctaatagagcaaaaacgctccgtgtctcacag
tcggcggagtcccacggtaatatcctgctgaccaccctggagatccacaacgaggtggca
ggaaatgaggtcaccaccagcctggcggacagcaggaactcctccgtcatgggatttgac
aacaccagcacaggtaccggcgtccagtgcaggaaggcgagccggtcctcgggtcctcgc
cacagcctcgacaggcacgcccagctcaagaggcacaaactgcggcggcgctcgtcgcag
ctcaaaatcaaaatccctgacctgacggacgtaaacgccatcgacaggtggtcgcggatt
atcttcccctccgttttctccctctttaatctaatctactggatgtattatgtcaactga
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