Oncorhynchus kisutch (coho salmon): 109890618
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Entry
109890618 CDS
T09179
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109890618
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109890618
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109890618
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109890618
Intermediate filaments
Intermediate filament-binding proteins
109890618
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
109890618
NCBI-ProteinID:
XP_020338163
Ensembl:
ENSOKIG00005013246
LinkDB
All DBs
Position
LG1:58642136..58732258
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEYEHMEITQQYSSSDTVNNRWEDEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSGERLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEERV
QAVVSVAKELEAEKYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAIDG
DVYKPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSDESGKDLTGAVRLLSKHRTLEDEMNGRAGHLQHTIAEGQAMADGGHFGAAKIRDR
IADLRAQWAALEELAGVRKAHLEEACALHQFQADADDADAWTLDALRIVSSSEVGHDEFS
TQALVRKHKDAAAEVASYRPVIDALHEQAAALPEEQAQSEEVKGRLAGIEERYKEVAELT
RLRKQALQDALALYKMFSEADACEVWIDEKDQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKDIKAQQDKLNNRWSQFRDLADQKKESLISALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AERLAGEHPDQAKAITGRLAEITAVWEEMKATLRNREESLGEASKLQQFLRELDDFQSWL
SRTQTAIASEETPNTLAEAEKLLAQHDGIKNEICNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEVFLNNQEYMLAHTEMP
TTLEGAEGAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINADRIQERAASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGMQLVLEKPETESVVKEKLSALQKMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVEVRQREVVE
LQSQALVLSQEGKDTGEVDGQRQMVEHKFKELLDPLRKRKNFLVASREIHQFNRDVEDEI
LWVEERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSLA
VEAIRQRLADLQQLWGLMIEETEKRHVRLEEAHNAQKYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHPESERIGMRQSQVDKL
YAGMKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEILSRILDKHKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWNTLLEACDGRRVHLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLA
RKHYASEEIKDKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEPY
LFGRELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPSPEPLPEKDSPLQSGVENGLQNGLPSDQDSPQNGVDRVEIMNGVAEQNSKDPSPIPSP
TASRRGKGSLSSTLPTQNQDLPAAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNQEM
GFYKDNKAAGQGIPYHNAIPISLMGAVCDVAMDYKKKKHVFKLRVTDGNEYLFQAKEEEE
MSTWIQAILNAGTPDKVSITPSNQSTPASSRAQTLPATVTLTSESSPGKREKDKEKDKEK
RFSLFGKKKL
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtggccgcggaatatgagcacatggagatcacgcagcagtacagcagcagc
gacacggtcaacaaccgctgggaagatgagtgggacaacgagaacagctcagctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgagcgcgaagcggtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgagtgtcctgccgcatcaccgacctgtac
agggacctgagtgatggacgcatgctcatcaaactgctggaggtgctgtctggggagaga
ctgcccaagcccaccaggggacggatgcgtatccactgcctggagaacgtggacaaggct
ctgcagttcctcaaggagcagagggtccacctggaaaacatgggctcacacgacatcgtt
gacggcaaccaccgcctcaccctggggctcatctggaccatcattctcaggttccagatc
caggacatcagtgttgagactgatggagacaacaaggagaagagatcagccaaggatgcc
ctgctcctctggtgccagatgaagactgctggctatccaaacgtgaacattcacaatttc
agcaccagttggcgagacggcatggctttcaatgccctcatccataagcacaggccagac
ctgattgactttgacaagctgaaaaagtccaatgcccaccacaacctgcagaatgccttc
aatctggctgagcagcatcttgggcttaccaagctcctagacccagaggatatcagtgtg
gaccaccccgatgagaagtcggtcatcacatacgtggtgacgtactaccactacttctcc
aaaatgaaggcgctgaaagtggaggggaaacgtattgggaaggtactggacaatgccatt
gagacagagaagatgattgagaagtacgagtctctggcctcagacctgctggagtggatc
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaacggggtgcag
cagcagcttcaagccttcaacacatatcgcacggtcgagaaaccccctaagtttactgag
aagggcaacctggaggtgcttctgtttaccatccagagcaagatgcgggccaacaatcag
aaagtctacatgcccagggagggcaaactcatctctgacattaacaagacttgggagaga
ctggagaaggcggagcatgagcgggagctggctctgaggacagagctgattcgacaggag
aaactggagcagctggctcgccgctttgaccgcaaggctgccatgagggagacctggctg
agtgagaaccagcgcctcgtctcacaggacaactttggcttcgaccttccggcggtggac
gcggccaccaagaagcatgaggccatcgagacggatattacggcgtacgaggagcgtgtg
caggccgtggtgtctgtcgctaaggagctggaggcagagaagtaccacgacatcaaacgc
atcacagcgcgcaaggacaacgtgatccggctgtgggagtacctgctggagcttctgaag
gcgaggcgccagcgcctggagatgaatctgggtctgcagagggtcttccaggagatgctt
tacatcatggactggatggacgagatgaagatgatgctgctgtcccaggactatgggaag
catctgctcggagtggaagatctcctgcagaaacatgccctggtagaggccgacatcggc
atccaggctgaccgtgtcaaagctgtcaacaacaatgcccagaaattcgcaatcgacggc
gatgtttacaagccctgtgaccctcaggtaatacgcgaccgcgtggcccacatggagttc
tgctaccaggagctgacccagctggctgccgagcgccgggcccgcctggaggagtcccgc
cgtctctggaagttcttctgggagatggccgaggaggagggctggatccgtgagaaggag
cagatcctgtcgtcggacgagagcggcaaggacctgacgggggctgtgcgcctgttaagc
aagcaccgcaccctggaggacgagatgaatggccgtgccggtcacctgcagcacaccatc
gccgagggccaggccatggccgacggtggccacttcggcgccgccaagatccgcgaccgt
atcgccgacctgcgggcgcagtgggcagcattggaggagctggcgggcgtgaggaaggcc
catctggaggaagcgtgtgccctgcaccagttccaggcggacgcagacgatgccgacgcc
tggaccctggatgccctgcgcatcgtgtccagcagcgaggtgggccatgacgagttctct
acacaggccctggtgcgcaagcacaaggacgccgccgccgaggtggccagctatcggccg
gtgatcgatgcgctccatgagcaggcggccgccttgcctgaggagcaggctcagtcggaa
gaagtcaagggccgcctggcaggcatagaggagcgctacaaggaggtggccgagctgacc
cggctgagaaagcaggcactgcaggacgccctggccctctacaagatgttcagcgaggcg
gacgcctgcgaggtgtggattgatgagaaggatcagtggctcaacagcatggagatccca
gagaagctagaagacctagaggtcattcagcacaggttcgagagcctggagcctgagatg
aacaaccaggcgtcacgcgtcgctgtcgtgaaccagatcgccaggcagctgatgcacaac
ggacaccccagtgagaaggacataaaagcccagcaagataagctcaataacagatggagc
cagttccgagatctggcggaccagaagaaggagtctctaatctccgcactgggtgtgcag
aactaccacctggactgcaacgaaaccaagtcgtggatccgcgagaagacaaaggtcatc
gagtccacccaggagctgggcaacgacctgacgggtgtcatggcgctgcagcgcaaactc
actggcatggagcgtgacctggctgccatcgaggacaagctgggcgacctgcgtggcgag
gctgagcggctggccggcgagcacccagaccaggccaaggccatcacgggccgcctggcc
gagatcaccgctgtgtgggaggagatgaaggccacactgcgtaaccgcgaagagtccctt
ggcgaggccagcaagctgcagcagttcctgcgcgaactggatgacttccagtcgtggctg
tcgcgcacacagacagccattgcctcggaggagacgcccaacacgctggctgaggcagag
aagctgctagcacagcacgacggcatcaaaaacgagatctgcaactacgaagaggactac
cagaagatgcgcgacatgggcgagatggtgacccagggtcagaccgatgcccagtacatg
ttcctgaggcagcggctacaggcactggacacaggctggaacgagctgcacaagatgtgg
gagaaccggcagaacctgctgtcacagtcccacgcctaccagctgtttctcagggacacc
aagcaggccgaggtcttcctcaacaaccaggagtacatgctggcccatacagagatgccc
actacgcttgagggggccgaaggagccatcaagaagcaggaggacttcatgaccaccatg
gacgccaacgaagagaagataaacggcgtggtggaggctggcaggcggctggcgagcgac
ggcaacattaacgccgaccgcatccaggagagagcggcgtctattgacgacaggcataag
aagaaccgcgaggctgctgtggagctactgatgaggctgaaggataaccgggaccttcag
aagttcctacaggattgccaggagctgtctctgtggatcaatgagaagatgctcacggcc
caggacatgtcgtacgacgaggccaggaacctccacagcaaatggctcaagcatcaggcc
ttcatggccgagttgcagtccaacaaggagtggctggacaagattgagaaggatgggatg
cagctggtgttggagaagcctgagacagagtcggtggtcaaggagaagctctcagccctc
cagaagatgtgggaagagttggagtccaccacccagaccaaggcccagtgcctgtttgac
gccaacaaggccgagctgtttacacagagctgtgccgacctggacaagtggctgggtggc
ctggagggccagattcaatcggacgactacggcaaagacctgaccagcgtcaacatcctg
ctcaagaagcagcagatattggaaaaccaggtggaggtccgtcagagggaggtggtggag
ctgcagagccaggcgctggtcctcagccaggaagggaaggacacgggggaggtggatggc
cagagacaaatggtggagcacaagttcaaagagctgctggacccgctgaggaagagaaag
aacttcctggtggcctcccgcgagatccaccagttcaaccgcgatgtggaggacgagatt
ctgtgggtcgaagagaggatgccaattgcaacctccacggatcatggtcacaacctgcag
accgttcaactgcttatcaagaaaaatcagaccttgcagaaggagatccagggacaccag
ccccgcttcgatgacattttcgagcggagcgagagcctgctgatggaggacagccttgcc
gtggaggccatccgccagcgcctggccgacttgcaacagctgtggggcctgatgattgag
gagacggagaagcgtcacgtccgactggaggaggcccacaatgcacagaagtactacttt
gatgctgctgaggctgaggcctggatgagcgagcaggagttgtacatgatgtctgaggag
aaggccaaggatgagcagagctccgtagccatgctgaagaagcaccagattgtggagcag
tcggtggaggactacgctgagacagtccatcagctctccaagaccagcagaggcctgaca
gctgcaggacatccagagagtgagaggataggcatgcgtcagtctcaggtggacaagctc
tatgccggcatgaaggacctgtctgaggagaggcggggcaaactggatgagcggttccgc
ctgttccagctcaaccgcgaggttgacgacttggagcagtggattgccgagcgggaggtg
gtggccggatctcatgagctgggacaggactacgagcatgtcaccatgctccaggagcgc
ttccgggagtttgcgcgcgacacaggcaatatcggccaggagcgtgtggatgccgtcaac
cgcctggccgatgagctgataaatgcgggccacgcagatgccgccacggtggccgagtgg
aaagatggactcaacgaggcctgggctgacctgctggaacttatcgacacgcgcacgcag
atcctggccgcctcctacgagctgcacaagttctaccatgacgccaaggagatcctgagc
cgcatcctggacaaacacaagaaacttccagaggaggtgggacgtgaccagaacacagtg
gagacactgcagaggatgcacaccaccttcgagcatgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgccgtccgcctccagtcggcctatgccggcgacaaggca
gacgacatccagcggagggagagtgaggtgctggaggcctggaataccctgctggaggcc
tgtgatggccgcagggtccacctcctggacacgggcgacaaattccgcttcttcagcatg
gtgcgcgacctcatgctgtggatggaggacgtcatccgtctcatcgaagcccaggagaat
ccaagggacgtgtcctcagtggagttgttgatgaacaaccaccagggtatcaaggctgag
atcgacgcccgcaatgacagcttcaccgcctgcattgagttgggcaagtctctgctagcc
agaaagcactatgcatcagaggagatcaaagataagttactacagctgatggacaagagg
aaagacatgattgacaagtgggaggaccgacgggagtggttaagactgattttggaagtt
caccagtttgggagggatgcaggggtggcagaggcgtggctgctgggacaggaaccatac
ctattcggccgggagttggggcagagtgtggacgaggtggagaaactgatcaagaggcac
gaggcattcgagaagtcggccgccacttgggaggagcgcttctcagcactggagaggttg
actacgttggagttattggaagtgagaagacagcaagaggaagaagaaagaatgcgaaaa
cccccttcgccagagcctttaccggagaaagactcaccactgcagagtggagtagagaac
ggactgcagaatggactgccctcagaccaggattccccacagaatggtgtggacagagtt
gagatcatgaatggagtggcggagcagaactcaaaggaccccagccccattccctcaccc
acagccagccggcggggcaagggcagcctgtcctccacattgccgacccagaaccaggat
ttgcctgcagctcagctggagggcttcctgcatcgcaagcatgagtgggagggtcacaac
aagaaggcttcaagcagatcctggcataacgtgtactgcgttatcaacaatcaggaaatg
ggcttctacaaagacaacaaggctgctggtcaaggcatcccctaccacaatgcgattccg
atcagtctaatgggggctgtgtgtgatgtggccatggattacaaaaaaaagaaacatgtc
ttcaaactcagagttacggatggaaatgagtatctcttccaagccaaagaagaagaggag
atgagcacatggatccaggccattctgaatgcggggacacctgacaaggtatcgattacg
cccagcaaccagagcactccggcgtcaagccgagcccagaccctgcccgccaccgtcacc
ctcaccagcgaatccagcccgggcaagcgggagaaagacaaggagaaggacaaggagaag
cgattcagcctgttcggcaagaaaaaactataa
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integrated database retrieval system
