Oncorhynchus kisutch (coho salmon): 109890645
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Entry
109890645 CDS
T09179
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X2
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109890645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109890645
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109890645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
ADSL_C
Motif
Other DBs
NCBI-GeneID:
109890645
NCBI-ProteinID:
XP_020338203
Ensembl:
ENSOKIG00005047863
LinkDB
All DBs
Position
LG5:complement(12099138..12108478)
Genome browser
AA seq
301 aa
AA seq
DB search
MLATGAAVTTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSCGT
IAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPF
LHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVA
TFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDN
SSPHTRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPT
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atgctggctacaggagcagctgtaaccacggctctggcccaagtggatagggaaaagatc
taccagtggatcaacgagctgtccagcccagagacccgcgagaatgccctgctcgagctc
agtaaaaaacgggagtccgtgccagatttggctccaatgctatggcactcctgtgggact
atagctgctctcctgcaggaaatagtcaacatctacccctcaataaaccccccaaccctc
accgctcaccagtccaacagagtatgcaatgcattagcacttctgcaatgcgtggcctct
catccagagacaagatcagcatttctggcagcacacattcctctattcctgtaccccttc
ttacacactgtcagcaaaacacgaccatttgagtacctccgactcaccagcctaggagtc
atcggtgccttggtcaaaacagatgagcaggaagtgatcaacttcctgttgacgacagaa
atcattcccctgtgccttcgcataatggagtctggcagtgagctttccaaaacggtagca
acttttatactacagaaaatcctacttgatgacacagggctggcatacatttgccaaacg
tatgaacgcttctcccatgtggccatgatacttggcaaaatggttcttcagctctccaaa
gagccctctgctcgtcttttgaaacatgttgtccgctgttacctacgcctctcagacaac
tccagcccccacaccagagcccgagaggccctccgtcagtgtctaccagaccagcttaaa
gataccacgtttgcccaggtcttgaaagacgacaccaccaccaaacgctggttggcacag
ctggtgaagaacttacaggaaggccaagtcacagaccccaggggcatccctctgcccaca
cagtag
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