Oncorhynchus kisutch (coho salmon): 109890767
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Entry
109890767 CDS
T09179
Symbol
rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109890767 (rbm39)
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
General mRNP proteins
109890767 (rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RBD_DEAH11
PRP38_assoc
CDC45
Motif
Other DBs
NCBI-GeneID:
109890767
NCBI-ProteinID:
XP_020338374
Ensembl:
ENSOKIG00005027221
UniProt:
A0A8C7I0Q0
LinkDB
All DBs
Position
LG5:22388454..22446619
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AA seq
534 aa
AA seq
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MADDFDIEAMLEAPYRKDEIKHSSPNGHKERSKKKKKSRSRSRDRKRSKSRDHKKSHDHK
RSRSHERKRSRSRERRRSRERSGRYRDHKTTFSGPKFNGGSRGKIGPPPVIKLSRRRSRS
RSPFKKEKSPVRQVFLGEMTQKTSIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFF
SAVGKVRDVRMISDRNSRRSKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQVMAE
KNRAAAMANNLQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSK
GYGFITFSDTECAKKALDQLNGFELAGRPMKVGHVTERTDASNASSFLDNDELERTGIDL
GTTGRLQLMARLAEGTGLQIPPAAQQALQMGGAIAIGAMAAVSAAMNPAMNMNMNTAMNL
PSQPLATHCFQLSNMFNPRSEDNPGWDVDIQHDVIEECNKHGGVVHIYVDKNSTEGNVYV
KCPSVPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLFPDSVKATQLLIPLAH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactttgacatagaagcaatgcttgaggctccatatcgaaaggatgagatc
aagcacagtagtccaaatgggcacaaggaacgcagcaagaagaaaaaaaagagcaggagt
cgaagcagagacaggaagagaagcaaaagccgggatcacaagaagagccatgaccacaag
cggagccgcagccacgaacgaaagcggagccgcagcagggagaggcgccggagcagagag
cgcagcggccgctacagggaccacaagaccaccttctctgggccgaaatttaatggtggt
tccagagggaagattggacccccacctgtcatcaagctaagccgaagacgttctagaagc
cgaagccctttcaagaaagagaagagtcctgtgaggcaagtgttccttggggagatgacg
caaaagacctcaatcaggcagccaatagacaacctgactccagaggaaagggacgctcgc
acagtgttctgcatgcagctggcagccagaatccgaccacgtgacctggaggagttcttc
tctgcagtgggaaaggtgagagatgtgcgcatgatctctgacagaaattcgaggaggtcg
aaggggattgcttatatcgagtttgtggaggccaactcggtgccactggctataggattg
tctggccagcgacttctgggggtgccaataattgttcaggcctcacaggtaatggctgag
aaaaacagggctgctgccatggccaacaacctgcagaagggcaacgctggcccgatgaga
ctctacgtcggatccttacactttaacatcacagaggagatgctacgaggaatatttgag
ccttttggaaagattgagagtattcagctcatgatggatagtgagacggggagatccaaa
ggatatggcttcatcactttctcagacacagagtgtgccaagaaggctttggatcagttg
aacggctttgagctggctggccggccgatgaaggtgggccatgtgactgagcgcacagac
gcctccaacgccagctccttcctggacaacgacgagctggagaggacaggcatcgacctg
ggcaccactgggcgcctgcagctcatggccagactggctgaaggcacgggactgcagatt
cccccagcagcacagcaagccctgcagatgggtggggccattgctattggtgccatggcc
gctgtatcagctgccatgaatcctgccatgaatatgaacatgaatacagctatgaactta
ccctcacagccacttgctacacactgtttccagctgtctaacatgttcaaccctcggtct
gaagataacccaggctgggatgttgacattcagcatgatgtcattgaggaatgcaacaaa
catggaggagttgtgcacatatacgttgacaagaattccactgaaggcaacgtgtatgtg
aaatgtccatccgttcctgctgccatggctgcagtaaacgcattacatggtcgatatttt
gcaggtaaaatgatcacagcggcatacgtccctctcccaacatatcacaaccttttccct
gactctgtgaaggctacccagctcctgatccctcttgctcactga
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integrated database retrieval system
