Oncorhynchus kisutch (coho salmon): 109890769
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Entry
109890769 CDS
T09179
Symbol
rbm12
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109890769 (rbm12)
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109890769 (rbm12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
109890769
NCBI-ProteinID:
XP_020338380
Ensembl:
ENSOKIG00005027708
UniProt:
A0A8C7HWC2
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Position
LG5:22525171..22538271
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AA seq
874 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGAIKGSKVSLLLSSKTEMQNMIELSRRRFETGNVEGAAGNGSRPGPTVRTGGRGSLPTT
LQGFSNTTPTTVTTAASAHETISNKIVSTFATTSMGNMPPSFSNNFSSPNLTMGSTMTTA
MSSLNSVPPPIPPLPTMPSLPPMPSIPPMPLPPPVSSMPPVPTVSPLTQGPPVLPMSHLS
HMGSMPPFNPGIPPPGGLASGLPLGTPNHMFLGHMNPLLNIQAHMKAAIGNSDELYVHLQ
GLPFSGTEMDIREFFRGLAVDSIRLVRDNMGRSSGRALAKFFSPQDTFEALKRSTGMLGQ
RYVDISPATERQWMSVSGGGIGVGGQAHSKFNNEPQDQHRRSNMSSASPSTRDRARSRSP
HNKEFCVYLKGLPYEAVNKQICEFFKNLDIVEDSIYIAYGPTGRATGEGFVEFKNEMDYK
VALGCHMQYMGSRFIQVHPISKNAMFEKIGSIRQRMQGGDKKNNSESVKSPRNCAHISNI
PYNVSKKDVRLFLDGISVFDESLKVLVDSSGNGLGQAVMQFRAEEDALNAERLHRQKLNG
RDAFVHLITFEQMKEIERNPPPQVKRGQKPQGNTQGQAHSHVQAQNPVQGHPFAGMTGDE
FNFLRNTVGNLGNGPFTPFTVPGNGLVGPPPPPLAASLGDVALSIPPPMVAGHLPGAVLE
PPGFRPGSNNGPPGFGPEGLRGMPPFDNGPRKSRGLNHNNRGGGHGQSGGCPQSAFGPGS
DPLRGQSTGGPGNPRGPTIVKIQNMPFTVTVDEILDFFYGYQVLPGSVCLQFSEKGLPTG
EAMVAFESHKEATSAVMDLNDRPIGARKVKITLG
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcttgcagggtctcccgatagtggcgggcaccatggacatacgc
catttcttctctggattgactatcccggatggtggggtgcatattgtagggggtgaacat
ggtgaggcttttattgttttcgccacagatgaagatgccaggcttggcatgatgcgtaca
gggggagcaatcaaaggttctaaagtgtcacttttgctgagcagcaagacagagatgcag
aatatgatcgaacttagccgcaggcgttttgaaacaggcaatgtggagggagccgcagga
aacggtagcaggccaggccccacggttcgcacaggtgggaggggcagtttacccaccact
ttacaaggcttcagcaacaccacaccaaccacagtcaccacagctgcatctgcacatgaa
actataagcaacaaaattgtgtccacgtttgccacaactagcatgggaaacatgcccccc
agtttcagcaacaacttcagcagcccaaatcttaccatgggatccactatgacaacagcc
atgtcctccctcaactctgtaccaccacctatccctcctttgccaaccatgccatccctt
ccacccatgccttccataccccccatgccccttccaccacctgtgtcctctatgcctcct
gttcccactgtgtcacctttaacccaaggcccccctgtccttcccatgagtcatctgtcc
cacatgggctcaatgccaccatttaacccaggcatcccaccccctggtggactggcctca
gggctgcctctaggaaccccaaaccacatgtttctgggccatatgaaccctctgttaaat
atccaggcacacatgaaggcagcaataggtaattcagacgagttatatgtccaccttcaa
ggcctgcccttctcaggtacagaaatggatattagggagtttttccgtgggttagcggtg
gactccatccgactggtcagggacaacatgggccggagtagcggcagggcgctggccaag
ttcttttcccctcaggacacttttgaggcactcaaaagaagcaccggaatgttagggcaa
aggtatgttgacatctctccggccacagagaggcagtggatgagtgtcagcggtggtggc
atcggggttggagggcaagcccactcaaaattcaataatgagccgcaagaccagcaccgc
cgcagcaacatgagttcagcgtccccgtcaaccagagaccgtgcgaggtcccgttcccct
cacaacaaggagttctgtgtttacctgaaaggcctgccctatgaagcagtaaacaaacag
atctgtgagtttttcaaaaacttggatattgtggaagacagcatttacattgcttatgga
cccactggccgagctacaggcgagggctttgtcgagttcaaaaatgaaatggactacaaa
gttgcactcggctgtcacatgcagtatatgggtagccgattcatacaagttcaccccatc
agtaaaaatgctatgtttgaaaagattggttccattcgtcaaaggatgcagggtggtgat
aagaaaaacaactcagaatcagtcaagagccctagaaactgtgctcacatctcaaatatt
ccatataatgtgtcaaagaaagatgtccgtctgtttctagatggcatttcagtatttgac
gaaagtcttaaagttctggttgacagcagtggtaacggtctaggtcaggctgttatgcag
ttcagggcagaggaggatgcactaaatgctgagagactacacaggcagaaattaaatggc
agagatgcctttgtacatttgatcacctttgagcagatgaaggaaattgagagaaaccca
ccaccacaggttaaaagaggccagaaaccccaagggaacactcaaggccaggcacacagc
catgttcaggcacagaatccagttcaaggtcacccctttgccggtatgacaggagatgag
ttcaacttcctcagaaatactgtaggcaatttaggcaatggtccttttacgccgtttact
gtcccaggtaatggactagtgggcccccctccacccccacttgcagcaagtcttggggat
gtagcccttagcatacccccacccatggttgccggtcacttgcctggagcagttctggaa
cccccgggcttccgaccaggcagcaacaatggcccacctggctttgggccagagggattg
aggggcatgccaccttttgacaatggccctagaaagagcagaggcctcaaccacaacaac
cgaggaggcggccatgggcaatcaggagggtgtcctcagtctgcctttggccctggctct
gaccctctgagaggacaatcaaccggaggccctggtaaccctcgtggacctaccattgta
aagattcaaaacatgcctttcactgtaacagttgatgagattctcgatttcttttatggg
tatcaggtactgcctggttcagtctgtctgcagttcagtgaaaagggcctgcccaccggt
gaggcaatggttgcctttgagtcacacaaggaggctacatctgctgtcatggatttaaat
gataggcctattggggctaggaaagtgaagataaccctaggataa
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