Oncorhynchus kisutch (coho salmon): 109890883
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Entry
109890883 CDS
T09179
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2 isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04260
Cardiac muscle contraction
oki04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109890883
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
109890883
04261 Adrenergic signaling in cardiomyocytes
109890883
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109890883
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109890883
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
dCache_2
MCP-like_PDC_1
DASH_Spc19
Fe_dep_repress
Motif
Other DBs
NCBI-GeneID:
109890883
NCBI-ProteinID:
XP_020338573
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Position
LG5:complement(30408924..30663739)
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AA seq
1112 aa
AA seq
DB search
MAICAQSYGILCMFSIQTVLIISVSSPATGSLRFPQHYTMMHWAGRIEKELEKTLQLVTG
AQQMKGIYNEKKSQFDIKRNNPKDLVERVARDIAKLLTSKRRALERLAREAEQLQTMYPW
QDGIKESDMEYYDSKAESDYTEDEDGEENLMENPYSVKLEFVDDPNFKNKVNYSYSAVQI
PTDIYKGSPVILNELNWTQALERVFIDNRREDSSLRWQVFGSSTGVTRYYPATPWRAPNK
IDLYDVRRRPWYIQGASSPKDMIIIVDVSGSVSGLTLKLMKSSVMQMLDTLSDDDYVNVA
RFNEKADAVVPCFKTLVQATMRNKKIFKESIMNMQAKGTTDYKSGFQFAFEQLLNDTGAP
RAGCNKMIMMFTDGGEDRAQDIFEKYNWPNKTIRVFTFSVGQHNYDVTPLQWIACANKGF
YYEIPSIGAIRINTQEYLDVLGRPMVLAGPKAKLVQWTNVYQDALGLGLVITGTMPVFNL
TADANSQTQLVLGVMGVDVAINEIKRKTPTYRLGANGYTYAIDKNGYLLLHPNLQPKIIN
FREPVTLDFLDAELEDSKKEEIRRDMIDGKPGHRKIKTLIKSVDERYIDEAMRTYSWTPV
EGTDYSLGLVLPTYSENHIKANLSDQILQVQYFESLLPNSFESEGHVFIAPREYCNELEL
SNNNTDFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVEKVWKTKDLTTYGFLA
VFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYRTLNDELLNPEN
DTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAWVDKFKILASNQTSPTSDNRQVQQTCG
PTSGCEMDCDANSEDLLCYLVDDGGFLIMSNQKDYWNKIGMFFSEVDPYLMHALYNNSFY
NRKQSFDYQSVCDPVPSSNTGAAPRGVFVPTIADFVNLAWWTSAAAWSLFQQLLCGMAYH
SWFVTDEVEAEGMDSRETSCVTIQTQFYFTNINSSYDILQDCGNCSRLIHAKRLNNTNLL
FVVAEKMPCHTCEVEKLSQAETEFKDDNPSCEDMSAARYRKGPTVCYDYNLAENTSDCGR
GHSFRPSFQTLLTIQLVLLYPIASTHILPLLL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagtcctacggtattttatgtatgttctcaatccaaactgtcctc
atcattagcgtctcttcgccggcaacggggagcctccgcttcccccagcactacacaatg
atgcattgggcaggccgtattgagaaggagctggagaagactctgcaactggtcactgga
gcccagcagatgaaagggatttacaatgagaagaagagccagtttgacatcaagaggaac
aatcccaaggacctggtggagagggtggcacgagacatcgccaagctgctcactagcaag
aggagagccctggagaggctagccagagaggcggagcagctgcagacaatgtatccctgg
caggacgggatcaaggagagcgacatggagtactatgattcgaaagcggaatcagactat
acggaggatgaagacggagaagagaacctgatggagaacccctactccgtgaagcttgag
tttgtggacgatcccaactttaaaaacaaagtgaactactcctacagtgccgtccagatc
cctacagacatctataagggctccccagtcatcctgaatgagctgaactggacccaggct
cttgagagggtgtttattgataaccgccgggaggacagctctctgcgctggcaggtgttc
ggcagctcgacgggggtcacaagatactacccagccactccttggagagcacccaataag
attgacctgtatgacgtgcgcagacgaccatggtacatccaaggggcatcctctcccaag
gacatgatcatcattgtggatgtgagtggcagtgtcagtggactcaccctgaagctgatg
aagtcctctgtgatgcagatgctagacactctgtcagatgatgactatgtgaatgtagcc
aggtttaacgagaaggcagatgccgtggtcccctgctttaagaccttggtccaggccacc
atgagaaacaagaagatcttcaaggagtccatcatgaacatgcaagccaaaggaaccact
gactacaagtctggcttccagttcgccttcgaacagctactcaatgataccggcgccccg
agggcgggctgcaataagatgataatgatgtttacagatggaggagaggatcgtgcccag
gacatctttgagaagtacaactggcccaacaaaaccattcgagtatttaccttttcagtc
gggcagcacaactatgatgtcacacctttgcagtggatagcttgtgccaacaaaggattc
tactacgagattccatccattggcgccatcagaattaacacgcaggagtacctggatgtg
ctgggtcggcccatggtgctggctgggcccaaggccaagctggtccaatggaccaacgtc
taccaggatgctctgggtctgggtctggtcatcaccgggaccatgccggtcttcaacctc
accgctgacgcaaactctcagactcagctcgtccttggtgtcatgggagtggatgttgcg
atcaacgaaattaagaggaagacgccaacgtataggcttggagccaatggatacacgtat
gcaatcgacaaaaatggctatttgctcctgcaccccaacttacaacctaagatcattaac
ttcagagagcctgtcactctggacttcctggatgctgagctggaagacagtaaaaaggag
gagatccgtcgtgacatgattgatggaaaaccagggcataggaaaatcaagaccctcatt
aagtcagttgatgagaggtacattgatgaggctatgcggacatactcctggacaccggtg
gaaggcacagattacagtctcgggctggttctgcccacgtacagtgagaaccacatcaag
gctaacctgagtgaccagatcctgcaggtgcagtattttgaatctctgctgccaaacagt
tttgagtctgaaggacatgtattcatagctcccagggaatactgcaatgagctggagctc
tccaacaacaacactgacttcctgctcaacttcatcgctctcatggagaaggtgactccc
gactccaaacaatgtgacaacctgctccttcataacctcatcctggacacgggcatcatc
agacagctggtggagaaggtgtggaagaccaaagacctcaccacatatggctttttggca
gtgtttgctgcaactgatggagggattacaagagtttttcccaacaaggctgctgagacc
tgggaggaggaccctgagccttttaacgccagctattaccgccgtagtctggacaacaag
ggctacatcttcagagcgccttatcgcaccttgaatgatgagctgctgaatccagagaac
gacaccatagggatcctggtcagcactgcggtggagatcacagtgggagggaagacaatc
aaacctgcagtggttggagtaaagctggatcttgaggcctgggtggacaaattcaagatc
ctggctagcaaccaaacaagtccaacaagtgacaaccgccaagtccaacaaacgtgtgga
ccgaccagcggctgtgagatggactgtgacgccaacagcgaagacctgctgtgttacctg
gtggatgacggtggtttcctgatcatgtccaatcagaaggactactggaacaagattggc
atgttcttcagtgaggtggacccctacctgatgcatgctctctacaacaactccttttac
aaccggaagcagtcctttgactaccagtctgtgtgtgaccccgtgccgagcagcaacacc
ggggctgcgccaagaggcgtgtttgtgcccaccattgccgactttgtgaacctggcctgg
tggacatcagcagcggcctggtccctattccagcagctgctctgtggaatggcttaccac
agctggtttgtcacagatgaggtggaggcagaggggatggactccagagagaccagctgt
gtgacgatacagactcagttctacttcaccaacatcaacagttcctatgacatcctgcag
gactgtggcaactgctccaggctgatccatgccaagaggttaaacaacaccaacctgctg
tttgtggtagcagagaagatgccctgccacacctgcgaggtggagaaactgtcccaggcg
gagacagagttcaaggacgataacccatcatgtgaggatatgagtgcagcgaggtatcga
aaagggccaactgtgtgctacgactacaatctcgctgagaacacatctgactgcgggcgc
ggccactccttccgcccctccttccagaccctgctcacgattcagcttgtcctgctctat
ccaatcgccagcacccatattctgcccctcctactttaa
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