Oncorhynchus kisutch (coho salmon): 109890896
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Entry
109890896 CDS
T09179
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109890896
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109890896
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
109890896
NCBI-ProteinID:
XP_020338607
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All DBs
Position
LG1:57634435..57646752
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AA seq
869 aa
AA seq
DB search
MAVVIRMQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRN
GGAIKGSKVSLLLSSKTEMQNMIELSRRRFKTGNVEGAAGNGRRPGPPVNTCGRGSLPNT
LQEFSNTTPATVTTAASAHETISNKNVSTFAPTGMGNMPPSFSNNFSSPNLTMGSSMRTA
MSSRNSVPLPIHPLTTMPSLPPMPSIPPMPLTPPVSSVPPVPTVSPLTQGPPVLPMSLSH
MGSMPPFNPGVPPPSGLAPNHMFVGHMNPLLNLQAHMKAAIGNSDELYVHLQGLPFSATE
MDIGEFFCGLGVDSIRLVRDNIGRSSGRALAKFFSPQDTFEALKRSSGMLRQRYVDISPA
TESQWMSVSSGGNGVRGQAHSKSSNVPQDQHHRSNMNSASPSTRDHARSRSPHNKEFCVY
LKGLPYEAVNKQICEFFKKLDIMEDRIYIAYGPTGRATGEGFVQLKNEMDYKVALSCHMQ
YMGSRFIQVHPISKKAMFEKIDSIRQRMQGVDKKNNSESGKSPRNCAHISNIPYNVSKKD
VHLFLEGIAVFEESLKVLVDSSGNGLGQAVVQFRVEEDALNAERLHRQKLNGRDAFVHLV
TFEQMKEIERNPPPQVKRGQKFEGNSQGQAHGHAQAQNPIQAQAHPFASITGEEFNFLRN
TVGNLGNGPFAQFTVPGNGIVGPPPLTPFAASLENVAHSIPPPMVAGHLPGAVLASPSFR
PGSNNGPPGFGPEGMRDRPPFDNGSRKSGGHNNRGSGQGRLEVRPQSALGRGPGSDPLRE
QSHGGPGNPRGPTIVKIQNMPFTVTVDEILDFFYGYQVLPGSVCQQFSEKGLPTGEAMVA
FESHEEASSAVMDLNDRPIGARKVKITLG
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcatgcagggtctcccgatagtggcggggaccatggacatacgc
catttcttctctggattgaccatcccagatggtggggtgcatattgtagggggtgaacat
ggtgaggcttttattgttttcgccacagatgaagatgccaggcttggcatgatgcgtaac
gggggagcaatcaaaggttcaaaagtgtcacttttgctgagcagcaagaccgagatgcag
aatatgattgagcttagccgcaggcgttttaaaacgggcaatgtagagggagcagcagga
aatggtagaaggccaggtccccccgtcaacacatgtgggaggggcagtctacccaacact
ttacaagagttcagcaataccacaccagccaccgtcaccacagctgcctctgcacatgaa
accataagcaacaaaaatgtgtccacgtttgcccccactggcatgggaaacatgcccccc
agtttcagcaacaacttcagcagcccaaatctcaccatgggatccagtatgagaacagcc
atgtcctcccgcaactctgtaccactacctattcaccctttgacaaccatgccatccttg
ccacccatgccttccataccccccatgccacttacaccaccagtgtcctctgtgcctcct
gttcccactgtgtcacctttaacccaaggcccccctgtccttcccatgagtctgtcccac
atgggctcaatgccaccattcaacccaggtgtcccaccccctagtggactggccccaaat
cacatgtttgttggccatatgaaccctctgttaaatctccaggcacacatgaaggcagca
ataggtaattccgacgagttatatgtccaccttcaaggcctgcccttctcagctactgaa
atggatattggggagtttttctgtgggttaggggtggactccatccgactggtcagggac
aacattggccggagtagcggcagggccctggcaaagttcttttcccctcaggacactttt
gaggcgctcaaaagaagcagcggaatgttaaggcagaggtacgtggacatctctccggcc
acagagagccagtggatgagtgtcagcagtggtggcaacggggttagagggcaagcccac
tcaaaatccagtaatgtgccccaagaccagcaccaccgcagcaacatgaattcagcatct
ccttcaaccagagatcatgcaaggtctcgctcccctcacaacaaggagttctgtgtctac
ctaaaaggcctgccctacgaagcagtaaataaacagatctgtgagttcttcaaaaagctg
gacattatggaagaccgcatttacattgcttatggacccactggccgagctacaggtgag
ggctttgtccagttgaaaaatgaaatggattacaaggttgccctcagctgtcacatgcag
tatatgggaagccgattcatacaagttcaccccatcagtaagaaagctatgtttgaaaag
attgattccattcgtcaaaggatgcagggtgttgataagaaaaacaactctgagtccggc
aagagccctagaaactgtgcacacatctcaaatattccatataatgtgtcaaagaaagat
gtccatctgtttctggaaggcattgcagtatttgaagaaagtctgaaagttctggttgac
agcagtggtaatggtctaggtcaggctgttgtgcagttcagggtagaggaggatgcgcta
aatgctgagagactacacaggcagaagttaaatggcagagatgcctttgtgcatttggtc
acctttgagcagatgaaggaaattgagagaaacccaccaccacaggttaagagaggccag
aaatttgaagggaactctcaaggccaggcacacggccatgctcaggcacagaatcctatt
caagcccaagctcacccctttgccagtataacaggagaagagttcaacttcctcagaaac
actgttggcaatttaggcaatggtccttttgctcaatttactgtcccaggtaatggaata
gtgggccctcctcctctaaccccatttgcagcaagtctagagaatgtagcccatagcatt
cccccacccatggttgctggtcacttgcctggagcagttctggcatccccaagcttccga
ccaggtagcaacaatggcccacctggctttggaccagagggcatgagggacaggccacct
tttgacaacggctctagaaagagcggaggccataacaaccgaggaagtggccaagggcgt
ttagaagtgcgccctcagtctgccttgggccgtggccctggctctgaccctctgagagag
cagtcacacggaggccctggtaaccctcgtggaccaaccattgtaaagatccaaaacatg
cctttcaccgtaacagtcgatgagatcctagatttcttttatgggtatcaagtgctgcct
ggttcagtctgtcaacagttcagtgaaaaaggcctgcccactggtgaggcaatggttgcc
tttgagtcacacgaggaggcatcatctgctgtcatggatttaaatgataggcctattggg
gctaggaaagtgaagataaccctaggataa
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