Oncorhynchus kisutch (coho salmon): 109890898
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Entry
109890898 CDS
T09179
Symbol
prdm2
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00310
Lysine degradation
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109890898 (prdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109890898 (prdm2)
03036 Chromosome and associated proteins [BR:
oki03036
]
109890898 (prdm2)
Enzymes [BR:
oki01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
109890898 (prdm2)
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109890898 (prdm2)
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
109890898 (prdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-C2HC_2
zf-C2H2_jaz
zf-C2H2_11
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
109890898
NCBI-ProteinID:
XP_020338609
Ensembl:
ENSOKIG00005035778
LinkDB
All DBs
Position
LG5:complement(31139524..31160105)
Genome browser
AA seq
1757 aa
AA seq
DB search
MAVPGGTMETLADIPHHVWKSLPDGLRLSPSAVDQSRIGVWASRSIPKGKRFGPFVGEKK
KRSQVSSNVYMWEVYFPARGWMCVDATDPMKGNWQRYVNWANSTQEQNLFPMEINRAIYY
KVLRPIGPGDELLVLYNGEDNPEITAALEEERGSSLSKKNSPRAKRARRKLLEGARQAGL
GAFRGPKQTGVTKPILKEMWDTEEGPNEEDERLSHHQGTRESSPMGRNGPSQAQFISAAM
RGEAEEDDEEEDPGDLQQSLSLTQQSVQSATEAEPEDRSEQPDRPLSHSSPVEEGPGSLQ
HDTETASSLPRAEPEADPDPDPDLEGDPHGEESHPCQHCERHFSTKQGLERHTHIHATAN
QQTHTFKCRYCGKSFGSQVGRRRHERRHENGPKNKGQRPGSLAGTATLLTPLGQAGGSSP
DCGTVSGHYVVRGSPVPGGPMGSLEVVKKDPAAESDRPFIVDENGETKELHPCKYCNKAF
GTHTNMRRHQRRIHERHLLPKGVRRKGMLLQESPSQQQLHHLPEQSPSVSPPLVYVPSAD
TEDEGDREEYLVDIANNISENLSLYIDGKILSTSSVSGCEVIEVDSSSAALFGLDAVVIS
PNQISQALKVDTRTCAVRQVSNLGQPMSKRRTSTPPLMPSLKMESETGSSSASSSSSTSS
SSTLLVGSVFPQSSDSLAFQKEKTIYLSPKLKQLLQTQTDSQKPAIALIAERHRLAPPLS
ITSLPAASGRFKRRTASPSSPQLSPALKANGCKNEAGVSSYTLKVPNLETLGMSPAWSLS
SKEERDTLSPSGKDGCSWSASRTGGNSCNQQPLDLSSGISKRRDSFNKTPGEVVLDLSMS
RKSTAESKGSPSPAQPPTKKKKPNTSMLEKVLMNEYAGLNPAEEEGSSPLGSPDSQYTAG
SGTGTASHSPSSNLPSESAHPSPPSLTPVTMNPSSPCGSSLTSPTPPPPVLPTMPSPDCP
TLISSLPVLSHKMSPRSIDQGEDEPVCVSNSTTAETMLAAVSNSYGDEEHINKPIDSNPD
PLTREAISSPSTETSLVSDAVALSLSSTQSKPARTGNQLDVQVNQDLEPIITEGQEKSQC
SELPVLSSVTESLLSASSTSPAAISDIPAPPAVSPPSLSSTVIKGDPQHSEQLADLVLSP
SGTGSSPLSAAADKPSSLSEEEEGSPPEPFSKSFVCNVCEDPFRAIKELSRHILEHAAEW
PYKCEFCVQLFGNAPALLEHRTALHGVGRVFVCSVCSKEFAFLCNLQQHQKDLHPSQPCT
HTAVENGKPRPQNYTDPARAKEESNPSSTVATGPESSPEVASSQGVSDVKKEEPDTNGKH
EEDGLEYLTEELYTTIKIMASEGGKPKGPDVRLGINQHYPSFKPPPFPYHNRTAAGSVAS
ATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKKNPIPLRQI
VKPQNGSLSPASAANAGHTAFRRMGQPKRLNFNQEPLGKTKMSSLGKKKSQLVQKAVGQR
NETAATVNKAPSQVKQEEPQEQEVHVCPHCSREFTYPASLNKHIAGSCPMKPVSKKAKKE
AATEATPAVDKNMSLRRRTTDSEIQQPEPAEPVPKTLSKTRARNSGPGPAEAEAPPLVGK
GKMAATQVCTKRPASFPAATASLSKKSKKGKVQSLPPTPLPSESPSDSALRPAAQTKQRM
GKEVPPKKGAEVKSPPQQQSRVPSKKEGERFSLRARERAVGPVTRSLQMANTAAPVEVKT
DDLSSQEPEETQEYLLK
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcctggagggacaatggaaacgcttgctgacattccacaccatgtgtggaag
agcttgcccgatggcctgagactaagcccctctgctgttgatcaaagtcgaattggtgtc
tgggcctctaggtcgattcctaaaggcaagaggttcggcccttttgtaggagagaagaaa
aagcggtcccaggtgtccagcaatgtatacatgtgggaggtgtattttccagccaggggc
tggatgtgtgtggatgccacagaccccatgaaggggaactggcaacggtatgtaaactgg
gctaactccactcaagaacagaaccttttccccatggagataaaccgagccatttactac
aaagtgttacggccaattgggccaggggatgagctgctggtgttgtacaatggggaagac
aaccctgagataacagctgcactagaggaagaaagaggcagcagtctgagcaagaaaaat
tcacccagggcaaagcgagccagaagaaagctgttggagggagcaagacaggctggtttg
ggtgcattccgtgggcccaagcaaacaggcgtaaccaaacctattctcaaagagatgtgg
gacacagaggaaggtccaaatgaggaagacgagagactctcccatcaccaggggacccgg
gagagctcccctatggggaggaacggcccctctcaagcccagttcatctcagcagcaatg
agaggggaagcggaggaggatgatgaagaggaagacccaggggatctgcagcagtcgctg
tcactgacacaacagagtgttcagtctgctactgaagctgagccagaggacaggagtgag
cagcctgatcggccactaagccatagcagcccagttgaggaggggcctgggagccttcag
catgacactgagactgcctcatcgctaccaagggctgaaccagaggcagaccctgacccc
gaccctgacctggaaggtgacccccacggagaggagtcccatccctgccagcactgcgag
cgccatttctccaccaaacagggcctggagcgccacacacacatccatgccaccgcaaac
cagcaaacgcacacgttcaaatgccgttactgtggcaagtctttcggctcgcaggtgggg
cgtcggcggcatgagcggaggcatgagaacgggccaaaaaacaaaggccaaaggcctggc
tcactagctgggactgctactttactcactcctctggggcaggctggtggttcgagccca
gactgtggcactgtctctggccactatgttgtcaggggctcccctgtccctggaggacct
atggggagccttgaggttgtgaagaaggaccctgcggctgagagtgaccggccgtttatc
gtggatgagaatggtgagacaaaggagcttcatccctgcaagtactgtaataaggctttc
ggcactcacaccaacatgcgcagacaccagcgcagaatccacgagcgccacttactgccc
aagggtgtccgcaggaaaggcatgctgctgcaggagagcccatctcagcagcagctgcat
catctgcctgaacagtcccctagcgtcagcccacccctcgtctatgtgcccagtgcagac
actgaggatgagggggaccgagaggagtacctggtcgacatagccaataacatctcggag
aatctcagcctgtacatcgacggcaagatcctgtccactagttcagtcagtggctgtgag
gtgatcgaagtggactccagttctgcagcactgtttggtctcgatgcagtggtcatcagc
cccaatcagatcagtcaggctctcaaagtggataccaggacatgtgctgtgaggcaggtc
tcgaatctcggccagcccatgtcgaaaaggagaacgtcgacacccccgctcatgccaagt
cttaaaatggagtctgaaactgggtcctcttccgcctcctcttcctcctccacgtcttcc
tcatccaccttgttggtgggaagtgtcttccctcagtcctcagactcattagcatttcaa
aaggagaaaacgatctatctgtctcctaagctcaaacagctcctccagactcagacagac
agtcagaaacctgccattgccctgatagcagagaggcacagattagctccccctctctcc
attacgtctctgcctgcagcctcaggcaggttcaagagaagaacagcttccccctcatct
ccacagctcagccctgcactgaaagcaaacggctgtaagaatgaggcgggggtctcgtcg
tacaccctcaaggtgccaaatctggagaccctgggcatgtcccctgcctggagtctgtcc
agcaaggaggagagggacacactgagtcccagcgggaaggacgggtgcagctggtctgcc
tctcggaccggagggaactcgtgtaatcagcagcccttggatctgtccagcggcatcagt
aagaggagggacagcttcaacaagacgcccggggaggtagtgctggatttaagcatgagt
cggaagagtacagcagagtctaagggaagtccatctccggcacagccccccaccaagaag
aagaagcccaacaccagcatgctagagaaggtgttgatgaacgagtatgccggcttaaac
ccagcagaagaggaaggctcttctcccctgggaagcccagattctcagtatactgcaggc
agtggtacaggtaccgcatctcacagtccctcttccaatctgccctctgaatcagcccat
ccctctcccccctctctaacgcccgtcacgatgaacccctcctccccttgcggctccagc
ctgacctctccaacgccacctccccctgtcctacccaccatgccctcaccagactgccct
acgctcattagctctctccctgtcctctcccacaaaatgtcccccagatctatcgaccaa
ggtgaggacgagccagtttgcgtatcgaactctaccacagcagagacaatgttagctgca
gtaagtaacagttatggagatgaggaacatatcaataagccaatagactctaatccagat
ccccttaccagggaagctatttcaagcccctctacggagacctccttggtatctgatgct
gtcgctctgagtctgtcctcaacacaatcgaaacctgctaggactgggaaccagctggat
gtccaagtgaatcaagacctggaaccgattattactgagggacaggagaaatcccaatgc
tctgaactccctgtattatcatccgtaacagaatccctcctctctgcctcatcgacctcg
cctgctgccatatcggatatcccagctccaccagcggtctccccgccatctctctctagc
actgtgattaaaggggatccccagcacagtgaacaactggctgacttagtcctttctcct
agtggcacagggtcttcacctctgtctgctgctgctgacaaaccctcgtcgttgtcagag
gaggaagagggatcgccgccagagcccttcagtaagagctttgtgtgtaatgtatgtgag
gaccccttccgcgccatcaaagagctcagtcggcacatcctagagcacgcagctgagtgg
ccctacaagtgtgagttctgcgtgcagctgttcgggaacgcccctgctctgctggagcac
cgcacggccctccacggcgtgggacgcgtctttgtctgctccgtctgctccaaggagttc
gccttcctctgcaacctccagcagcaccagaaggacctgcatcccagccagccgtgcact
cacacagcggtggagaacggcaagcccaggccacagaactacacagacccagccagggcc
aaagaggagagtaacccctcctcaaccgtagccacagggcctgagtcctctcctgaagtt
gcttcctcccagggggtctctgatgtgaagaaggaggagcctgatactaacgggaagcat
gaggaggatggactggagtacctaactgaagagctgtacactactataaagatcatggcc
tctgagggaggcaagcctaaaggcccagacgtacgcctgggcattaatcaacactacccc
agtttcaagccaccccccttcccctaccacaaccgcactgctgcaggctctgtggcctcg
gccaccaacttcactacccacaacatcccccagacattcagcactgccatccgctgcacc
aaatgcggcaagagtttcgacaacatgcccgagctgcacaagcacatactagcctgtgcc
aacgccagtgataagaggcggtacactcccaagaagaaccccatccctctgagacagata
gtgaagccccagaacggctctctgtcgcctgcctctgctgccaatgcagggcacaccgcc
ttccgcagaatgggccaacccaagaggctcaacttcaaccaagaaccgcttggcaaaacc
aagatgagttccctcggtaagaagaagagccagctggttcagaaggccgtcgggcaaagg
aatgagactgcagctactgttaacaaggcccctagccaggttaaacaggaggagccgcaa
gagcaggaggtccacgtatgccctcactgcagccgagagttcacctaccctgccagcctc
aataaacatatagcaggcagctgtcccatgaagccagtctctaagaaggccaaaaaggaa
gccgcaacagaggcaacaccggctgtagacaaaaacatgagccttcgacggagaaccaca
gactctgagatccagcagccagaaccggctgagccggttcccaaaacgcttagcaaaact
cgggctcgcaactctggacctggccctgcggaggctgaggccccaccactggtgggtaaa
ggaaagatggctgccacacaggtgtgcaccaagaggccagcctctttcccagcagccaca
gcttctctcagcaagaaaagtaaaaaaggcaaagttcaatcgttaccccccaccccattg
ccctccgagagtcccagtgactctgcactgcggccagcagctcagacaaagcaacgcatg
ggcaaggaagtgccacccaagaagggagcggaggtgaaatcgcccccacagcagcagtct
cgggtgccgtctaagaaagaaggggaacggttctctctgagagcgagggagcgggctgtc
gggccggtgacccggagcctacagatggccaacactgcagctcctgtggaggtgaaaaca
gatgacctctccagccaggagcctgaagagacccaggagtacttgctgaagtga
DBGET
integrated database retrieval system
