Oncorhynchus kisutch (coho salmon): 109890938
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Entry
109890938 CDS
T09179
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109890938
Transcription factors [BR:
oki03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
109890938
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
YabA
Oscp1
DUF5365
Motif
Other DBs
NCBI-GeneID:
109890938
NCBI-ProteinID:
XP_020338691
Ensembl:
ENSOKIG00005000439
UniProt:
A0A8C7CIF2
LinkDB
All DBs
Position
LG5:34057480..34061591
Genome browser
AA seq
409 aa
AA seq
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MERITSAQPPPCMAKHQLLEMADMQGMDFPMYVYKPRRGLKRGEDSKESYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLATLGHLEKAVVLELTLKHVKALSTLLDQQQQKIIALQN
GMQISDQKSVSSENSEEMFRLGFHVCAKEVLQYLANQESSKDHLIPSHMISHLQKVASEV
LQGPPRPQPEESTHKPVESMEKPAGHPHKGNEGNAKNFVSVIQRTYPHGHGEQSGSDTDT
DSGYGGEHEKRDPKGQHTSCYSKEGDLKYDVAERMAGGGIKQEGDEPQIKRLRADSSEDE
SSSGQVVSSHGSYMSFSQHQTPLCMPFYLIPQMAAAWPMLEKCWYQGGMPLLYPGMSGSA
ASLSPEKLPQNLVMSPRPGSPAHHQAPMDTPALFQALKQVPPMNLESKD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattacaagtgcacaacctcctccttgtatggcaaaacaccagttgctggag
atggcagacatgcaaggaatggatttcccaatgtacgtgtacaaaccccgacggggtttg
aagcgcggggaagacagtaaggagtcatacaagttaccccaccgattgattgaaaagaaa
agacgtgacagaatcaatgaatgcattgcccaactgaaggatttattgccagaacatctc
aaactcgcaactctgggccatttggagaaagctgtggtgttggaactcaccctgaagcat
gtgaaagccctgagcactctcctggatcagcagcagcagaaaatcattgcattacagaat
ggcatgcaaatcagtgatcagaaaagtgttagctcagagaacagtgaggagatgttccgc
cttggtttccacgtctgtgctaaggaggtcctccagtacctggctaaccaggagagcagc
aaagaccacctgatcccctcccacatgatcagccatctccagaaagtagcatcagaggtg
ctccagggtccacccaggccccagccagaagagtctacacacaaacccgtcgagagcatg
gaaaagcctgctggtcatccgcataagggcaacgagggtaacgcaaagaactttgtgtct
gtcattcaaaggacatacccccacggacatggggagcagagtggcagtgacacagacact
gacagtggctatggaggggaacacgagaaacgggaccccaaaggccaacacacaagctgc
tacagcaaggagggggacctcaagtatgatgtggctgagaggatggcaggaggtggcatc
aagcaggagggtgatgagccccagatcaagaggttaagagctgactcctcagaggatgag
tcttcctctggacaggtggtcagcagccacggaagctacatgagcttctcccaacaccag
accccactctgcatgcccttctacctcatcccccaaatggctgcagcatggcccatgctg
gagaagtgctggtaccaagggggcatgccccttttgtacccaggcatgagtggctctgca
gccagcttgtctccagagaaactaccccaaaacctggtaatgtcgcccaggccaggttcc
ccggcacaccaccaggcacctatggatacaccagctctcttccaagctttaaagcaagtc
ccccccatgaacttggaatctaaagactga
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