Oncorhynchus kisutch (coho salmon): 109890948
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Entry
109890948 CDS
T09179
Name
(RefSeq) CXXC-type zinc finger protein 1-like isoform X1
KO
K14960
COMPASS component SPP1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109890948
03036 Chromosome and associated proteins [BR:
oki03036
]
109890948
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
109890948
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
109890948
COMPASS/SET1 complex (yeast)
109890948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
109890948
NCBI-ProteinID:
XP_020338715
Ensembl:
ENSOKIG00005000830
LinkDB
All DBs
Position
LG5:complement(34660590..34672598)
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AA seq
571 aa
AA seq
DB search
MDSEVSDFEPAPGLVSTMEGEKAQVYCICRKPDINCFMIGCDNCNEWFHGNCINLTEKMA
KAIRQWYCLRCQDDNPSLEIKYRPKKSREKEAESQRESERNFESQNSTPDYKSEKRRGSN
VKRSARMCGECEPCLRTEDCATCDFCKDMKKFGGPNKIRQKCRFRQCDVRARKMLRVKDE
EFNLRERRDNSYHRRRRYSDDYDSEAELYEKYKAAGYDENMPWLSNEEDGPPFSPVLRKK
AVKVKHVKRRENTFDKKKESRRHKQKQKHKDKLRHNNKGDARDGGGQRQCLGPSCVEAAR
ANSKYCSEECGIKLAANRIFEILPQRIQQWQQSPCVAEEQGKKQLERIRRDQQNARIRLT
DMEKRFHELEGIIAKAKQQVVQQDEEANEGDNEETDLLIFCVSCSHPINPKVALRHMERC
YAKYESQTSFGSMYPTKIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPGDEVCG
CPLVRNVFEVTGEHCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNMRTA
MTNRAGLLALMLHQTIQHDPLTTDLRCNKDR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaagtgtcagacttcgagcctgcaccgggacttgtgagcactatggagggg
gagaaggcacaggtgtactgcatttgtcgaaaacctgacatcaattgcttcatgattggt
tgtgacaattgcaatgagtggtttcatggtaactgcatcaatctcacagagaagatggcc
aaagctatcaggcagtggtactgcctgcgatgccaagacgataacccatcattggagata
aaataccgtccaaagaagagccgtgaaaaggaggcagagagccagagagagtcagagaga
aattttgaaagtcagaacagcactccagattataaatctgaaaagcgccgtggatcaaat
gttaagcgttccgctcgtatgtgtggggagtgcgagccctgcttgaggactgaggactgt
gccacatgcgacttctgcaaggatatgaagaaatttggtggtcccaacaaaataagacag
aagtgtcgatttaggcagtgtgatgtccgagccaggaaaatgttgcgtgtgaaagatgaa
gagtttaatttgcgtgaaaggagggataattcctaccaccggcgaagacgatattcagat
gactacgatagtgaggcagaactctacgaaaagtacaaggcggcaggatacgacgaaaac
atgccatggctcagtaatgaggaggacggccctcccttcagccctgtcctgcgaaagaaa
gctgttaaggtcaagcatgtgaagagacgcgaaaatacatttgacaagaaaaaagagtca
cggcggcacaaacagaagcagaagcacaaggacaaacttcggcacaacaataagggcgat
gccagagatggaggaggacagcggcagtgcctcgggcccagctgtgttgaggcagcacgc
gccaactccaaatactgctcagaggaatgtggcataaagctggctgccaaccggatcttt
gagattctccctcagcgtatccagcagtggcagcagagcccctgcgtcgctgaggagcag
ggcaagaagcaactggagcggatccggagggatcagcagaatgcccgcatacgcctcacc
gacatggagaaacgcttccacgagctggagggcatcattgccaaggccaagcagcaggtg
gtccagcaggatgaggaggcgaatgaaggggataatgaagaaacagatctgctgattttc
tgtgtgtcctgcagtcaccctatcaacccaaaagtggcattgcgacacatggagagatgt
tatgctaagtatgagagccagacttcttttggttccatgtacccaactaagatcgaagga
gcaacaagactgttctgtgatgtgtacaatccccagagcaagacctactgcaagaggctt
caggtcttgtgcccagagcattccagggacccaaaggtcccaggggatgaggtgtgcggc
tgtcctctggtccgtaatgtgtttgaggtgacgggagagcactgcagggtttctaagcgc
aaatgtaataagcactacaactgggagaagctcagaagagccgaggtggacctggagcgt
gtccgagtgtggtacaaactagacgagctctttgagcaggagcgcaacatgaggactgct
atgaccaacagggcaggtctacttgctctcatgctgcaccaaaccattcagcatgaccca
ctgacaacggatctccgttgcaacaaggacagatag
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