Oncorhynchus kisutch (coho salmon): 109890957
Help
Entry
109890957 CDS
T09179
Name
(RefSeq) DEP domain-containing mTOR-interacting protein isoform X1
KO
K20402
DEP domain-containing mTOR-interacting protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04140
Autophagy - animal
oki04142
Lysosome biogenesis
oki04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109890957
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
109890957
04140 Autophagy - animal
109890957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109890957
Membrane trafficking [BR:
oki04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
109890957
mTORC2 complex
109890957
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEP
PDZ_6
PDZ
CXorf58_MFI
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109890957
NCBI-ProteinID:
XP_020338730
Ensembl:
ENSOKIG00005000996
LinkDB
All DBs
Position
LG5:complement(34796000..34801439)
Genome browser
AA seq
407 aa
AA seq
DB search
MEKMGSSINRKSMARLHKAKVMIAGEQLRLRLHDGKLIKDRRYHLRTYPNCFVAKELTDW
LISNKEAPDQAAAVCLMQHLMDHDIVHHVCDKHPIFKDAKLLYRFRKDDGTFPFNTEVKV
FIRGQRLYEHLITGRDSILQLREEQGVAYQRSIPGCQLMDWLLQNGETESRRQGLEFCRA
LLEHGIIQHVSKKYDFFDSRLLYQFCINFRRRRHLSELLNETDRDKKEGASVHALEDNHA
DSPFVLPKIPPQEESSGFQSAMQPNKPLKMIPNVHQANLNSLQLHASGYLPPATLSSAPV
VRCNPKSVLKRNVTCEELLSPGAPFIKRVLTVMGDAVGWGFVIRGVAPVYVQAVDPGSPA
AAAGVKVRQFVCQVNGRSVLHLDYRQVTRLVMTGPHTVVLEVMEPLG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatgggaagcagcataaacagaaaatcaatggccagactgcacaaggctaaa
gttatgattgctggagaacaactgaggttgaggctgcatgatggcaaactgatcaaggat
cgacggtaccatctgcgcacttaccccaactgctttgtagccaaagagcttacagactgg
ttgatcagcaacaaggaagctcccgatcaggccgcagcggtctgcctcatgcaacacctg
atggaccatgacattgtgcaccatgtttgtgacaagcaccctatattcaaggatgcaaaa
ttgctgtaccgtttccgtaaggatgatggcacatttccatttaacaccgaggtgaaggtc
ttcatccgaggacaacgattgtatgagcatctaataacaggcagagactccattctgcaa
ctaagggaggagcagggtgttgcataccagcgctccatccctggctgccaattgatggac
tggttgttacagaatggagagacggagagtaggcgccagggtttggagttctgccgtgct
ttgctagagcatggcatcattcagcatgtgtcaaagaagtacgacttctttgacagtaga
ttactgtatcagttctgcatcaattttcgccgccggcgccacctgtctgagctcttgaat
gaaactgatcgagacaaaaaggaaggtgcatcagtgcatgcactggaggacaaccatgcc
gacagcccctttgtcctgcccaagatccccccacaagaggaaagcagtggttttcaatct
gcaatgcagcccaataaaccattgaagatgatacccaatgtgcatcaggccaatttgaac
tctctgcagctacatgctagtggatatttaccccctgccacactctcctctgccccagtg
gtgagatgcaatccaaaatcagtgcttaagaggaatgtaacatgtgaggagctactgtcc
cctggtgcacccttcatcaagagagtgttgacggtgatgggagatgcagtgggctggggc
tttgtgatcagaggtgtggctccagtttacgtgcaggcagtcgatcctggaagccctgct
gctgctgcaggggttaaggtgcgtcagtttgtgtgccaggtgaatgggcggagcgttctt
cacctggattaccgccaggtcaccaggttggtgatgaccggacctcacactgttgtgttg
gaggtcatggaaccactggggtga
DBGET
integrated database retrieval system
