Oncorhynchus kisutch (coho salmon): 109891009
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Entry
109891009 CDS
T09179
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04110
Cell cycle
oki04218
Cellular senescence
oki04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109891009 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109891009 (rbl1)
04218 Cellular senescence
109891009 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109891009 (rbl1)
Transcription factors [BR:
oki03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
109891009 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
109891009
NCBI-ProteinID:
XP_020338835
Ensembl:
ENSOKIG00005014566
UniProt:
A0A8C7FZD1
LinkDB
All DBs
Position
LG1:complement(57032317..57081359)
Genome browser
AA seq
1056 aa
AA seq
DB search
MRGDESDSDSGRTDESSVRKSLEMLCQELNMDEQTASEAMQNFKSIWNTYTLEGEVVHWL
ACSLYAACRKGSTPTVGKGVMEGNCVSLTRILRTSKLSLIQFFNKMKKWSDMSNLSQEFR
NRMGRLERTFEVSTVIFRKFEPIFMDMFQDPQGEPPRQPRSRKHRRLPCHVSDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCSNRKDLVNPLFKGMPSIFRLENN
TPDEPPCVIDRLCELHDGLVVEAKGIKEHYFKPYIKRLFERQILKGNEELLTDLLDTPNF
IDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKAAPEPRACQLSARMQVESNL
QQHFEKKRTLAPSTPLTGRRYLKEKELLVTPVSSATQSVSRLQSMVSGLRSAPSEALMQI
FKSCSRDPIVAILSRVKTLSETFKQHYTKDSEELPGSHMDFAENRMKLAEILYYKILENV
MAQETRRLHGKDMAVLLEQDIFHCSLMACCLEVVLFAYSSQRTFPWIISIFKLRPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLECRAWTADSVLWEALEQAHNKVPTVEEVNFPS
SFDTGNSSAGPSHLPLVALSPIIHPRIREFRTGLSSARKDIPPSPLSVHDRYSSPAAGSA
KRRLFGDDSSSQAQQSPSLAKRLMFTPGGTLKIDTPTILNMTTANGQQLSIPLQGIKNDL
GGITLIQVQTRGEPGSPITAQVLLTASPSRPIPAPQAQPDPQQSRPRRTGSLALFFRKVY
HLASVRLRDLCVRLDISAELRGKIWTCFEHSIVQCPELMKDRHLDQLLLCSIYIISKITK
EGHTFQDIMKCYRSQPQASSHVYRSVLIRPSSTREQPSDENMEVDPSGGTSLISAAEKAD
QNSGEEALAQGEERGDLIQFYNSVYVLKIKGFALRYAAPSMDNRMEAPPLSPFPSMRAQP
LSPRRISQRHSIYVSPHKNGSCLTPNSAYTYKINGSPSKELTDINRMIRQGGVSRKRAFS
MEGDYLGESPTKRVCPESEDVLLKRLQDVVSERAHH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagacgagtcagattccgactccgggcggacggacgagagctccgtccgaaag
agcttggaaatgctttgtcaggagctgaatatggacgaacagacggcatctgaagccatg
caaaacttcaagtcgatttggaatacatacacactggagggggaagtagttcattggcta
gcctgctctctctatgcagcctgcagaaagggttccacacccactgtgggtaagggggtg
atggaaggcaactgtgtgtccctgactcgaatactcaggacgtcaaaactgagtttgatt
cagttcttcaacaagatgaagaaatggtcggatatgtccaacttatctcaggaatttcgg
aatcgcatgggccgcctggagagaacctttgaagtgtcaactgtgatctttcggaagttt
gagcccatattcatggacatgttccaggatcctcaaggggagcccccacgacagcctaga
agcagaaaacacaggcgcctgccctgtcacgtcagcgatgtattcaaattctgctggacc
ctgtttgtgtacactaaaggaaatttccgtatgattggcgatgacttggtgaactcatac
cacctcctgctctgctgcttggacttggtgtttggaaatgccctgctatgctccaacagg
aaagaccttgtcaacccacttttcaaaggcatgcccagcatcttcaggttggaaaacaac
accccggacgagccgccatgtgtcatcgatcggctgtgtgagctacacgacggcttggtg
gtggaggctaagggcatcaaggagcactacttcaagccctacattaaaaggctctttgag
cggcagatacttaaagggaatgaggagctgctcactgatcttctggacacaccaaatttc
atagataacaataaagcaataaaccgggagtatgaggagtatgtgctgactgtgggggac
tttgacgagagggtgttcctgggggcggatgccgatgaggagatcgggacacccaggaag
gctgcaccagaaccccgggcctgccagctgtcagcccgcatgcaggtggagagcaacctg
caacagcactttgagaagaagcgcaccctggccccctccactcctctgacaggcaggcgt
tacctgaaggagaaggagctactggtgacccctgtgtcctcggccacgcaaagcgtcagc
cgactccagagcatggtctcgggcctgcgtagcgcccccagcgaggccctgatgcagata
ttcaagtcatgttcgcgggaccccatcgtagccattctgagcagagtgaaaaccctgagc
gagacgttcaagcaacattacacaaaggactcagaggagctgcctggatcacacatggat
tttgctgagaacaggatgaagctggctgaaatcctctattacaagatccttgagaacgtc
atggcccaagagacaaggaggctacatggcaaagacatggctgtgctgctggagcaggac
atcttccactgctctctgatggcctgctgtctggaggtggtgctgtttgcctacagctcc
cagcgcaccttcccctggatcatcagcatcttcaaactacgaccgttctacttcttcaag
gtgattgaggtgttcatccgctcggaagagggtctgtcccgggacatggtgaagcacctg
aactccatcgaagagcaggtgctggagtgccgggcctggacagcagactctgtgctgtgg
gaggccctggagcaggctcacaacaaggtccccaccgtggaggaggtgaacttccccagt
agttttgacacggggaacagcagtgctggtccctcccacctccctctggtggccctctcc
cccatcatccaccctcgcatccgcgagtttaggacgggcctgagcagcgcacgcaaagac
attcctccgtcgcccttatccgtccacgaccgttacagctccccggcggcaggcagtgcc
aagaggcgtctgtttggggacgacagcagcagccaggcccagcagtctccgtcccttgcc
aagaggctcatgttcacacccggcgggacgctgaagatcgacactcccaccatactcaat
atgaccacagccaacggccagcagctcagcatcccactgcaaggtataaagaatgatctg
ggaggcatcacgctgatccaggtacagaccagaggggagcctggcagtcccattacagcc
caggtcctcttgacagcctcccccagccggcccatcccggcaccccaggcccagccagac
ccccaacagagccggccccgacgcaccggctccttggccctcttcttcaggaaggtgtac
cacctggccagtgtacggctgagagatctgtgcgttaggctggacatctcggcagagctg
cggggcaagatctggacttgctttgagcactccatcgtccagtgtccggagctgatgaaa
gacagacacctggaccagctcctcctttgctccatctacataatctctaagattacgaaa
gaaggccacacattccaggacatcatgaaatgttaccgcagtcaaccacaagccagcagt
catgtctaccgcagtgtcctcatccgacccagcagcaccagagaacagccctcagacgag
aacatggaagtggacccctctggtggaacatccttaatttcagctgctgagaaagccgac
cagaacagcggagaggaggctcttgcccaaggcgaggagcgcggcgacctcatccagttc
tacaactctgtctatgtgctgaagattaagggctttgccctccgatacgccgcccccagc
atggacaacaggatggaagcccctcctctgtccccgttcccctcgatgagagcccagccc
ctgtccccccgccgcatctctcagagacactcgatctacgtgtccccacacaagaacggc
tcctgtctcaccccgaactctgcctacacctacaagatcaacggcagcccctccaaagaa
ctgactgacatcaaccggatgatccgccagggcggggtgagcaggaaaagggccttttcc
atggagggcgactacttgggcgagtcccccaccaaacgggtgtgtcccgagagcgaggat
gtgctgctcaaacggctgcaggacgtggtcagcgagagagcccaccactga
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integrated database retrieval system
