Oncorhynchus kisutch (coho salmon): 109891048
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Entry
109891048 CDS
T09179
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109891048
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109891048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
109891048
NCBI-ProteinID:
XP_031680955
Ensembl:
ENSOKIG00005046539
LinkDB
All DBs
Position
LG5:complement(42106153..42144091)
Genome browser
AA seq
2057 aa
AA seq
DB search
MPGSLSNEDEGQEDMDFEDEIPDEDEDGQRNTVPLTPLDSYFTDNDSLKQQKKKKPKKMK
EGKMPKVKKRKKEGGGGGGVGGGGSDLKEQIPEREDDRPLQGPEIGSESESSTYAPTTKK
KKKPKDKKEKKPKRKKREEEEEDDDDDDDEDDENNKEPKSSSQLMQEWGLEDVQYGFTEE
DYTTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVAAAV
AAAVETVTVASPTSVKEITTLSSSQPGQIRKAKTKEGKGPGVRRKTKTVKEVKKKSKGRK
TKSKKKASSSEEDFGLEESDFDDVSIHSASVRSDTSGNAKKKARKGRKKRKREDGDGYET
DHQDYCEVCQQGGEIILCDTCPKAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDD
DEEEEVAVEEEDDHLEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCM
CPPPKGKVQRILHWIWGDPPLPTEVPPGPDGETVDPLVKPPLKGHPERELFVKWAGLSYW
HCSWVSELQLELYHAVMYRNYQRKNDMDEPPPYDYGSGEEELNNEKRKSKDPEYAAMEER
FYRYGIKPEWMVIHRILNHSYDKDGDVHYLIKWRDLPYDQCTWEVDDFDVPEYHNAKHSY
WDHREQMIGDDQRPLVVRKGKKGKEEEKRREREIPPNAPIIDPTIKFEHQPWYINATGGT
LHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLS
TIINWEREFEMWAPDFYVVTYTGDKESRAVIRENEFTFEDSAVKTGRKVFRMKKDTAIKF
HVLLTSYELITIDQTILGSINWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPL
QNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKN
MPSKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLF
PVAAVEAPVLPNGSYDGNQLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDF
LEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYD
SDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGS
KTGSMSKQELDDILKFGTEELFKDEMEAAARAMGSHQKLCKNNGDIKDGDEGSVIHYDDN
AISKLLDRSQNATEDTEIQNMNEYLSSFKVAQYVVKDEDAEEEPQREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDDLSDNHSEYSVGSEDED
EDFEERPEGGRRHSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMP
PQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLT
RIGVMSLVRKKVQEFEHVNGKYSTPDLIPIGLELKKLTESLSSDPNTPVPASPAATPQPP
GSPVPPEKMDSISGPAEDKEPTEQECKNLPELETHVSTESSSQVEKTDIAPDSDETEKGS
TEDKPVSSEESSEMTDIPSALIEPSINPKEPPSIQTELLSNQSSPKAEPCRETEKSLEKG
DSDPAPTKPEEKELNPVVSDEVKSEDLLVPEGRLNGEKETQEEMEEVRRELLEKNGFKMR
FMFNIADGGFTELHTLWQNEERAAVSSGKMYDIWHRRHDYWLLAGIVTHGYARWQDIQND
PRYAIHNEPFKTEMHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPA
MALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKGLSSPSVYTAAGLKHCLQTQDLV
LNQLEELLSDMKADVTRLPNMLSRIPPVSSRLQMSERSILSRLTSRGNEPPPQQPFGQGS
FACSQMYSTGFGGSFRGPAGEAMVNYSQMPLGPYVSVSNGPPPPSSHLDKKSCDHLRHVT
TPDLKSGKPSDVICIED
NT seq
6174 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtcgttaagcaatgaagacgagggacaagaggacatggattttgaagacgaa
ataccagatgaggatgaggatggtcaacgtaacactgtcccgctcacacctctggacagc
tatttcactgacaacgactccctcaaacaacagaagaagaagaaacccaaaaagatgaag
gagggcaagatgcccaaagtcaagaagaggaaaaaggagggaggaggaggtggaggagtc
ggaggtggtggcagtgacttgaaggagcagatccctgagcgggaggatgaccgtccactg
cagggtccagagattggctcagagagcgagagcagcacctacgcccctaccacaaagaag
aagaagaaacctaaggataagaaagagaagaaacccaaacggaagaagagagaagaggag
gaggaggatgacgatgatgatgatgacgaagatgatgaaaataataaggagcccaagtcg
tccagtcagctgatgcaggagtggggtctggaggatgtgcagtatggcttcacagaggag
gactatacaaccctcaccaactacaaggccttcagccagttcctcaggccacttattgcc
aagaagaaccctaagatccccatgtcaaagatgatgacagtgttaggggccaagtggcga
gagttcagcgctaacaaccccttcaaaggcacctctgcaactgctgtggctgctgcggtg
gctgctgccgtggaaacggtcaccgttgcctcgcccacctctgtcaaagagatcactaca
ctgtcaagctctcagcctgggcaaatcagaaaagccaaaaccaaagagggaaaggggcct
ggggttcgacggaaaacaaagactgtaaaggaggtaaagaagaaaagtaaagggaggaag
accaaatcaaagaagaaagcctcctcgagtgaggaggactttgggctggaggagtcggac
tttgatgatgtcagcatccacagtgcctcggtgcgctctgatacctcggggaatgccaag
aagaaagcccggaagggtcggaaaaaaaggaaaagagaggatggggacggctatgagaca
gaccaccaggactactgtgaggtgtgccagcagggaggggagatcatcctgtgtgacacc
tgtcccaaagcctatcacctggtgtgtctggaccctgagctggagaaagctcccgagggc
aagtggagctgcccccactgtgagaaggagggcatccagtgggaggccaaagatgatgac
gatgaggaagaggaggttgcggttgaggaagaggacgaccacctggagttctgcagagtg
tgtaaagacggaggggagctgctgtgctgtgacacctgcccctcctcctaccatatccac
tgcctcaacccgccactgcctgagatacccaatggggagtggctgtgcccacgctgtatg
tgcccacctccaaaggggaaggtacagagaattctccactggatttggggggaccccccc
ttaccaactgaggtgccccctggccccgatggagagactgtggacccgctggtaaagcct
cccctgaagggccacccggagagggagctgtttgtcaagtgggctggtctctcctactgg
cactgctcctgggtcagtgaactgcagttggaactgtaccacgcggtgatgtaccgtaac
taccagaggaagaacgacatggacgagccccctccgtacgactacggctctggggaggag
gagctgaacaacgagaagaggaagagtaaagacccagagtacgctgccatggaggagaga
ttctaccgctacggcatcaagccagagtggatggtcatccacaggatcctcaaccacagt
tatgataaggatggggatgtgcactacctgatcaagtggagagacctgccctatgaccag
tgcacctgggaggtggatgactttgacgtccctgagtatcacaacgccaaacactcctac
tgggaccacagggagcagatgattggtgacgaccagcgccctttagtggtgagaaaggga
aagaagggcaaagaggaggagaagaggagggagagagaaatccctcctaacgctccaatc
atagatcctaccatcaagtttgaacatcaaccgtggtacatcaatgccactgggggaacc
ctacacccgtaccagctggaggggttgaactggctgcggttctcctgggcacagggcaca
gacactatcctggcagacgagatgggtctgggcaagactgtccagaccatcgtgttcctc
tactcactctacaaggagggtcactccaaagggccatacctggtcagtgcccccctgtcc
accatcatcaactgggagagggagtttgagatgtgggccccagacttctacgtggtgacc
tacactggggacaaagaaagccgggcggtcatccgggagaacgagttcaccttcgaggac
agtgcggtcaaaacaggccgcaaggtcttccgtatgaagaaagacacggccatcaagttc
catgtgttgctgacgtcatatgagctaatcaccatcgatcagaccattctgggctccatt
aactgggcctgtctagtggtggacgaggcccacagactgaagaacaaccagtcaaagttt
ttcagaattctcaatgggtataagatctactataagctgctactgactggcactcctctg
cagaacaacctggaggagctgtttcacctgctcaacttcctcaccccagagagattcaat
aacctggaggggttcctggaggagtttgcagacatctccaaggaggaccagatcaagaag
ctgcatgatctgctgggcccacacatgctcaggagactaaaggctgatgtcttcaagaac
atgccttccaagacagagctcattgtacgagtggagctcagccccatgcagaagaagtac
tacaagtttatcctgacgcggaactttgaggcactcaactccaagggcgggggcaaccag
gtgtccctgctcaacatcatgatggacctgaagaagtgctgcaaccacccctatctgttc
cccgtggcagccgtggaggcaccagtgttacccaatggctcttatgatgggaaccagctg
gtcaagtcctcaggcaaactcaccctgctccagaagatgctgaagaaactcaaagatgaa
ggacacagagttctcatcttctcccagatgactaagatgctggatctgcttgaggacttt
ctggaatacgagggctacaaatatgaacgcattgatggaggcatcacagggggactacga
caggaggctatcgaccgcttcaacgcaccgggtgcacagcagttctgcttcctgctctcc
acccgagctggaggcttgggcatcaacctggccacggcagacaccgtcatcatctacgac
tcagactggaaccctcacaacgatatccaggcattcagcagggcccaccgtataggtcag
aataagaaggtgatgatctatcgctttgtgacgcgagctagcgtggaggagcgcatcacc
caggtggccaagaggaagatgatgctgactcacctggtggtgaggcccggcctgggctcc
aagaccggctccatgtccaaacaggagctggacgacatcctcaagttcggcaccgaggag
ctcttcaaggacgagatggaggcagctgcacgggccatgggttcgcatcaaaaactctgt
aagaataatggggacataaaggatggagatgagggcagtgtcattcactatgatgacaat
gccatctccaagctgctggaccgtagccagaatgccacggaggacactgagatccagaac
atgaacgaatacctcagctccttcaaggtggcccagtatgttgtcaaagacgaggacgca
gaggaggagccccagcgggagatcattaagcaggaggagaatgtggatccagactactgg
gagaagctgctgaggcaccactacgagcagcagcaggaggacctggcccgcaacctgggc
aaaggcaaacgcatccgcaagcaggtcaactacaacgacacgtctcaggaggaccaagag
tggcaggatgatctttcagacaatcattccgagtactccgtggggtccgaggacgaggac
gaagatttcgaggagaggccggaaggtgggcgcaggcattctcgcaggcagctgaagagt
gacagggacaaacctctgccacccctgctggcacgcgtagggggcaacatcgaggtgctg
gggttcaacgcccgtcagcggaaggccttcctcaacgctatcatgcgctggggcatgcct
cctcaggacgccttcaactctcactggctggtcagagacctgagagggaaaagtgagaaa
gagttcagggcctacgtgtccctgttcatgagacatctttgtgagcccggggcagacggg
gcggagacctttgcagatggggttccacgagaagggctgtcccgtcagcatgtcctcacc
aggattggggttatgtctctggtcagaaaaaaggtccaggagtttgagcatgtcaatggg
aaatacagcactccagacctgatccctattggactggagctgaagaaactgactgagagt
ctgtcctctgaccccaacacccccgtccctgctagccctgctgccacaccccagcctcct
ggaagtcctgtcccaccagagaagatggactcgatctcagggcctgctgaagacaaggag
cccacagaacaggaatgcaagaacctaccagaactggagactcatgttagtacagagtca
tcatcccaggtagagaagacggacatcgctcctgacagtgatgagacagagaaaggcagc
acagaggacaaaccagtctcctcagaggagagtagtgaaatgacagacataccttccgca
ctgatagagccatccatcaatcctaaagagcctccatccatacagacagagctgttgtcc
aatcaaagctcaccaaaagcggagccctgtcgagagacagagaagtccttagaaaaagga
gacagtgatcctgctccaaccaaacctgaggagaaggaactgaatccagttgtttcagac
gaggtcaagagcgaggacttgctcgtgcccgagggacggctgaatggagaaaaagaaaca
caggaggagatggaggaggtcaggagggaattactggagaagaatggtttcaagatgagg
ttcatgttcaacattgccgacggaggcttcacagagctgcacaccctgtggcagaacgag
gagcgggctgccgtgtcatctgggaagatgtatgacatctggcaccgtcgccacgactac
tggctactggctggcatcgtaacacatggctatgcccgctggcaggacattcagaacgac
ccacgctatgccatccacaatgagcccttcaagactgagatgcacaagggaaattacctg
gagatgaagaacaagttcctggctcgtcgctttaagctgctggagcaggctctggtgata
gaggagcagttgaggagggcagcgtacctgaacatgacccaggaccccagccacccggcc
atggccctaaacactcgctttgctgaggtggagtgtctggctgagtctcaccagcacctg
tccaaggagtctctggctggaaacaagccagccaacgctgtgctgcacaaaggtctgtca
tctcccagtgtgtacacagcagcaggactaaaacactgtctacaaactcaagatctggta
ctgaaccagctggaggagctgttaagtgacatgaaggcggatgtgacgcggcttcccaac
atgttgtcccggatccccccagtgtcttcgcgtctgcagatgtctgagaggagcatcctc
agccgcctcaccagccgcggcaacgaacctccgccccaacagccgttcggccagggctca
tttgcctgttcccagatgtacagcactggctttgggggcagttttcgggggcctgcaggt
gaggccatggtcaactatagccagatgcccctgggaccctatgtcagtgtgtccaacggc
ccccctcctccatccagccacttggacaagaagtcctgcgaccacctgaggcatgtcacc
acccctgaccttaagtcaggcaagcccagtgatgttatctgtattgaagattag
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integrated database retrieval system
