Oncorhynchus kisutch (coho salmon): 109891068
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Entry
109891068 CDS
T09179
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109891068
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
109891068
NCBI-ProteinID:
XP_020338954
Ensembl:
ENSOKIG00005014837
UniProt:
A0A8C7M821
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Position
LG5:complement(43816333..43840562)
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AA seq
815 aa
AA seq
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MTPMYSIAVVWLFTYALCEDFCKNANFFCGAHTTFVNTPRPRESPVLSGHNLNKRSTDPD
GETCKSLTGFESTLKNNTHTYAFNDLSGSVSLAWVGDGTGVLLVLTTFQVPVFMIRLGQS
KLYRSEDYGKTFQDVTHLINNTFVQTEFGIAIGPDNSGRVIMTGDVSEGGGSRIFRSLDY
GHSFSPVDLPFFPLIQTLYNPNDSNVLLTLSITLDLWLSEDFGSTWRKIHDSVCLVRWGP
EDSIYFTTNSNGSCNDKGMLELKRSLDYGKNIKTIASKIYSFVLGGRFVFASIMTGSGTQ
RMIHVSVDGGDVWNMAQLPTVGHEQFYSILAASDDMVFMHVDEPGDTGIGTIYISDDRGT
LYSKSLERHLYTATGGDTDFTNVTSLRGVYMTSVLTEDGSVETVVSFDQGGEWRPVQRPR
NSRCDTETATNRPDRCSLHIHALYSISMKMNVPLLPLTQFNAIGLILAHGSVGDPASVLS
PDVYVSDDGGYSWLRALTGPHHYAILDSGGLLVAVEHTSAPVNQIKFSTDEGQCWHVYNF
TSEPLYFTGLALEPGAHSMNLSLWGYRVGLQGPLSHYWVSVTIDFKQLLSRDCGEGDYVQ
WLAHSDDLNNPNDGCILGYKERFLRLRKDSVCWNGRDYVITTQPTPCQCTLDDYQCDYGY
HRAENSSECVEQADLKGHVLEFCLHGTTEQLQTSGYRKIPGDRCVGGIQPKRKEIDLRRN
CISNALHPKPLTEANLLSSASIVLVVMVILLISAATGVMLVKKYVCGGRFLVHRYSVLQQ
HAEANGIEGVDELDTHTTEMGKTQYHEDSDEDLLE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgactccgatgtatagcatcgctgttgtctggttatttacctatgcgctatgcgaggat
ttttgtaagaatgccaacttcttctgcggggcacacacaacgttcgtgaataccccgcga
ccgagagagtcgccggtgttgtctggacacaaccttaacaaacggagcactgaccccgac
ggagagacgtgcaaatctctaacgggattcgagtccacgctgaaaaataacacacacacc
tatgccttcaatgacctgagtggctcagtgtctctggcctgggtgggagatggcacaggg
gtgcttctggtgctgaccacattccaggtgcctgtcttcatgattcgccttggccagtct
aaactctaccgcagcgaggactatggaaagacattccaggacgtgacccacctgatcaac
aacacctttgttcagactgagtttggcatcgccattggtcctgacaactctggcagggtg
atcatgacaggtgatgtgtcagagggagggggatcccggattttccgctcgctggattat
ggacatagtttttccccagtggacctccccttctttcctctgattcagacactgtataac
cccaacgacagtaacgtgctactgaccctcagcatcacgttggacctgtggctgtctgaa
gactttggctccacctggaggaagatccatgacagcgtgtgtctggtcagatggggtccc
gaggacagtatctacttcaccacaaactctaacggatcctgcaatgataagggcatgttg
gagctgaagaggtctctagactatggcaagaacatcaagaccatcgccagcaagatctac
tcctttgtacttggaggacgctttgtcttcgcctccatcatgactggctcgggtacccag
cgtatgatccatgtgtcggtagatggtggtgatgtgtggaacatggctcagctccctact
gttggccatgagcagttctactccatattggcagccagcgacgacatggtgttcatgcac
gtagacgaacctggagacactggcatagggaccatctacatatcagatgacagagggaca
ctctactccaagtctctggagcgccacctctacacggccacagggggcgacactgatttc
accaacgtcacctcgctcaggggtgtctacatgaccagcgtactcacagaggacggctca
gtggagactgtggtgtcgtttgaccaggggggggagtggcggccggtacaacggcctcga
aacagccgctgtgacactgagaccgccaccaaccggccggaccgatgcagcctgcacatc
cacgccttatacagcatctctatgaagatgaacgtccctctgctgcccctcacacagttc
aacgctataggcctcattctggctcatggtagtgtgggtgacccagcgtctgtgctgtct
cctgatgtgtatgtgtctgatgatggaggctactcctggctgagagcgctaaccggaccc
caccactacgccatcctagactctggaggccttttggtggctgtcgaacacacatctgca
cccgtcaaccagatcaagttttccacagacgagggccagtgttggcatgtgtataacttc
accagtgagccgctgtatttcacagggctggcgttggagcctggagcccactccatgaac
ctcagcctgtgggggtacagagtgggcctgcagggtcccctcagtcactactgggtctct
gttaccatcgacttcaaacagctactctccagagactgtggggagggggactatgttcag
tggttggcgcactctgatgacctcaacaaccccaatgacggatgcattctgggatataag
gagcgtttcctgcggctgaggaaagattctgtctgctggaacggacgtgattatgtcatc
accacccagcccaccccctgccaatgcacactggatgactaccagtgtgactatgggtac
caccgtgcagagaacagttctgagtgtgtggagcaggcagacctgaagggccatgttctg
gagttctgtcttcacggcaccacagaacagctgcagaccagtggctaccggaagattcca
ggcgaccggtgtgtaggcgggatccagcctaagaggaaggagattgatctgaggagaaac
tgcatcagcaatgcacttcacccaaaacccctgacggaggccaacttgttaagctctgcc
tctatagtactggttgtaatggtgattttgctcatcagcgctgccacaggagttatgctc
gtcaagaaatatgtctgcggagggaggttcctggtacacaggtactcagtgctacaacag
catgcagaggccaatgggatagagggagtggatgaactggacacacacaccaccgagatg
ggcaaaacacaataccacgaagactcagatgaggacctcttggagtga
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